RNA–Protein interactions for RNA: ENST00000468385.1

PTPN7-207, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-207ENST00000468385 SNX15Q9NRS6 342 aa11.94□□□□□ -0.5
PTPN7-207ENST00000468385 LYARQ9NX58 379 aaKnown RBP11.94□□□□□ -0.5
PTPN7-207ENST00000468385 TEX10Q9NXF1 929 aaPredicted RBP11.94□□□□□ -0.5
PTPN7-207ENST00000468385 NUDT4Q9NZJ9 180 aa11.94□□□□□ -0.5
PTPN7-207ENST00000468385 ADGRE2Q9UHX3 823 aa11.94□□□□□ -0.5
PTPN7-207ENST00000468385 TSC22D4Q9Y3Q8 395 aa11.94□□□□□ -0.5
PTPN7-207ENST00000468385 A0A0A6YYD5 115 aa11.93□□□□□ -0.5
PTPN7-207ENST00000468385 UBXN8O00124 270 aa11.93□□□□□ -0.5
PTPN7-207ENST00000468385 GNB5O14775 395 aa11.93□□□□□ -0.5
PTPN7-207ENST00000468385 AIFM1O95831 613 aa11.93□□□□□ -0.5
PTPN7-207ENST00000468385 CT62P0C5K7 136 aa11.93□□□□□ -0.5
PTPN7-207ENST00000468385 SLC35E2BP0CK96 405 aa11.93□□□□□ -0.5
PTPN7-207ENST00000468385 SLC35E2P0CK97 266 aa11.93□□□□□ -0.5
PTPN7-207ENST00000468385 TMIGD3P0DMS9 266 aaPredicted RBP11.93□□□□□ -0.5
PTPN7-207ENST00000468385 NR2F6P10588 404 aa11.93□□□□□ -0.5
PTPN7-207ENST00000468385 PTPN6P29350 595 aa11.93□□□□□ -0.5
PTPN7-207ENST00000468385 SSTR1P30872 391 aa11.93□□□□□ -0.5
PTPN7-207ENST00000468385 BSGP35613 385 aa11.93□□□□□ -0.5
PTPN7-207ENST00000468385 PIK3CBP42338 1070 aa11.93□□□□□ -0.5
PTPN7-207ENST00000468385 RAB10P61026 200 aa11.93□□□□□ -0.5
PTPN7-207ENST00000468385 RPS13P62277 151 aaKnown RBP11.93□□□□□ -0.5
PTPN7-207ENST00000468385 DLG1Q12959 904 aa11.93□□□□□ -0.5
PTPN7-207ENST00000468385 TIGD3Q6B0B8 471 aa11.93□□□□□ -0.5
PTPN7-207ENST00000468385 ISCA2Q86U28 154 aa11.93□□□□□ -0.5
PTPN7-207ENST00000468385 ZNF615Q8N8J6 731 aa11.93□□□□□ -0.5
PTPN7-207ENST00000468385 STAG3L4Q8TBR4 150 aa11.93□□□□□ -0.5
PTPN7-207ENST00000468385 ZPLD1Q8TCW7 415 aa11.93□□□□□ -0.5
PTPN7-207ENST00000468385 MTERF1Q99551 399 aaKnown RBP11.93□□□□□ -0.5
PTPN7-207ENST00000468385 CPNE1Q99829 537 aa11.93□□□□□ -0.5
PTPN7-207ENST00000468385 CENPKQ9BS16 269 aa11.93□□□□□ -0.5
PTPN7-207ENST00000468385 RBM24Q9BX46 236 aaKnown RBP11.93□□□□□ -0.5
PTPN7-207ENST00000468385 TRIM31Q9BZY9 425 aa11.93□□□□□ -0.5
PTPN7-207ENST00000468385 DDX31Q9H8H2 851 aaKnown RBP11.93□□□□□ -0.5
PTPN7-207ENST00000468385 ZNF395Q9H8N7 513 aaPredicted RBP11.93□□□□□ -0.5
PTPN7-207ENST00000468385 CXorf21Q9HAI6 301 aa11.93□□□□□ -0.5
PTPN7-207ENST00000468385 GRPEL1Q9HAV7 217 aa11.93□□□□□ -0.5
PTPN7-207ENST00000468385 GALNT8Q9NY28 637 aa11.93□□□□□ -0.5
PTPN7-207ENST00000468385 OPTCQ9UBM4 332 aa11.93□□□□□ -0.5
PTPN7-207ENST00000468385 FETUBQ9UGM5 382 aa11.93□□□□□ -0.5
PTPN7-207ENST00000468385 FN1P02751 2386 aaKnown RBP11.92□□□□□ -0.5
PTPN7-207ENST00000468385 ANK3Q12955 4377 aaKnown RBP11.92□□□□□ -0.5
PTPN7-207ENST00000468385 DOCK7Q96N67 2140 aa11.92□□□□□ -0.5
PTPN7-207ENST00000468385 SUPT3HB4E1H0 165 aa11.92□□□□□ -0.5
PTPN7-207ENST00000468385 ERN1O75460 977 aaKnown RBP11.92□□□□□ -0.5
PTPN7-207ENST00000468385 SUPT3HO75486 399 aa11.92□□□□□ -0.5
PTPN7-207ENST00000468385 LY6G6DO95868 133 aa11.92□□□□□ -0.5
PTPN7-207ENST00000468385 FAM58BPP0C7Q3 252 aa11.92□□□□□ -0.5
PTPN7-207ENST00000468385 EPB42P16452 691 aa11.92□□□□□ -0.5
PTPN7-207ENST00000468385 GP5P40197 560 aa11.92□□□□□ -0.5
PTPN7-207ENST00000468385 TMED10P49755 219 aaKnown RBP11.92□□□□□ -0.5
PTPN7-207ENST00000468385 RPP38P78345 283 aaKnown RBP11.92□□□□□ -0.5
PTPN7-207ENST00000468385 FUT7Q11130 342 aa11.92□□□□□ -0.5
PTPN7-207ENST00000468385 RCAN2Q14206 197 aa11.92□□□□□ -0.5
PTPN7-207ENST00000468385 TOMM20Q15388 145 aa11.92□□□□□ -0.5
PTPN7-207ENST00000468385 HLA-DQA1Q5Y7H0 255 aa11.92□□□□□ -0.5
PTPN7-207ENST00000468385 TAOK1Q7L7X3 1001 aa11.92□□□□□ -0.5
PTPN7-207ENST00000468385 ADGRE4PQ86SQ3 457 aa11.92□□□□□ -0.5
PTPN7-207ENST00000468385 LUZP2Q86TE4 346 aa11.92□□□□□ -0.5
PTPN7-207ENST00000468385 YRDCQ86U90 279 aaKnown RBP11.92□□□□□ -0.5
PTPN7-207ENST00000468385 PRIMA1Q86XR5 153 aa11.92□□□□□ -0.5
PTPN7-207ENST00000468385 GALNT12Q8IXK2 581 aa11.92□□□□□ -0.5
PTPN7-207ENST00000468385 PRR22Q8IZ63 422 aa11.92□□□□□ -0.5
PTPN7-207ENST00000468385 FAM83FQ8NEG4 500 aaPredicted RBP11.92□□□□□ -0.5
PTPN7-207ENST00000468385 SLC44A1Q8WWI5 657 aa11.92□□□□□ -0.5
PTPN7-207ENST00000468385 SMPDL3BQ92485 455 aa11.92□□□□□ -0.5
PTPN7-207ENST00000468385 ISL2Q96A47 359 aa11.92□□□□□ -0.5
PTPN7-207ENST00000468385 TUBA1CQ9BQE3 449 aa11.92□□□□□ -0.5
PTPN7-207ENST00000468385 SFXN3Q9BWM7 321 aa11.92□□□□□ -0.5
PTPN7-207ENST00000468385 OR10A5Q9H207 317 aa11.92□□□□□ -0.5
PTPN7-207ENST00000468385 TXNDC16Q9P2K2 825 aa11.92□□□□□ -0.5
PTPN7-207ENST00000468385 NSD1Q96L73 2696 aaPredicted RBP11.91□□□□□ -0.5
PTPN7-207ENST00000468385 SH3D21A4FU49 640 aa11.91□□□□□ -0.5
PTPN7-207ENST00000468385 FAM171A2A8MVW0 826 aa11.91□□□□□ -0.5
PTPN7-207ENST00000468385 H0YIV9 168 aa11.91□□□□□ -0.5
PTPN7-207ENST00000468385 PGRMC2O15173 223 aa11.91□□□□□ -0.5
PTPN7-207ENST00000468385 KERAO60938 352 aa11.91□□□□□ -0.5
PTPN7-207ENST00000468385 RCBTB2O95199 551 aa11.91□□□□□ -0.5
PTPN7-207ENST00000468385 ACTL6AO96019 429 aa11.91□□□□□ -0.5
PTPN7-207ENST00000468385 ABCB1P08183 1280 aaPredicted RBP11.91□□□□□ -0.5
PTPN7-207ENST00000468385 CYP4B1P13584 511 aa11.91□□□□□ -0.5
PTPN7-207ENST00000468385 MTHFD2P13995 350 aa11.91□□□□□ -0.5
PTPN7-207ENST00000468385 TCP1P17987 556 aaKnown RBP11.91□□□□□ -0.5
PTPN7-207ENST00000468385 PTX3P26022 381 aaPredicted RBP11.91□□□□□ -0.5
PTPN7-207ENST00000468385 ABCD3P28288 659 aa11.91□□□□□ -0.5
PTPN7-207ENST00000468385 PTGDSP41222 190 aa11.91□□□□□ -0.5
PTPN7-207ENST00000468385 NRG3P56975 720 aa11.91□□□□□ -0.5
PTPN7-207ENST00000468385 CUL3Q13618 768 aa11.91□□□□□ -0.5
PTPN7-207ENST00000468385 SETDB1Q15047 1291 aa11.91□□□□□ -0.5
PTPN7-207ENST00000468385 Q5PR19 223 aa11.91□□□□□ -0.5
PTPN7-207ENST00000468385 LIPJQ5W064 366 aa11.91□□□□□ -0.5
PTPN7-207ENST00000468385 DESI1Q6ICB0 168 aa11.91□□□□□ -0.5
PTPN7-207ENST00000468385 OR52E8Q6IFG1 317 aa11.91□□□□□ -0.5
PTPN7-207ENST00000468385 CYP20A1Q6UW02 462 aa11.91□□□□□ -0.5
PTPN7-207ENST00000468385 PLXDC2Q6UX71 529 aa11.91□□□□□ -0.5
PTPN7-207ENST00000468385 CMC1Q7Z7K0 106 aa11.91□□□□□ -0.5
PTPN7-207ENST00000468385 CIARTQ8N365 385 aaPredicted RBP11.91□□□□□ -0.5
PTPN7-207ENST00000468385 VWA5B2Q8N398 1253 aa11.91□□□□□ -0.5
PTPN7-207ENST00000468385 TEX9Q8N6V9 391 aa11.91□□□□□ -0.5
PTPN7-207ENST00000468385 C17orf47Q8NEP4 570 aa11.91□□□□□ -0.5
PTPN7-207ENST00000468385 OR1J4Q8NGS1 313 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms