RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 PROX2Q3B8N5 592 aa17.79■□□□□ 0.44
SMC4-209ENST00000468653 TCEAL6Q6IPX3 200 aa17.79■□□□□ 0.44
SMC4-209ENST00000468653 CBR4Q8N4T8 237 aa17.79■□□□□ 0.44
SMC4-209ENST00000468653 OR51Q1Q8NH59 317 aa17.79■□□□□ 0.44
SMC4-209ENST00000468653 MIPOL1Q8TD10 442 aa17.79■□□□□ 0.44
SMC4-209ENST00000468653 TCEAL3Q969E4 200 aa17.79■□□□□ 0.44
SMC4-209ENST00000468653 TAMM41Q96BW9 452 aa17.79■□□□□ 0.44
SMC4-209ENST00000468653 OTUB1Q96FW1 271 aaPredicted RBP17.79■□□□□ 0.44
SMC4-209ENST00000468653 C16orf58Q96GQ5 468 aa17.79■□□□□ 0.44
SMC4-209ENST00000468653 SLC29A1Q99808 456 aa17.79■□□□□ 0.44
SMC4-209ENST00000468653 DPYSL5Q9BPU6 564 aa17.79■□□□□ 0.44
SMC4-209ENST00000468653 IL1RAPQ9NPH3 570 aa17.79■□□□□ 0.44
SMC4-209ENST00000468653 NTMQ9P121 344 aa17.79■□□□□ 0.44
SMC4-209ENST00000468653 LRCH1Q9Y2L9 728 aa17.79■□□□□ 0.44
SMC4-209ENST00000468653 MAU2Q9Y6X3 613 aa17.79■□□□□ 0.44
SMC4-209ENST00000468653 MUC3AQ02505 3323 aa17.79■□□□□ 0.44
SMC4-209ENST00000468653 TTC28Q96AY4 2481 aa17.79■□□□□ 0.44
SMC4-209ENST00000468653 PDLIM1O00151 329 aa17.79■□□□□ 0.44
SMC4-209ENST00000468653 SOCS2O14508 198 aa17.79■□□□□ 0.44
SMC4-209ENST00000468653 OR10H2O60403 315 aa17.79■□□□□ 0.44
SMC4-209ENST00000468653 PDE9AO76083 593 aa17.79■□□□□ 0.44
SMC4-209ENST00000468653 FABP3P05413 133 aa17.79■□□□□ 0.44
SMC4-209ENST00000468653 ATXN8OSP0DMR3 200 aa17.79■□□□□ 0.44
SMC4-209ENST00000468653 MAGEA2P43356 314 aa17.79■□□□□ 0.44
SMC4-209ENST00000468653 HSPA13P48723 471 aa17.79■□□□□ 0.44
SMC4-209ENST00000468653 ZNF628Q5EBL2 1059 aa17.79■□□□□ 0.44
SMC4-209ENST00000468653 RPS26P11Q5JNZ5 115 aaPredicted RBP17.79■□□□□ 0.44
SMC4-209ENST00000468653 PPP4R4Q6NUP7 873 aa17.79■□□□□ 0.44
SMC4-209ENST00000468653 EPHX4Q8IUS5 362 aa17.79■□□□□ 0.44
SMC4-209ENST00000468653 OR2L13Q8N349 312 aa17.79■□□□□ 0.44
SMC4-209ENST00000468653 METTL25Q8N6Q8 603 aa17.79■□□□□ 0.44
SMC4-209ENST00000468653 MVB12AQ96EY5 273 aa17.79■□□□□ 0.44
SMC4-209ENST00000468653 MS4A4EQ96PG1 132 aa17.79■□□□□ 0.44
SMC4-209ENST00000468653 BTBD9Q96Q07 612 aa17.79■□□□□ 0.44
SMC4-209ENST00000468653 YIPF2Q9BWQ6 316 aa17.79■□□□□ 0.44
SMC4-209ENST00000468653 ACTRT3Q9BYD9 372 aa17.79■□□□□ 0.44
SMC4-209ENST00000468653 NTN4Q9HB63 628 aa17.79■□□□□ 0.44
SMC4-209ENST00000468653 PRTFDC1Q9NRG1 225 aa17.79■□□□□ 0.44
SMC4-209ENST00000468653 ZNF451Q9Y4E5 1061 aa17.79■□□□□ 0.44
SMC4-209ENST00000468653 TMEM184BQ9Y519 407 aaPredicted RBP17.79■□□□□ 0.44
SMC4-209ENST00000468653 R4GN57 208 aa17.79■□□□□ 0.44
SMC4-209ENST00000468653 ZNF749O43361 778 aa17.78■□□□□ 0.44
SMC4-209ENST00000468653 CTNSO60931 367 aa17.78■□□□□ 0.44
SMC4-209ENST00000468653 CDC123O75794 336 aaPredicted RBP17.78■□□□□ 0.44
SMC4-209ENST00000468653 SLITRK5O94991 958 aa17.78■□□□□ 0.44
SMC4-209ENST00000468653 PRSS23O95084 383 aa17.78■□□□□ 0.44
SMC4-209ENST00000468653 PGM3O95394 542 aa17.78■□□□□ 0.44
SMC4-209ENST00000468653 SEMG1P04279 462 aa17.78■□□□□ 0.44
SMC4-209ENST00000468653 ANKRD34CP0C6C1 535 aa17.78■□□□□ 0.44
SMC4-209ENST00000468653 SLC35E2P0CK97 266 aa17.78■□□□□ 0.44
SMC4-209ENST00000468653 KCNJ10P78508 379 aa17.78■□□□□ 0.44
SMC4-209ENST00000468653 STX4Q12846 297 aa17.78■□□□□ 0.44
SMC4-209ENST00000468653 ERV3-1Q14264 604 aa17.78■□□□□ 0.44
SMC4-209ENST00000468653 GNA13Q14344 377 aa17.78■□□□□ 0.44
SMC4-209ENST00000468653 FAM111BQ6SJ93 734 aa17.78■□□□□ 0.44
SMC4-209ENST00000468653 LGI4Q8N135 537 aa17.78■□□□□ 0.44
SMC4-209ENST00000468653 PACRGLQ8N7B6 248 aa17.78■□□□□ 0.44
SMC4-209ENST00000468653 SPPL2AQ8TCT8 520 aa17.78■□□□□ 0.44
SMC4-209ENST00000468653 TMBIM1Q969X1 311 aa17.78■□□□□ 0.44
SMC4-209ENST00000468653 ZNF501Q96CX3 271 aaPredicted RBP17.78■□□□□ 0.44
SMC4-209ENST00000468653 OR7D2Q96RA2 312 aa17.78■□□□□ 0.44
SMC4-209ENST00000468653 PDP2Q9P2J9 529 aa17.78■□□□□ 0.44
SMC4-209ENST00000468653 DHCR7Q9UBM7 475 aaKnown RBP17.78■□□□□ 0.44
SMC4-209ENST00000468653 CDC14AQ9UNH5 594 aa17.78■□□□□ 0.44
SMC4-209ENST00000468653 IGHV5-10-1A0A0J9YXX1 117 aa17.77■□□□□ 0.44
SMC4-209ENST00000468653 FAM86C2PA6NEL3 165 aa17.77■□□□□ 0.44
SMC4-209ENST00000468653 H0YJX3 145 aa17.77■□□□□ 0.44
SMC4-209ENST00000468653 hCG_2039718K7EN88 272 aa17.77■□□□□ 0.44
SMC4-209ENST00000468653 UQCRBP14927 111 aa17.77■□□□□ 0.44
SMC4-209ENST00000468653 XCR1P46094 333 aa17.77■□□□□ 0.44
SMC4-209ENST00000468653 ARSFP54793 590 aa17.77■□□□□ 0.44
SMC4-209ENST00000468653 ACY1Q03154 408 aa17.77■□□□□ 0.44
SMC4-209ENST00000468653 SYPL1Q16563 259 aa17.77■□□□□ 0.44
SMC4-209ENST00000468653 TRMT12Q53H54 448 aaKnown RBP17.77■□□□□ 0.44
SMC4-209ENST00000468653 PRAMEF17Q5VTA0 474 aa17.77■□□□□ 0.44
SMC4-209ENST00000468653 ARHGAP22Q7Z5H3 698 aa17.77■□□□□ 0.44
SMC4-209ENST00000468653 DOK4Q8TEW6 326 aa17.77■□□□□ 0.44
SMC4-209ENST00000468653 ZNF607Q96SK3 696 aa17.77■□□□□ 0.44
SMC4-209ENST00000468653 C8orf4Q9NR00 106 aa17.77■□□□□ 0.44
SMC4-209ENST00000468653 C19orf53Q9UNZ5 99 aaPredicted RBP17.77■□□□□ 0.44
SMC4-209ENST00000468653 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.76■□□□□ 0.43
SMC4-209ENST00000468653 A0A087WV62 115 aa17.76■□□□□ 0.43
SMC4-209ENST00000468653 ACOX3O15254 700 aa17.76■□□□□ 0.43
SMC4-209ENST00000468653 GALR2O43603 387 aaPredicted RBP17.76■□□□□ 0.43
SMC4-209ENST00000468653 ASNA1O43681 348 aa17.76■□□□□ 0.43
SMC4-209ENST00000468653 CRISP3P54108 245 aa17.76■□□□□ 0.43
SMC4-209ENST00000468653 VLDLRP98155 873 aa17.76■□□□□ 0.43
SMC4-209ENST00000468653 MAPK11Q15759 364 aa17.76■□□□□ 0.43
SMC4-209ENST00000468653 PRICKLE4Q2TBC4 344 aa17.76■□□□□ 0.43
SMC4-209ENST00000468653 IFI44LQ53G44 452 aa17.76■□□□□ 0.43
SMC4-209ENST00000468653 YOD1Q5VVQ6 348 aaPredicted RBP17.76■□□□□ 0.43
SMC4-209ENST00000468653 MFSD12Q6NUT3 480 aa17.76■□□□□ 0.43
SMC4-209ENST00000468653 SMYD1Q8NB12 490 aa17.76■□□□□ 0.43
SMC4-209ENST00000468653 RCBTB1Q8NDN9 531 aa17.76■□□□□ 0.43
SMC4-209ENST00000468653 ZNF675Q8TD23 568 aa17.76■□□□□ 0.43
SMC4-209ENST00000468653 ADAMTS15Q8TE58 950 aa17.76■□□□□ 0.43
SMC4-209ENST00000468653 SDCCAG3Q96C92 435 aa17.76■□□□□ 0.43
SMC4-209ENST00000468653 GIMAP5Q96F15 307 aa17.76■□□□□ 0.43
SMC4-209ENST00000468653 GFM1Q96RP9 751 aaKnown RBP17.76■□□□□ 0.43
SMC4-209ENST00000468653 MAT2BQ9NZL9 334 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms