RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 TP53INP1Q96A56 240 aa19.31■□□□□ 0.68
COL9A3-207ENST00000467819 MRPL1Q9BYD6 325 aaKnown RBP19.31■□□□□ 0.68
COL9A3-207ENST00000467819 RYDENQ9NUL5 291 aaKnown RBP19.31■□□□□ 0.68
COL9A3-207ENST00000467819 PRRC2AP48634 2157 aaKnown RBP19.31■□□□□ 0.68
COL9A3-207ENST00000467819 ANKRD33BA6NCL7 494 aa19.3■□□□□ 0.68
COL9A3-207ENST00000467819 ACSL3O95573 720 aa19.3■□□□□ 0.68
COL9A3-207ENST00000467819 KLK1P06870 262 aa19.3■□□□□ 0.68
COL9A3-207ENST00000467819 NT5EP21589 574 aa19.3■□□□□ 0.68
COL9A3-207ENST00000467819 PHBP35232 272 aa19.3■□□□□ 0.68
COL9A3-207ENST00000467819 KIR2DL3P43628 341 aa19.3■□□□□ 0.68
COL9A3-207ENST00000467819 TMED10P49755 219 aaKnown RBP19.3■□□□□ 0.68
COL9A3-207ENST00000467819 IST1P53990 364 aa19.3■□□□□ 0.68
COL9A3-207ENST00000467819 CRYZQ08257 329 aaKnown RBP19.3■□□□□ 0.68
COL9A3-207ENST00000467819 ACSF3Q4G176 576 aaPredicted RBP19.3■□□□□ 0.68
COL9A3-207ENST00000467819 FRG2Q64ET8 278 aa19.3■□□□□ 0.68
COL9A3-207ENST00000467819 METTL2BQ6P1Q9 378 aaKnown RBP19.3■□□□□ 0.68
COL9A3-207ENST00000467819 ZNF615Q8N8J6 731 aa19.3■□□□□ 0.68
COL9A3-207ENST00000467819 NAXEQ8NCW5 288 aa19.3■□□□□ 0.68
COL9A3-207ENST00000467819 TNIP2Q8NFZ5 429 aa19.3■□□□□ 0.68
COL9A3-207ENST00000467819 SPPL2AQ8TCT8 520 aa19.3■□□□□ 0.68
COL9A3-207ENST00000467819 NSUN5Q96P11 429 aaKnown RBP19.3■□□□□ 0.68
COL9A3-207ENST00000467819 FRG2BQ96QU4 278 aa19.3■□□□□ 0.68
COL9A3-207ENST00000467819 GPATCH1Q9BRR8 931 aaKnown RBP19.3■□□□□ 0.68
COL9A3-207ENST00000467819 POLDIP3Q9BY77 421 aaKnown RBP19.3■□□□□ 0.68
COL9A3-207ENST00000467819 OR10A5Q9H207 317 aa19.3■□□□□ 0.68
COL9A3-207ENST00000467819 ZDHHC18Q9NUE0 388 aa19.3■□□□□ 0.68
COL9A3-207ENST00000467819 NINJ2Q9NZG7 142 aa19.3■□□□□ 0.68
COL9A3-207ENST00000467819 ABCA4P78363 2273 aa19.29■□□□□ 0.68
COL9A3-207ENST00000467819 CTAG2O75638 210 aa19.29■□□□□ 0.68
COL9A3-207ENST00000467819 CDK9P50750 372 aaKnown RBP19.29■□□□□ 0.68
COL9A3-207ENST00000467819 XKP51811 444 aa19.29■□□□□ 0.68
COL9A3-207ENST00000467819 NRG3P56975 720 aa19.29■□□□□ 0.68
COL9A3-207ENST00000467819 ETF1P62495 437 aaKnown RBP19.29■□□□□ 0.68
COL9A3-207ENST00000467819 FUT7Q11130 342 aa19.29■□□□□ 0.68
COL9A3-207ENST00000467819 TOMM20Q15388 145 aa19.29■□□□□ 0.68
COL9A3-207ENST00000467819 SGO1Q5FBB7 561 aa19.29■□□□□ 0.68
COL9A3-207ENST00000467819 C8orf74Q6P047 294 aa19.29■□□□□ 0.68
COL9A3-207ENST00000467819 ADIPOR1Q96A54 375 aa19.29■□□□□ 0.68
COL9A3-207ENST00000467819 GNRHR2Q96P88 292 aa19.29■□□□□ 0.68
COL9A3-207ENST00000467819 TIMP4Q99727 224 aa19.29■□□□□ 0.68
COL9A3-207ENST00000467819 ANGPTL4Q9BY76 406 aa19.29■□□□□ 0.68
COL9A3-207ENST00000467819 CRIM1Q9NZV1 1036 aa19.29■□□□□ 0.68
COL9A3-207ENST00000467819 PCTPQ9UKL6 214 aa19.29■□□□□ 0.68
COL9A3-207ENST00000467819 CAMK2AQ9UQM7 478 aa19.29■□□□□ 0.68
COL9A3-207ENST00000467819 SLC6A5Q9Y345 797 aa19.29■□□□□ 0.68
COL9A3-207ENST00000467819 AHRRA9YTQ3 701 aa19.28■□□□□ 0.68
COL9A3-207ENST00000467819 DVL2O14641 736 aa19.28■□□□□ 0.68
COL9A3-207ENST00000467819 SNX4O95219 450 aa19.28■□□□□ 0.68
COL9A3-207ENST00000467819 EPPINO95925 133 aa19.28■□□□□ 0.68
COL9A3-207ENST00000467819 CPMP14384 443 aa19.28■□□□□ 0.68
COL9A3-207ENST00000467819 KRT15P19012 456 aa19.28■□□□□ 0.68
COL9A3-207ENST00000467819 ASCL1P50553 236 aa19.28■□□□□ 0.68
COL9A3-207ENST00000467819 IFT88Q13099 833 aa19.28■□□□□ 0.68
COL9A3-207ENST00000467819 TRAF3Q13114 568 aa19.28■□□□□ 0.68
COL9A3-207ENST00000467819 NNATQ16517 81 aa19.28■□□□□ 0.68
COL9A3-207ENST00000467819 CCNYL2Q5T2Q4 361 aa19.28■□□□□ 0.68
COL9A3-207ENST00000467819 FNDC7Q5VTL7 733 aa19.28■□□□□ 0.68
COL9A3-207ENST00000467819 PAGE2Q7Z2X7 111 aa19.28■□□□□ 0.68
COL9A3-207ENST00000467819 ZNF572Q7Z3I7 529 aaPredicted RBP19.28■□□□□ 0.68
COL9A3-207ENST00000467819 PACS2Q86VP3 889 aa19.28■□□□□ 0.68
COL9A3-207ENST00000467819 NTMT1Q9BV86 223 aa19.28■□□□□ 0.68
COL9A3-207ENST00000467819 UBQLN3Q9H347 655 aa19.28■□□□□ 0.68
COL9A3-207ENST00000467819 ACSS3Q9H6R3 686 aa19.28■□□□□ 0.68
COL9A3-207ENST00000467819 ZBTB26Q9HCK0 441 aa19.28■□□□□ 0.68
COL9A3-207ENST00000467819 XPR1Q9UBH6 696 aa19.28■□□□□ 0.68
COL9A3-207ENST00000467819 ADAM29Q9UKF5 820 aa19.28■□□□□ 0.68
COL9A3-207ENST00000467819 DTX4Q9Y2E6 619 aa19.28■□□□□ 0.68
COL9A3-207ENST00000467819 C15orf41Q9Y2V0 281 aa19.28■□□□□ 0.68
COL9A3-207ENST00000467819 ZNF469Q96JG9 3925 aaPredicted RBP19.28■□□□□ 0.68
COL9A3-207ENST00000467819 GNB5O14775 395 aa19.27■□□□□ 0.68
COL9A3-207ENST00000467819 SMIM24O75264 130 aa19.27■□□□□ 0.68
COL9A3-207ENST00000467819 HPNP05981 417 aa19.27■□□□□ 0.68
COL9A3-207ENST00000467819 RBP1P09455 135 aa19.27■□□□□ 0.68
COL9A3-207ENST00000467819 PORP16435 677 aaPredicted RBP19.27■□□□□ 0.68
COL9A3-207ENST00000467819 GPX3P22352 226 aa19.27■□□□□ 0.68
COL9A3-207ENST00000467819 ABCD3P28288 659 aa19.27■□□□□ 0.68
COL9A3-207ENST00000467819 CEACAM8P31997 349 aaPredicted RBP19.27■□□□□ 0.68
COL9A3-207ENST00000467819 CASP3P42574 277 aa19.27■□□□□ 0.68
COL9A3-207ENST00000467819 MAPK12P53778 367 aa19.27■□□□□ 0.68
COL9A3-207ENST00000467819 RPP38P78345 283 aaKnown RBP19.27■□□□□ 0.68
COL9A3-207ENST00000467819 RPS27LQ71UM5 84 aaKnown RBP19.27■□□□□ 0.68
COL9A3-207ENST00000467819 LACC1Q8IV20 430 aa19.27■□□□□ 0.68
COL9A3-207ENST00000467819 PM20D2Q8IYS1 436 aa19.27■□□□□ 0.68
COL9A3-207ENST00000467819 OR7G1Q8NGA0 311 aa19.27■□□□□ 0.68
COL9A3-207ENST00000467819 SECISBP2Q96T21 854 aaKnown RBP19.27■□□□□ 0.68
COL9A3-207ENST00000467819 SH3GL2Q99962 352 aa19.27■□□□□ 0.68
COL9A3-207ENST00000467819 LRRC1Q9BTT6 524 aa19.27■□□□□ 0.68
COL9A3-207ENST00000467819 BRINP2Q9C0B6 783 aa19.27■□□□□ 0.68
COL9A3-207ENST00000467819 NXF5Q9H1B4 397 aaKnown RBP19.27■□□□□ 0.68
COL9A3-207ENST00000467819 CLEC4MQ9H2X3 399 aaPredicted RBP19.27■□□□□ 0.68
COL9A3-207ENST00000467819 LIME1Q9H400 295 aa19.27■□□□□ 0.68
COL9A3-207ENST00000467819 CCM2LQ9NUG4 571 aaPredicted RBP19.27■□□□□ 0.68
COL9A3-207ENST00000467819 AHSPQ9NZD4 102 aa19.27■□□□□ 0.68
COL9A3-207ENST00000467819 SLC12A4Q9UP95 1085 aa19.27■□□□□ 0.68
COL9A3-207ENST00000467819 STX16-NPEPL1H3BU86 382 aa19.26■□□□□ 0.67
COL9A3-207ENST00000467819 SYT5O00445 386 aa19.26■□□□□ 0.67
COL9A3-207ENST00000467819 STX16O14662 325 aa19.26■□□□□ 0.67
COL9A3-207ENST00000467819 DIAPH2O60879 1101 aa19.26■□□□□ 0.67
COL9A3-207ENST00000467819 ERAL1O75616 437 aaKnown RBP19.26■□□□□ 0.67
COL9A3-207ENST00000467819 IL2RAP01589 272 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms