RNA–Protein interactions for RNA: ENST00000466342.1

SQSTM1-206, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 808 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-206ENST00000466342 FBN1P35555 2871 aaKnown RBP11.07□□□□□ -0.64
SQSTM1-206ENST00000466342 A0A1W2PR48 441 aa11.07□□□□□ -0.64
SQSTM1-206ENST00000466342 SYNDIG1LA6NDD5 238 aa11.07□□□□□ -0.64
SQSTM1-206ENST00000466342 OR5H15A6NDH6 313 aa11.07□□□□□ -0.64
SQSTM1-206ENST00000466342 A8MUI8 341 aa11.07□□□□□ -0.64
SQSTM1-206ENST00000466342 CDK2AP1O14519 115 aa11.07□□□□□ -0.64
SQSTM1-206ENST00000466342 KLF11O14901 512 aa11.07□□□□□ -0.64
SQSTM1-206ENST00000466342 PIP5K1BO14986 540 aa11.07□□□□□ -0.64
SQSTM1-206ENST00000466342 PCDH7O60245 1069 aa11.07□□□□□ -0.64
SQSTM1-206ENST00000466342 CTNSO60931 367 aa11.07□□□□□ -0.64
SQSTM1-206ENST00000466342 GUCY1B2O75343 617 aa11.07□□□□□ -0.64
SQSTM1-206ENST00000466342 PRKRAO75569 313 aaKnown RBP11.07□□□□□ -0.64
SQSTM1-206ENST00000466342 AIFM1O95831 613 aa11.07□□□□□ -0.64
SQSTM1-206ENST00000466342 WDPCPO95876 746 aa11.07□□□□□ -0.64
SQSTM1-206ENST00000466342 LINC00032P0C843 101 aa11.07□□□□□ -0.64
SQSTM1-206ENST00000466342 TIA1P31483 386 aaKnown RBP eCLIP11.07□□□□□ -0.64
SQSTM1-206ENST00000466342 RPL14P50914 215 aaKnown RBP11.07□□□□□ -0.64
SQSTM1-206ENST00000466342 TRA2BP62995 288 aaKnown RBP11.07□□□□□ -0.64
SQSTM1-206ENST00000466342 ADAM8P78325 824 aa11.07□□□□□ -0.64
SQSTM1-206ENST00000466342 BTKQ06187 659 aa11.07□□□□□ -0.64
SQSTM1-206ENST00000466342 CEBPEQ15744 281 aa11.07□□□□□ -0.64
SQSTM1-206ENST00000466342 KRTCAP3Q53RY4 240 aa11.07□□□□□ -0.64
SQSTM1-206ENST00000466342 SFT2D3Q587I9 215 aa11.07□□□□□ -0.64
SQSTM1-206ENST00000466342 XKR7Q5GH72 579 aa11.07□□□□□ -0.64
SQSTM1-206ENST00000466342 C18orf63Q68DL7 685 aa11.07□□□□□ -0.64
SQSTM1-206ENST00000466342 GALNT18Q6P9A2 607 aa11.07□□□□□ -0.64
SQSTM1-206ENST00000466342 PAPD4Q6PIY7 484 aaKnown RBP11.07□□□□□ -0.64
SQSTM1-206ENST00000466342 Q6ZSR9 355 aa11.07□□□□□ -0.64
SQSTM1-206ENST00000466342 CLNKQ7Z7G1 428 aa11.07□□□□□ -0.64
SQSTM1-206ENST00000466342 CCT7Q99832 543 aa11.07□□□□□ -0.64
SQSTM1-206ENST00000466342 SMR3AQ99954 134 aa11.07□□□□□ -0.64
SQSTM1-206ENST00000466342 RPF2Q9H7B2 306 aaKnown RBP11.07□□□□□ -0.64
SQSTM1-206ENST00000466342 WDR41Q9HAD4 459 aa11.07□□□□□ -0.64
SQSTM1-206ENST00000466342 KCNK13Q9HB14 408 aa11.07□□□□□ -0.64
SQSTM1-206ENST00000466342 MMP25Q9NPA2 562 aa11.07□□□□□ -0.64
SQSTM1-206ENST00000466342 MED4Q9NPJ6 270 aa11.07□□□□□ -0.64
SQSTM1-206ENST00000466342 PFDN4Q9NQP4 134 aa11.07□□□□□ -0.64
SQSTM1-206ENST00000466342 INTS9Q9NV88 658 aaKnown RBP11.07□□□□□ -0.64
SQSTM1-206ENST00000466342 COQ3Q9NZJ6 369 aa11.07□□□□□ -0.64
SQSTM1-206ENST00000466342 CLDN16Q9Y5I7 305 aa11.07□□□□□ -0.64
SQSTM1-206ENST00000466342 COL6A5A8TX70 2615 aa11.06□□□□□ -0.64
SQSTM1-206ENST00000466342 GNG14A0A1W2PPG7 69 aa11.06□□□□□ -0.64
SQSTM1-206ENST00000466342 E9PLN8 166 aa11.06□□□□□ -0.64
SQSTM1-206ENST00000466342 TGFBR3LH3BV60 316 aa11.06□□□□□ -0.64
SQSTM1-206ENST00000466342 LSM1O15116 133 aaKnown RBP11.06□□□□□ -0.64
SQSTM1-206ENST00000466342 LDB3O75112 727 aa11.06□□□□□ -0.64
SQSTM1-206ENST00000466342 SKAP2O75563 359 aaPredicted RBP11.06□□□□□ -0.64
SQSTM1-206ENST00000466342 F10P00742 488 aa11.06□□□□□ -0.64
SQSTM1-206ENST00000466342 PPP2R1BP30154 601 aa11.06□□□□□ -0.64
SQSTM1-206ENST00000466342 GSTM5P46439 218 aa11.06□□□□□ -0.64
SQSTM1-206ENST00000466342 OR4D2P58180 307 aa11.06□□□□□ -0.64
SQSTM1-206ENST00000466342 OCRLQ01968 901 aa11.06□□□□□ -0.64
SQSTM1-206ENST00000466342 SERTAD2Q14140 314 aa11.06□□□□□ -0.64
SQSTM1-206ENST00000466342 KIAA0040Q15053 153 aa11.06□□□□□ -0.64
SQSTM1-206ENST00000466342 HSP90B2PQ58FF3 399 aa11.06□□□□□ -0.64
SQSTM1-206ENST00000466342 ACER2Q5QJU3 275 aa11.06□□□□□ -0.64
SQSTM1-206ENST00000466342 NDUFAF5Q5TEU4 345 aa11.06□□□□□ -0.64
SQSTM1-206ENST00000466342 TMEM198Q66K66 360 aa11.06□□□□□ -0.64
SQSTM1-206ENST00000466342 OR52E8Q6IFG1 317 aa11.06□□□□□ -0.64
SQSTM1-206ENST00000466342 DMRTC2Q8IXT2 367 aaPredicted RBP11.06□□□□□ -0.64
SQSTM1-206ENST00000466342 FAM76AQ8TAV0 307 aa11.06□□□□□ -0.64
SQSTM1-206ENST00000466342 DYDC1Q8WWB3 177 aa11.06□□□□□ -0.64
SQSTM1-206ENST00000466342 ZNF75CPQ92670 426 aaPredicted RBP11.06□□□□□ -0.64
SQSTM1-206ENST00000466342 TANKQ92844 425 aa11.06□□□□□ -0.64
SQSTM1-206ENST00000466342 ANKRD9Q96BM1 317 aaPredicted RBP11.06□□□□□ -0.64
SQSTM1-206ENST00000466342 TM4SF18Q96CE8 201 aa11.06□□□□□ -0.64
SQSTM1-206ENST00000466342 ARSGQ96EG1 525 aa11.06□□□□□ -0.64
SQSTM1-206ENST00000466342 VKORC1Q9BQB6 163 aa11.06□□□□□ -0.64
SQSTM1-206ENST00000466342 EBPLQ9BY08 206 aa11.06□□□□□ -0.64
SQSTM1-206ENST00000466342 LRTM1Q9HBL6 345 aa11.06□□□□□ -0.64
SQSTM1-206ENST00000466342 C1orf109Q9NX04 203 aa11.06□□□□□ -0.64
SQSTM1-206ENST00000466342 KCNN3Q9UGI6 736 aa11.06□□□□□ -0.64
SQSTM1-206ENST00000466342 ST6GALNAC2Q9UJ37 374 aa11.06□□□□□ -0.64
SQSTM1-206ENST00000466342 C1orf226A1L170 272 aa11.05□□□□□ -0.64
SQSTM1-206ENST00000466342 DYNC1I1O14576 645 aa11.05□□□□□ -0.64
SQSTM1-206ENST00000466342 FGF17O60258 216 aa11.05□□□□□ -0.64
SQSTM1-206ENST00000466342 SEC22BO75396 215 aa11.05□□□□□ -0.64
SQSTM1-206ENST00000466342 MYO1DO94832 1006 aa11.05□□□□□ -0.64
SQSTM1-206ENST00000466342 JUNP05412 331 aaKnown RBP11.05□□□□□ -0.64
SQSTM1-206ENST00000466342 ANXA4P09525 319 aaPredicted RBP11.05□□□□□ -0.64
SQSTM1-206ENST00000466342 MEOX1P50221 254 aa11.05□□□□□ -0.64
SQSTM1-206ENST00000466342 SLC26A5P58743 744 aa11.05□□□□□ -0.64
SQSTM1-206ENST00000466342 TAS2R50P59544 299 aa11.05□□□□□ -0.64
SQSTM1-206ENST00000466342 IGLV3-21P80748 117 aaPredicted RBP11.05□□□□□ -0.64
SQSTM1-206ENST00000466342 PMP22Q01453 160 aa11.05□□□□□ -0.64
SQSTM1-206ENST00000466342 ZNF763Q0D2J5 394 aa11.05□□□□□ -0.64
SQSTM1-206ENST00000466342 STX4Q12846 297 aa11.05□□□□□ -0.64
SQSTM1-206ENST00000466342 PDCD2Q16342 344 aaPredicted RBP11.05□□□□□ -0.64
SQSTM1-206ENST00000466342 MEP1AQ16819 746 aa11.05□□□□□ -0.64
SQSTM1-206ENST00000466342 NOXRED1Q6NXP6 359 aa11.05□□□□□ -0.64
SQSTM1-206ENST00000466342 LGI4Q8N135 537 aa11.05□□□□□ -0.64
SQSTM1-206ENST00000466342 SLC5A8Q8N695 610 aa11.05□□□□□ -0.64
SQSTM1-206ENST00000466342 AMER2Q8N7J2 671 aa11.05□□□□□ -0.64
SQSTM1-206ENST00000466342 C7orf57Q8NEG2 295 aa11.05□□□□□ -0.64
SQSTM1-206ENST00000466342 LRRC8CQ8TDW0 803 aa11.05□□□□□ -0.64
SQSTM1-206ENST00000466342 FCRL1Q96LA6 429 aa11.05□□□□□ -0.64
SQSTM1-206ENST00000466342 PPP3R2Q96LZ3 170 aa11.05□□□□□ -0.64
SQSTM1-206ENST00000466342 C3orf30Q96M34 536 aa11.05□□□□□ -0.64
SQSTM1-206ENST00000466342 GPR137Q96N19 417 aa11.05□□□□□ -0.64
SQSTM1-206ENST00000466342 ALPK1Q96QP1 1244 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms