RNA–Protein interactions for RNA: ENST00000466763.5

UBA3-209, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-209ENST00000466763 SUN3Q8TAQ9 357 aa12.9□□□□□ -0.34
UBA3-209ENST00000466763 NUDT8Q8WV74 236 aa12.9□□□□□ -0.34
UBA3-209ENST00000466763 CIDECQ96AQ7 238 aaPredicted RBP12.9□□□□□ -0.34
UBA3-209ENST00000466763 MTERF3Q96E29 417 aa12.9□□□□□ -0.34
UBA3-209ENST00000466763 MAGED4Q96JG8 741 aa12.9□□□□□ -0.34
UBA3-209ENST00000466763 PRPF18Q99633 342 aaKnown RBP12.9□□□□□ -0.34
UBA3-209ENST00000466763 DPY30Q9C005 99 aa12.9□□□□□ -0.34
UBA3-209ENST00000466763 OR10A5Q9H207 317 aa12.9□□□□□ -0.34
UBA3-209ENST00000466763 SLAMF7Q9NQ25 335 aa12.9□□□□□ -0.34
UBA3-209ENST00000466763 MAT2BQ9NZL9 334 aa12.9□□□□□ -0.34
UBA3-209ENST00000466763 CSAG2Q9Y5P2 127 aa12.9□□□□□ -0.34
UBA3-209ENST00000466763 COL6A6A6NMZ7 2263 aa12.89□□□□□ -0.35
UBA3-209ENST00000466763 OR5H15A6NDH6 313 aa12.89□□□□□ -0.35
UBA3-209ENST00000466763 SCAMP2O15127 329 aaKnown RBP12.89□□□□□ -0.35
UBA3-209ENST00000466763 IGKV3-11P04433 115 aa12.89□□□□□ -0.35
UBA3-209ENST00000466763 PRPS1L1P21108 318 aa12.89□□□□□ -0.35
UBA3-209ENST00000466763 SSR4P51571 173 aa12.89□□□□□ -0.35
UBA3-209ENST00000466763 AQP5P55064 265 aa12.89□□□□□ -0.35
UBA3-209ENST00000466763 MANFP55145 182 aaKnown RBP12.89□□□□□ -0.35
UBA3-209ENST00000466763 CLDN8P56748 225 aa12.89□□□□□ -0.35
UBA3-209ENST00000466763 SLC37A1P57057 533 aa12.89□□□□□ -0.35
UBA3-209ENST00000466763 GUCY1A3Q02108 690 aa12.89□□□□□ -0.35
UBA3-209ENST00000466763 FUT7Q11130 342 aa12.89□□□□□ -0.35
UBA3-209ENST00000466763 HSPB3Q12988 150 aa12.89□□□□□ -0.35
UBA3-209ENST00000466763 SLC6A19Q695T7 634 aa12.89□□□□□ -0.35
UBA3-209ENST00000466763 IGFL2Q6UWQ7 119 aa12.89□□□□□ -0.35
UBA3-209ENST00000466763 IGFL3Q6UXB1 125 aa12.89□□□□□ -0.35
UBA3-209ENST00000466763 ZNF551Q7Z340 670 aaPredicted RBP12.89□□□□□ -0.35
UBA3-209ENST00000466763 MAVSQ7Z434 540 aa12.89□□□□□ -0.35
UBA3-209ENST00000466763 C9orf40Q8IXQ3 194 aa12.89□□□□□ -0.35
UBA3-209ENST00000466763 OR52R1Q8NGF1 315 aa12.89□□□□□ -0.35
UBA3-209ENST00000466763 CEP70Q8NHQ1 597 aa12.89□□□□□ -0.35
UBA3-209ENST00000466763 ZFP28Q8NHY6 868 aa12.89□□□□□ -0.35
UBA3-209ENST00000466763 HAS2Q92819 552 aa12.89□□□□□ -0.35
UBA3-209ENST00000466763 MARK4Q96L34 752 aa12.89□□□□□ -0.35
UBA3-209ENST00000466763 AMDHD1Q96NU7 426 aa12.89□□□□□ -0.35
UBA3-209ENST00000466763 OR52B2Q96RD2 323 aa12.89□□□□□ -0.35
UBA3-209ENST00000466763 GLIPR2Q9H4G4 154 aa12.89□□□□□ -0.35
UBA3-209ENST00000466763 ANKRA2Q9H9E1 313 aa12.89□□□□□ -0.35
UBA3-209ENST00000466763 ATAD3AQ9NVI7 634 aa12.89□□□□□ -0.35
UBA3-209ENST00000466763 ASIC5Q9NY37 505 aa12.89□□□□□ -0.35
UBA3-209ENST00000466763 TAS2R7Q9NYW3 318 aa12.89□□□□□ -0.35
UBA3-209ENST00000466763 MAP10Q9P2G4 905 aa12.89□□□□□ -0.35
UBA3-209ENST00000466763 MYOTQ9UBF9 498 aa12.89□□□□□ -0.35
UBA3-209ENST00000466763 ATP6V1HQ9UI12 483 aa12.89□□□□□ -0.35
UBA3-209ENST00000466763 YARS2Q9Y2Z4 477 aaKnown RBP12.89□□□□□ -0.35
UBA3-209ENST00000466763 TLN1Q9Y490 2541 aaKnown RBP12.89□□□□□ -0.35
UBA3-209ENST00000466763 CPAMD8Q8IZJ3 1885 aa12.89□□□□□ -0.35
UBA3-209ENST00000466763 NBEAQ8NFP9 2946 aa12.89□□□□□ -0.35
UBA3-209ENST00000466763 CHD6Q8TD26 2715 aa12.88□□□□□ -0.35
UBA3-209ENST00000466763 C2orf92A0A1B0GVN3 265 aa12.88□□□□□ -0.35
UBA3-209ENST00000466763 OR6C76A6NM76 312 aa12.88□□□□□ -0.35
UBA3-209ENST00000466763 POLR3GO15318 223 aaPredicted RBP12.88□□□□□ -0.35
UBA3-209ENST00000466763 OR2J2O76002 312 aa12.88□□□□□ -0.35
UBA3-209ENST00000466763 VIMP08670 466 aaKnown RBP12.88□□□□□ -0.35
UBA3-209ENST00000466763 LAMP1P11279 417 aa12.88□□□□□ -0.35
UBA3-209ENST00000466763 CD96P40200 585 aa12.88□□□□□ -0.35
UBA3-209ENST00000466763 MGAT2Q10469 447 aa12.88□□□□□ -0.35
UBA3-209ENST00000466763 TUBA3CQ13748 450 aa12.88□□□□□ -0.35
UBA3-209ENST00000466763 PDE7AQ13946 482 aa12.88□□□□□ -0.35
UBA3-209ENST00000466763 TLR1Q15399 786 aa12.88□□□□□ -0.35
UBA3-209ENST00000466763 PLEKHN1Q494U1 663 aaPredicted RBP12.88□□□□□ -0.35
UBA3-209ENST00000466763 ZNF628Q5EBL2 1059 aa12.88□□□□□ -0.35
UBA3-209ENST00000466763 TMEM198Q66K66 360 aa12.88□□□□□ -0.35
UBA3-209ENST00000466763 TUBA3EQ6PEY2 450 aa12.88□□□□□ -0.35
UBA3-209ENST00000466763 EPGNQ6UW88 154 aa12.88□□□□□ -0.35
UBA3-209ENST00000466763 TMEM107Q6UX40 140 aa12.88□□□□□ -0.35
UBA3-209ENST00000466763 RGS9BPQ6ZS82 235 aa12.88□□□□□ -0.35
UBA3-209ENST00000466763 PRICKLE2Q7Z3G6 844 aa12.88□□□□□ -0.35
UBA3-209ENST00000466763 SZRD1Q7Z422 152 aa12.88□□□□□ -0.35
UBA3-209ENST00000466763 LRRC34Q8IZ02 419 aa12.88□□□□□ -0.35
UBA3-209ENST00000466763 LGI4Q8N135 537 aa12.88□□□□□ -0.35
UBA3-209ENST00000466763 ZNF843Q8N446 348 aa12.88□□□□□ -0.35
UBA3-209ENST00000466763 SIMC1Q8NDZ2 872 aa12.88□□□□□ -0.35
UBA3-209ENST00000466763 OR7G1Q8NGA0 311 aa12.88□□□□□ -0.35
UBA3-209ENST00000466763 OR8K3Q8NH51 312 aa12.88□□□□□ -0.35
UBA3-209ENST00000466763 ZNF675Q8TD23 568 aa12.88□□□□□ -0.35
UBA3-209ENST00000466763 ACTRT2Q8TDY3 377 aa12.88□□□□□ -0.35
UBA3-209ENST00000466763 ASB15Q8WXK1 588 aa12.88□□□□□ -0.35
UBA3-209ENST00000466763 ZBED6CLQ96FA7 236 aaPredicted RBP12.88□□□□□ -0.35
UBA3-209ENST00000466763 WWTR1Q9GZV5 400 aa12.88□□□□□ -0.35
UBA3-209ENST00000466763 NPHS2Q9NP85 383 aa12.88□□□□□ -0.35
UBA3-209ENST00000466763 LRFN1Q9P244 771 aa12.88□□□□□ -0.35
UBA3-209ENST00000466763 ANAPC2Q9UJX6 822 aa12.88□□□□□ -0.35
UBA3-209ENST00000466763 ERVK-11Q9UQG0 969 aa12.88□□□□□ -0.35
UBA3-209ENST00000466763 B3GNT3Q9Y2A9 372 aa12.88□□□□□ -0.35
UBA3-209ENST00000466763 NUP214P35658 2090 aaPredicted RBP12.88□□□□□ -0.35
UBA3-209ENST00000466763 A0A1W2PRB8 838 aa12.87□□□□□ -0.35
UBA3-209ENST00000466763 TMEM200CA6NKL6 621 aa12.87□□□□□ -0.35
UBA3-209ENST00000466763 TTLL8A6PVC2 850 aa12.87□□□□□ -0.35
UBA3-209ENST00000466763 A8MVJ9 347 aa12.87□□□□□ -0.35
UBA3-209ENST00000466763 ZNF195O14628 629 aa12.87□□□□□ -0.35
UBA3-209ENST00000466763 UBDO15205 165 aa12.87□□□□□ -0.35
UBA3-209ENST00000466763 CFLARO15519 480 aa12.87□□□□□ -0.35
UBA3-209ENST00000466763 TBX19O60806 448 aa12.87□□□□□ -0.35
UBA3-209ENST00000466763 PRAMEF2O60811 474 aa12.87□□□□□ -0.35
UBA3-209ENST00000466763 EDF1O60869 148 aaKnown RBP12.87□□□□□ -0.35
UBA3-209ENST00000466763 BCAS2O75934 225 aaPredicted RBP12.87□□□□□ -0.35
UBA3-209ENST00000466763 TGDSO95455 350 aa12.87□□□□□ -0.35
UBA3-209ENST00000466763 CBX7O95931 251 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms