RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 OR2A12Q8NGT7 310 aa12.29□□□□□ -0.44
PDZRN3-205ENST00000466780 SLC5A11Q8WWX8 675 aa12.29□□□□□ -0.44
PDZRN3-205ENST00000466780 AP3S1Q92572 193 aa12.29□□□□□ -0.44
PDZRN3-205ENST00000466780 SENP5Q96HI0 755 aaPredicted RBP12.29□□□□□ -0.44
PDZRN3-205ENST00000466780 SERHL2Q9H4I8 314 aa12.29□□□□□ -0.44
PDZRN3-205ENST00000466780 MAN2C1Q9NTJ4 1040 aa12.29□□□□□ -0.44
PDZRN3-205ENST00000466780 INSL5Q9Y5Q6 135 aa12.29□□□□□ -0.44
PDZRN3-205ENST00000466780 CKAP5Q14008 2032 aa12.29□□□□□ -0.44
PDZRN3-205ENST00000466780 TMEM129A0AVI4 362 aa12.29□□□□□ -0.44
PDZRN3-205ENST00000466780 PRAMEF27A3QJZ7 478 aa12.29□□□□□ -0.44
PDZRN3-205ENST00000466780 M0R3H8 397 aa12.29□□□□□ -0.44
PDZRN3-205ENST00000466780 PROM1O43490 865 aa12.29□□□□□ -0.44
PDZRN3-205ENST00000466780 PDE9AO76083 593 aa12.29□□□□□ -0.44
PDZRN3-205ENST00000466780 EPHX1P07099 455 aa12.29□□□□□ -0.44
PDZRN3-205ENST00000466780 NR2F6P10588 404 aa12.29□□□□□ -0.44
PDZRN3-205ENST00000466780 MYL12AP19105 171 aa12.29□□□□□ -0.44
PDZRN3-205ENST00000466780 SOX18P35713 384 aa12.29□□□□□ -0.44
PDZRN3-205ENST00000466780 CLDN20P56880 219 aa12.29□□□□□ -0.44
PDZRN3-205ENST00000466780 CDK5Q00535 292 aa12.29□□□□□ -0.44
PDZRN3-205ENST00000466780 TAP2Q03519 686 aa12.29□□□□□ -0.44
PDZRN3-205ENST00000466780 NFE2L1Q14494 772 aa12.29□□□□□ -0.44
PDZRN3-205ENST00000466780 ZNF658BQ4V348 819 aaPredicted RBP12.29□□□□□ -0.44
PDZRN3-205ENST00000466780 TRIQKQ629K1 86 aa12.29□□□□□ -0.44
PDZRN3-205ENST00000466780 HIST2H2AA3Q6FI13 130 aa12.29□□□□□ -0.44
PDZRN3-205ENST00000466780 SHFQ7M4L6 423 aa12.29□□□□□ -0.44
PDZRN3-205ENST00000466780 MEX3DQ86XN8 651 aaKnown RBP12.29□□□□□ -0.44
PDZRN3-205ENST00000466780 C19orf18Q8NEA5 215 aa12.29□□□□□ -0.44
PDZRN3-205ENST00000466780 ANGPTL6Q8NI99 470 aa12.29□□□□□ -0.44
PDZRN3-205ENST00000466780 TMEM163Q8TC26 289 aa12.29□□□□□ -0.44
PDZRN3-205ENST00000466780 GLYATL1Q969I3 302 aa12.29□□□□□ -0.44
PDZRN3-205ENST00000466780 ZSCAN5AQ9BUG6 496 aa12.29□□□□□ -0.44
PDZRN3-205ENST00000466780 PLA2G12AQ9BZM1 189 aa12.29□□□□□ -0.44
PDZRN3-205ENST00000466780 FGF20Q9NP95 211 aaPredicted RBP12.29□□□□□ -0.44
PDZRN3-205ENST00000466780 C5AR2Q9P296 337 aa12.29□□□□□ -0.44
PDZRN3-205ENST00000466780 SHISA3A0PJX4 238 aa12.28□□□□□ -0.44
PDZRN3-205ENST00000466780 QSOX1O00391 747 aa12.28□□□□□ -0.44
PDZRN3-205ENST00000466780 LYRM1O43325 122 aa12.28□□□□□ -0.44
PDZRN3-205ENST00000466780 ICMTO60725 284 aa12.28□□□□□ -0.44
PDZRN3-205ENST00000466780 TRIM3O75382 744 aaPredicted RBP12.28□□□□□ -0.44
PDZRN3-205ENST00000466780 NCR1O76036 304 aa12.28□□□□□ -0.44
PDZRN3-205ENST00000466780 LALBAP00709 142 aa12.28□□□□□ -0.44
PDZRN3-205ENST00000466780 CYP2A6P11509 494 aaPredicted RBP12.28□□□□□ -0.44
PDZRN3-205ENST00000466780 OR3A3P47888 321 aa12.28□□□□□ -0.44
PDZRN3-205ENST00000466780 EPHB3P54753 998 aa12.28□□□□□ -0.44
PDZRN3-205ENST00000466780 BRAT1Q6PJG6 821 aa12.28□□□□□ -0.44
PDZRN3-205ENST00000466780 CD200R1LQ6Q8B3 271 aa12.28□□□□□ -0.44
PDZRN3-205ENST00000466780 CD300LDQ6UXZ3 194 aa12.28□□□□□ -0.44
PDZRN3-205ENST00000466780 OLIG3Q7RTU3 272 aa12.28□□□□□ -0.44
PDZRN3-205ENST00000466780 C6orf120Q7Z4R8 191 aa12.28□□□□□ -0.44
PDZRN3-205ENST00000466780 KIF18BQ86Y91 864 aa12.28□□□□□ -0.44
PDZRN3-205ENST00000466780 OR4K5Q8NGD3 323 aa12.28□□□□□ -0.44
PDZRN3-205ENST00000466780 OR5H6Q8NGV6 325 aa12.28□□□□□ -0.44
PDZRN3-205ENST00000466780 RNFT2Q96EX2 444 aa12.28□□□□□ -0.44
PDZRN3-205ENST00000466780 SMG9Q9H0W8 520 aaKnown RBP12.28□□□□□ -0.44
PDZRN3-205ENST00000466780 SIRT3Q9NTG7 399 aaPredicted RBP12.28□□□□□ -0.44
PDZRN3-205ENST00000466780 MRPS18AQ9NVS2 196 aaKnown RBP12.28□□□□□ -0.44
PDZRN3-205ENST00000466780 MCUBQ9NWR8 336 aa12.28□□□□□ -0.44
PDZRN3-205ENST00000466780 PCDHGB7Q9Y5F8 929 aa12.28□□□□□ -0.44
PDZRN3-205ENST00000466780 PDE4DIPQ5VU43 2346 aa12.28□□□□□ -0.44
PDZRN3-205ENST00000466780 LAMA2P24043 3122 aaKnown RBP12.28□□□□□ -0.44
PDZRN3-205ENST00000466780 KIF26AQ9ULI4 1882 aaPredicted RBP12.28□□□□□ -0.44
PDZRN3-205ENST00000466780 C12orf71A8MTZ7 269 aa12.28□□□□□ -0.44
PDZRN3-205ENST00000466780 RFXAPO00287 272 aa12.28□□□□□ -0.44
PDZRN3-205ENST00000466780 RTCAO00442 366 aaKnown RBP12.28□□□□□ -0.44
PDZRN3-205ENST00000466780 TBX6O95947 436 aaPredicted RBP12.28□□□□□ -0.44
PDZRN3-205ENST00000466780 LIMS3P0CW19 117 aa12.28□□□□□ -0.44
PDZRN3-205ENST00000466780 LIMS4P0CW20 117 aa12.28□□□□□ -0.44
PDZRN3-205ENST00000466780 ACP2P11117 423 aa12.28□□□□□ -0.44
PDZRN3-205ENST00000466780 GABRR2P28476 465 aa12.28□□□□□ -0.44
PDZRN3-205ENST00000466780 FGF9P31371 208 aaPredicted RBP12.28□□□□□ -0.44
PDZRN3-205ENST00000466780 GABRA5P31644 462 aa12.28□□□□□ -0.44
PDZRN3-205ENST00000466780 EVX1P49640 407 aa12.28□□□□□ -0.44
PDZRN3-205ENST00000466780 ABATP80404 500 aa12.28□□□□□ -0.44
PDZRN3-205ENST00000466780 TLE2Q04725 743 aa12.28□□□□□ -0.44
PDZRN3-205ENST00000466780 HSPB3Q12988 150 aa12.28□□□□□ -0.44
PDZRN3-205ENST00000466780 SNAPC1Q16533 368 aa12.28□□□□□ -0.44
PDZRN3-205ENST00000466780 WSCD2Q2TBF2 565 aa12.28□□□□□ -0.44
PDZRN3-205ENST00000466780 KLHL22Q53GT1 634 aa12.28□□□□□ -0.44
PDZRN3-205ENST00000466780 SLC9B2Q86UD5 537 aa12.28□□□□□ -0.44
PDZRN3-205ENST00000466780 IQCHQ86VS3 1027 aa12.28□□□□□ -0.44
PDZRN3-205ENST00000466780 ZNF485Q8NCK3 441 aa12.28□□□□□ -0.44
PDZRN3-205ENST00000466780 AUTS2Q8WXX7 1259 aa12.28□□□□□ -0.44
PDZRN3-205ENST00000466780 OR5P2Q8WZ92 322 aa12.28□□□□□ -0.44
PDZRN3-205ENST00000466780 UFD1Q92890 307 aa12.28□□□□□ -0.44
PDZRN3-205ENST00000466780 ATF6BQ99941 703 aa12.28□□□□□ -0.44
PDZRN3-205ENST00000466780 MARVELD1Q9BSK0 173 aa12.28□□□□□ -0.44
PDZRN3-205ENST00000466780 TMEM43Q9BTV4 400 aa12.28□□□□□ -0.44
PDZRN3-205ENST00000466780 ZNF717Q9BY31 904 aaPredicted RBP12.28□□□□□ -0.44
PDZRN3-205ENST00000466780 LINC00597Q9H2U6 94 aa12.28□□□□□ -0.44
PDZRN3-205ENST00000466780 MRPL17Q9NRX2 175 aaKnown RBP12.28□□□□□ -0.44
PDZRN3-205ENST00000466780 SEC14L3Q9UDX4 400 aa12.28□□□□□ -0.44
PDZRN3-205ENST00000466780 SLC25A13Q9UJS0 675 aa12.28□□□□□ -0.44
PDZRN3-205ENST00000466780 LOC102723532A0A0G2JNH3 316 aa12.27□□□□□ -0.44
PDZRN3-205ENST00000466780 FAM240BA0A1B0GVZ2 78 aa12.27□□□□□ -0.44
PDZRN3-205ENST00000466780 A0A1W2PRQ8 180 aa12.27□□□□□ -0.44
PDZRN3-205ENST00000466780 CASKO14936 926 aa12.27□□□□□ -0.44
PDZRN3-205ENST00000466780 ARHGEF9O43307 516 aa12.27□□□□□ -0.44
PDZRN3-205ENST00000466780 OR2B3O76000 313 aa12.27□□□□□ -0.44
PDZRN3-205ENST00000466780 PRKAR1AP10644 381 aa12.27□□□□□ -0.44
PDZRN3-205ENST00000466780 TIMP2P16035 220 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms