RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 OVCH2Q7RTZ1 564 aa17.14■□□□□ 0.33
SNAPC3-205ENST00000467062 VTCN1Q7Z7D3 282 aa17.14■□□□□ 0.33
SNAPC3-205ENST00000467062 C1orf52Q8N6N3 182 aaKnown RBP17.14■□□□□ 0.33
SNAPC3-205ENST00000467062 OR9Q1Q8NGQ5 310 aa17.14■□□□□ 0.33
SNAPC3-205ENST00000467062 AP3S1Q92572 193 aa17.14■□□□□ 0.33
SNAPC3-205ENST00000467062 FRG2BQ96QU4 278 aa17.14■□□□□ 0.33
SNAPC3-205ENST00000467062 HPF1Q9NWY4 346 aa17.14■□□□□ 0.33
SNAPC3-205ENST00000467062 LIPT1Q9Y234 373 aa17.14■□□□□ 0.33
SNAPC3-205ENST00000467062 CFAP20Q9Y6A4 193 aaKnown RBP17.14■□□□□ 0.33
SNAPC3-205ENST00000467062 SH3D21A4FU49 640 aa17.14■□□□□ 0.33
SNAPC3-205ENST00000467062 E7EQ34 232 aa17.14■□□□□ 0.33
SNAPC3-205ENST00000467062 LAG3P18627 525 aa17.14■□□□□ 0.33
SNAPC3-205ENST00000467062 HAAOP46952 286 aa17.14■□□□□ 0.33
SNAPC3-205ENST00000467062 VEGFBP49765 207 aa17.14■□□□□ 0.33
SNAPC3-205ENST00000467062 MNX1P50219 401 aaPredicted RBP17.14■□□□□ 0.33
SNAPC3-205ENST00000467062 ZNF81P51508 661 aa17.14■□□□□ 0.33
SNAPC3-205ENST00000467062 CTSCP53634 463 aa17.14■□□□□ 0.33
SNAPC3-205ENST00000467062 ERVFC1P60507 584 aa17.14■□□□□ 0.33
SNAPC3-205ENST00000467062 WDR5P61964 334 aaKnown RBP17.14■□□□□ 0.33
SNAPC3-205ENST00000467062 IRF8Q02556 426 aa17.14■□□□□ 0.33
SNAPC3-205ENST00000467062 GRM7Q14831 915 aa17.14■□□□□ 0.33
SNAPC3-205ENST00000467062 XKR6Q5GH73 641 aa17.14■□□□□ 0.33
SNAPC3-205ENST00000467062 LY6G5CQ5SRR4 150 aa17.14■□□□□ 0.33
SNAPC3-205ENST00000467062 TMEM107Q6UX40 140 aa17.14■□□□□ 0.33
SNAPC3-205ENST00000467062 GDPD4Q6W3E5 623 aa17.14■□□□□ 0.33
SNAPC3-205ENST00000467062 CEP76Q8TAP6 659 aa17.14■□□□□ 0.33
SNAPC3-205ENST00000467062 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.14■□□□□ 0.339e-6■□□□□ 8.6
SNAPC3-205ENST00000467062 RADILQ96JH8 1075 aa17.14■□□□□ 0.33
SNAPC3-205ENST00000467062 CCM2Q9BSQ5 444 aa17.14■□□□□ 0.33
SNAPC3-205ENST00000467062 SYNDIG1Q9H7V2 258 aa17.14■□□□□ 0.33
SNAPC3-205ENST00000467062 SLC28A3Q9HAS3 691 aa17.14■□□□□ 0.33
SNAPC3-205ENST00000467062 SDHAF2Q9NX18 166 aa17.14■□□□□ 0.33
SNAPC3-205ENST00000467062 SLC25A13Q9UJS0 675 aa17.14■□□□□ 0.33
SNAPC3-205ENST00000467062 TMCC3Q9ULS5 477 aa17.14■□□□□ 0.33
SNAPC3-205ENST00000467062 LOC102723532A0A0G2JNH3 316 aa17.13■□□□□ 0.33
SNAPC3-205ENST00000467062 QSOX1O00391 747 aa17.13■□□□□ 0.33
SNAPC3-205ENST00000467062 PCSK2P16519 638 aa17.13■□□□□ 0.33
SNAPC3-205ENST00000467062 AMD1P17707 334 aa17.13■□□□□ 0.33
SNAPC3-205ENST00000467062 STOMP27105 288 aa17.13■□□□□ 0.33
SNAPC3-205ENST00000467062 APEX1P27695 318 aaKnown RBP17.13■□□□□ 0.33
SNAPC3-205ENST00000467062 SDC2P34741 201 aa17.13■□□□□ 0.33
SNAPC3-205ENST00000467062 SLC6A12P48065 614 aa17.13■□□□□ 0.33
SNAPC3-205ENST00000467062 MICAQ29983 383 aa17.13■□□□□ 0.33
SNAPC3-205ENST00000467062 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.13■□□□□ 0.33
SNAPC3-205ENST00000467062 ZNF697Q5TEC3 545 aa17.13■□□□□ 0.33
SNAPC3-205ENST00000467062 ADIPOR2Q86V24 386 aa17.13■□□□□ 0.33
SNAPC3-205ENST00000467062 SLC44A2Q8IWA5 706 aaPredicted RBP17.13■□□□□ 0.33
SNAPC3-205ENST00000467062 SMG7Q92540 1137 aaKnown RBP17.13■□□□□ 0.33
SNAPC3-205ENST00000467062 PANX1Q96RD7 426 aa17.13■□□□□ 0.33
SNAPC3-205ENST00000467062 KCNH6Q9H252 994 aa17.13■□□□□ 0.33
SNAPC3-205ENST00000467062 PLEKHB1Q9UF11 243 aaPredicted RBP17.13■□□□□ 0.33
SNAPC3-205ENST00000467062 TBX21Q9UL17 535 aa17.13■□□□□ 0.33
SNAPC3-205ENST00000467062 PCDHGB3Q9Y5G1 929 aa17.13■□□□□ 0.33
SNAPC3-205ENST00000467062 WNT6Q9Y6F9 365 aa17.13■□□□□ 0.33
SNAPC3-205ENST00000467062 KIAA0100Q14667 2235 aaKnown RBP17.13■□□□□ 0.33
SNAPC3-205ENST00000467062 IGLV3-16A0A075B6K0 115 aa17.13■□□□□ 0.33
SNAPC3-205ENST00000467062 GRM6O15303 877 aa17.13■□□□□ 0.33
SNAPC3-205ENST00000467062 LZTS3O60299 673 aaPredicted RBP17.13■□□□□ 0.33
SNAPC3-205ENST00000467062 AP2A2O94973 939 aa17.13■□□□□ 0.33
SNAPC3-205ENST00000467062 ETHE1O95571 254 aa17.13■□□□□ 0.33
SNAPC3-205ENST00000467062 GBAP04062 536 aa17.13■□□□□ 0.33
SNAPC3-205ENST00000467062 CBSLP0DN79 551 aa17.13■□□□□ 0.33
SNAPC3-205ENST00000467062 PDHA2P29803 388 aa17.13■□□□□ 0.33
SNAPC3-205ENST00000467062 CBSP35520 551 aa17.13■□□□□ 0.33
SNAPC3-205ENST00000467062 METAP1P53582 386 aa17.13■□□□□ 0.33
SNAPC3-205ENST00000467062 NAE1Q13564 534 aa17.13■□□□□ 0.33
SNAPC3-205ENST00000467062 SNAPC1Q16533 368 aa17.13■□□□□ 0.33
SNAPC3-205ENST00000467062 ZNF628Q5EBL2 1059 aa17.13■□□□□ 0.33
SNAPC3-205ENST00000467062 ERICH5Q6P6B1 374 aa17.13■□□□□ 0.33
SNAPC3-205ENST00000467062 METAP1DQ6UB28 335 aaPredicted RBP17.13■□□□□ 0.33
SNAPC3-205ENST00000467062 SYT12Q8IV01 421 aa17.13■□□□□ 0.33
SNAPC3-205ENST00000467062 TMEM145Q8NBT3 493 aa17.13■□□□□ 0.33
SNAPC3-205ENST00000467062 UTP15Q8TED0 518 aaKnown RBP17.13■□□□□ 0.33
SNAPC3-205ENST00000467062 UCN3Q969E3 161 aa17.13■□□□□ 0.33
SNAPC3-205ENST00000467062 DPYSL5Q9BPU6 564 aa17.13■□□□□ 0.33
SNAPC3-205ENST00000467062 SLC29A3Q9BZD2 475 aa17.13■□□□□ 0.33
SNAPC3-205ENST00000467062 DNAJC11Q9NVH1 559 aa17.13■□□□□ 0.33
SNAPC3-205ENST00000467062 RNF215Q9Y6U7 377 aa17.13■□□□□ 0.33
SNAPC3-205ENST00000467062 PRAMEF33A0A0G2JMD5 474 aa17.12■□□□□ 0.33
SNAPC3-205ENST00000467062 NUPL2O15504 423 aaKnown RBP17.12■□□□□ 0.33
SNAPC3-205ENST00000467062 TSPAN6O43657 245 aa17.12■□□□□ 0.33
SNAPC3-205ENST00000467062 PRAMEF10O60809 474 aa17.12■□□□□ 0.33
SNAPC3-205ENST00000467062 MPC2O95563 127 aa17.12■□□□□ 0.33
SNAPC3-205ENST00000467062 GNRH1P01148 92 aa17.12■□□□□ 0.33
SNAPC3-205ENST00000467062 AQP1P29972 269 aa17.12■□□□□ 0.33
SNAPC3-205ENST00000467062 SOX3P41225 446 aa17.12■□□□□ 0.33
SNAPC3-205ENST00000467062 PPP3R1P63098 170 aa17.12■□□□□ 0.33
SNAPC3-205ENST00000467062 CAMK1Q14012 370 aa17.12■□□□□ 0.33
SNAPC3-205ENST00000467062 C6orf132Q5T0Z8 1188 aa17.12■□□□□ 0.33
SNAPC3-205ENST00000467062 ZNF655Q8N720 491 aaPredicted RBP17.12■□□□□ 0.33
SNAPC3-205ENST00000467062 GPR156Q8NFN8 814 aa17.12■□□□□ 0.33
SNAPC3-205ENST00000467062 TMEM43Q9BTV4 400 aa17.12■□□□□ 0.33
SNAPC3-205ENST00000467062 GFYI3L273 518 aa17.12■□□□□ 0.33
SNAPC3-205ENST00000467062 KPNA5O15131 536 aa17.12■□□□□ 0.33
SNAPC3-205ENST00000467062 SULT1B1O43704 296 aa17.12■□□□□ 0.33
SNAPC3-205ENST00000467062 SH3BP5O60239 455 aa17.12■□□□□ 0.33
SNAPC3-205ENST00000467062 CTSLP07711 333 aa17.12■□□□□ 0.33
SNAPC3-205ENST00000467062 NUDT7P0C024 238 aa17.12■□□□□ 0.33
SNAPC3-205ENST00000467062 ENGP17813 658 aa17.12■□□□□ 0.33
SNAPC3-205ENST00000467062 PTBP1P26599 531 aaKnown RBP eCLIP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms