RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 OLAHQ9NV23 265 aa13.49□□□□□ -0.25
COL27A1-203ENST00000468565 MS4A12Q9NXJ0 267 aa13.49□□□□□ -0.25
COL27A1-203ENST00000468565 COL12A1Q99715 3063 aa13.48□□□□□ -0.25
COL27A1-203ENST00000468565 GABRR3A8MPY1 467 aa13.48□□□□□ -0.25
COL27A1-203ENST00000468565 SAP18O00422 153 aaKnown RBP13.48□□□□□ -0.25
COL27A1-203ENST00000468565 PLPP1O14494 284 aa13.48□□□□□ -0.25
COL27A1-203ENST00000468565 UBDO15205 165 aa13.48□□□□□ -0.25
COL27A1-203ENST00000468565 MAN1A2O60476 641 aa13.48□□□□□ -0.25
COL27A1-203ENST00000468565 ERFP50548 548 aa13.48□□□□□ -0.25
COL27A1-203ENST00000468565 TRAF3Q13114 568 aa13.48□□□□□ -0.25
COL27A1-203ENST00000468565 SERTAD2Q14140 314 aa13.48□□□□□ -0.25
COL27A1-203ENST00000468565 ELAVL1Q15717 326 aaKnown RBP13.48□□□□□ -0.25
COL27A1-203ENST00000468565 GGTA1PQ4G0N0 100 aa13.48□□□□□ -0.25
COL27A1-203ENST00000468565 ZNF766Q5HY98 468 aa13.48□□□□□ -0.25
COL27A1-203ENST00000468565 ZNF324BQ6AW86 544 aaPredicted RBP13.48□□□□□ -0.25
COL27A1-203ENST00000468565 DHDDSQ86SQ9 333 aa13.48□□□□□ -0.25
COL27A1-203ENST00000468565 OR52B6Q8NGF0 335 aa13.48□□□□□ -0.25
COL27A1-203ENST00000468565 DNAJB8Q8NHS0 232 aa13.48□□□□□ -0.25
COL27A1-203ENST00000468565 PRR7Q8TB68 274 aa13.48□□□□□ -0.25
COL27A1-203ENST00000468565 WDR41Q9HAD4 459 aa13.48□□□□□ -0.25
COL27A1-203ENST00000468565 ANKRD33BA6NCL7 494 aa13.47□□□□□ -0.25
COL27A1-203ENST00000468565 AGFG2O95081 481 aa13.47□□□□□ -0.25
COL27A1-203ENST00000468565 RASAL1O95294 804 aa13.47□□□□□ -0.25
COL27A1-203ENST00000468565 CRYABP02511 175 aaKnown RBP13.47□□□□□ -0.25
COL27A1-203ENST00000468565 CPN2P22792 545 aa13.47□□□□□ -0.25
COL27A1-203ENST00000468565 CD96P40200 585 aa13.47□□□□□ -0.25
COL27A1-203ENST00000468565 GPR143P51810 404 aa13.47□□□□□ -0.25
COL27A1-203ENST00000468565 MLF1P58340 268 aa13.47□□□□□ -0.25
COL27A1-203ENST00000468565 NAA20P61599 178 aa13.47□□□□□ -0.25
COL27A1-203ENST00000468565 STX4Q12846 297 aa13.47□□□□□ -0.25
COL27A1-203ENST00000468565 STX5Q13190 355 aa13.47□□□□□ -0.25
COL27A1-203ENST00000468565 OR1C1Q15619 314 aa13.47□□□□□ -0.25
COL27A1-203ENST00000468565 CLYBLQ8N0X4 340 aa13.47□□□□□ -0.25
COL27A1-203ENST00000468565 TMEM132CQ8N3T6 1108 aa13.47□□□□□ -0.25
COL27A1-203ENST00000468565 HORMAD2Q8N7B1 307 aa13.47□□□□□ -0.25
COL27A1-203ENST00000468565 ZNF483Q8TF39 744 aaPredicted RBP13.47□□□□□ -0.25
COL27A1-203ENST00000468565 PYDC1Q8WXC3 89 aa13.47□□□□□ -0.25
COL27A1-203ENST00000468565 SCMH1Q96GD3 660 aa13.47□□□□□ -0.25
COL27A1-203ENST00000468565 NSUN5Q96P11 429 aaKnown RBP13.47□□□□□ -0.25
COL27A1-203ENST00000468565 CDK15Q96Q40 435 aa13.47□□□□□ -0.25
COL27A1-203ENST00000468565 SH3GL3Q99963 347 aa13.47□□□□□ -0.25
COL27A1-203ENST00000468565 MRPL1Q9BYD6 325 aaKnown RBP13.47□□□□□ -0.25
COL27A1-203ENST00000468565 DEFB126Q9BYW3 111 aa13.47□□□□□ -0.25
COL27A1-203ENST00000468565 TRIM45Q9H8W5 580 aaPredicted RBP13.47□□□□□ -0.25
COL27A1-203ENST00000468565 PHF11Q9UIL8 331 aa13.47□□□□□ -0.25
COL27A1-203ENST00000468565 FBXW2Q9UKT8 454 aa13.47□□□□□ -0.25
COL27A1-203ENST00000468565 HECTD1Q9ULT8 2610 aa13.47□□□□□ -0.25
COL27A1-203ENST00000468565 SPTBN1Q01082 2364 aaKnown RBP13.47□□□□□ -0.25
COL27A1-203ENST00000468565 TRBV11-1A0A0K0K1C0 115 aa13.47□□□□□ -0.25
COL27A1-203ENST00000468565 SEMA3DO95025 777 aa13.47□□□□□ -0.25
COL27A1-203ENST00000468565 TPP2P29144 1249 aaPredicted RBP13.47□□□□□ -0.25
COL27A1-203ENST00000468565 PPP2R1BP30154 601 aa13.47□□□□□ -0.25
COL27A1-203ENST00000468565 ARL1P40616 181 aaPredicted RBP13.47□□□□□ -0.25
COL27A1-203ENST00000468565 ATP4BP51164 291 aa13.47□□□□□ -0.25
COL27A1-203ENST00000468565 MRPS35P82673 323 aaKnown RBP13.47□□□□□ -0.25
COL27A1-203ENST00000468565 SLAMF1Q13291 335 aa13.47□□□□□ -0.25
COL27A1-203ENST00000468565 RPS27LQ71UM5 84 aaKnown RBP13.47□□□□□ -0.25
COL27A1-203ENST00000468565 OR14A16Q8NHC5 309 aa13.47□□□□□ -0.25
COL27A1-203ENST00000468565 NR4A3Q92570 626 aa13.47□□□□□ -0.25
COL27A1-203ENST00000468565 DAZLQ92904 295 aaKnown RBP13.47□□□□□ -0.25
COL27A1-203ENST00000468565 SIGLEC12Q96PQ1 595 aa13.47□□□□□ -0.25
COL27A1-203ENST00000468565 CDRT15Q96T59 188 aa13.47□□□□□ -0.25
COL27A1-203ENST00000468565 SORBS1Q9BX66 1292 aaKnown RBP13.47□□□□□ -0.25
COL27A1-203ENST00000468565 ZNF717Q9BY31 904 aaPredicted RBP13.47□□□□□ -0.25
COL27A1-203ENST00000468565 ALOXE3Q9BYJ1 711 aa13.47□□□□□ -0.25
COL27A1-203ENST00000468565 TNFRSF12AQ9NP84 129 aa13.47□□□□□ -0.25
COL27A1-203ENST00000468565 LYARQ9NX58 379 aaKnown RBP13.47□□□□□ -0.25
COL27A1-203ENST00000468565 ICE1Q9Y2F5 2266 aa13.46□□□□□ -0.25
COL27A1-203ENST00000468565 UBFD1O14562 309 aaKnown RBP13.46□□□□□ -0.25
COL27A1-203ENST00000468565 SEMA7AO75326 666 aa13.46□□□□□ -0.25
COL27A1-203ENST00000468565 ETHE1O95571 254 aa13.46□□□□□ -0.25
COL27A1-203ENST00000468565 OTCP00480 354 aa13.46□□□□□ -0.25
COL27A1-203ENST00000468565 FGF4P08620 206 aa13.46□□□□□ -0.25
COL27A1-203ENST00000468565 CD46P15529 392 aa13.46□□□□□ -0.25
COL27A1-203ENST00000468565 TRHRP34981 398 aaPredicted RBP13.46□□□□□ -0.25
COL27A1-203ENST00000468565 BSGP35613 385 aa13.46□□□□□ -0.25
COL27A1-203ENST00000468565 TDGF1P3P51864 188 aa13.46□□□□□ -0.25
COL27A1-203ENST00000468565 IGLV3-21P80748 117 aaPredicted RBP13.46□□□□□ -0.25
COL27A1-203ENST00000468565 TNFRSF17Q02223 184 aa13.46□□□□□ -0.25
COL27A1-203ENST00000468565 BIKQ13323 160 aa13.46□□□□□ -0.25
COL27A1-203ENST00000468565 PIGGQ5H8A4 983 aa13.46□□□□□ -0.25
COL27A1-203ENST00000468565 AP1ARQ63HQ0 302 aa13.46□□□□□ -0.25
COL27A1-203ENST00000468565 FRG2Q64ET8 278 aa13.46□□□□□ -0.25
COL27A1-203ENST00000468565 GPR180Q86V85 440 aa13.46□□□□□ -0.25
COL27A1-203ENST00000468565 TMEM178AQ8NBL3 297 aa13.46□□□□□ -0.25
COL27A1-203ENST00000468565 MORN4Q8NDC4 146 aa13.46□□□□□ -0.25
COL27A1-203ENST00000468565 NCLNQ969V3 563 aa13.46□□□□□ -0.25
COL27A1-203ENST00000468565 C5orf34Q96MH7 638 aa13.46□□□□□ -0.25
COL27A1-203ENST00000468565 FRG2BQ96QU4 278 aa13.46□□□□□ -0.25
COL27A1-203ENST00000468565 ECSITQ9BQ95 431 aa13.46□□□□□ -0.25
COL27A1-203ENST00000468565 DDX31Q9H8H2 851 aaKnown RBP13.46□□□□□ -0.25
COL27A1-203ENST00000468565 SEMA4BQ9NPR2 832 aaPredicted RBP13.46□□□□□ -0.25
COL27A1-203ENST00000468565 LRFN1Q9P244 771 aa13.46□□□□□ -0.25
COL27A1-203ENST00000468565 ZNF223Q9UK11 482 aaPredicted RBP13.46□□□□□ -0.25
COL27A1-203ENST00000468565 CLCA3PQ9Y6N3 262 aa13.46□□□□□ -0.25
COL27A1-203ENST00000468565 SPTAN1Q13813 2472 aaKnown RBP13.45□□□□□ -0.26
COL27A1-203ENST00000468565 USP9YO00507 2555 aaPredicted RBP13.45□□□□□ -0.26
COL27A1-203ENST00000468565 A0A0A6YYD5 115 aa13.45□□□□□ -0.26
COL27A1-203ENST00000468565 CFLARO15519 480 aa13.45□□□□□ -0.26
COL27A1-203ENST00000468565 LDB3O75112 727 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms