RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 EXOC3L2Q2M3D2 409 aa17.19■□□□□ 0.34
COL9A3-205ENST00000466192 ARMC6Q6NXE6 501 aa17.19■□□□□ 0.34
COL9A3-205ENST00000466192 GKN2Q86XP6 184 aa17.19■□□□□ 0.34
COL9A3-205ENST00000466192 XAGE5Q8WWM1 108 aa17.19■□□□□ 0.34
COL9A3-205ENST00000466192 ISOC1Q96CN7 298 aa17.19■□□□□ 0.34
COL9A3-205ENST00000466192 SEMA6CQ9H3T2 930 aa17.19■□□□□ 0.34
COL9A3-205ENST00000466192 FANCEQ9HB96 536 aa17.19■□□□□ 0.34
COL9A3-205ENST00000466192 RLIMQ9NVW2 624 aa17.19■□□□□ 0.34
COL9A3-205ENST00000466192 TRPC4Q9UBN4 977 aa17.19■□□□□ 0.34
COL9A3-205ENST00000466192 PHF11Q9UIL8 331 aa17.19■□□□□ 0.34
COL9A3-205ENST00000466192 PSME2Q9UL46 239 aa17.19■□□□□ 0.34
COL9A3-205ENST00000466192 NDRG4Q9ULP0 352 aaKnown RBP17.19■□□□□ 0.34
COL9A3-205ENST00000466192 FAM32AQ9Y421 112 aaKnown RBP17.19■□□□□ 0.34
COL9A3-205ENST00000466192 MYO15AQ9UKN7 3530 aa17.19■□□□□ 0.34
COL9A3-205ENST00000466192 CACNA1IQ9P0X4 2223 aa17.18■□□□□ 0.34
COL9A3-205ENST00000466192 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.18■□□□□ 0.34
COL9A3-205ENST00000466192 ZSCAN9O15535 394 aaPredicted RBP17.18■□□□□ 0.34
COL9A3-205ENST00000466192 XPNPEP2O43895 674 aa17.18■□□□□ 0.34
COL9A3-205ENST00000466192 HMGN2P05204 90 aaKnown RBP17.18■□□□□ 0.34
COL9A3-205ENST00000466192 DCNP07585 359 aaKnown RBP17.18■□□□□ 0.34
COL9A3-205ENST00000466192 HTR1AP08908 422 aa17.18■□□□□ 0.34
COL9A3-205ENST00000466192 XCR1P46094 333 aa17.18■□□□□ 0.34
COL9A3-205ENST00000466192 FASLGP48023 281 aa17.18■□□□□ 0.34
COL9A3-205ENST00000466192 PUM1Q14671 1186 aaKnown RBP eCLIP17.18■□□□□ 0.34
COL9A3-205ENST00000466192 SLC5A8Q8N695 610 aa17.18■□□□□ 0.34
COL9A3-205ENST00000466192 OR10G2Q8NGC3 310 aa17.18■□□□□ 0.34
COL9A3-205ENST00000466192 OR4C15Q8NGM1 316 aa17.18■□□□□ 0.34
COL9A3-205ENST00000466192 FBLIM1Q8WUP2 373 aa17.18■□□□□ 0.34
COL9A3-205ENST00000466192 YIPF4Q9BSR8 244 aa17.18■□□□□ 0.34
COL9A3-205ENST00000466192 ANKRA2Q9H9E1 313 aa17.18■□□□□ 0.34
COL9A3-205ENST00000466192 STARD5Q9NSY2 213 aa17.18■□□□□ 0.34
COL9A3-205ENST00000466192 CHCHD3Q9NX63 227 aaKnown RBP17.18■□□□□ 0.34
COL9A3-205ENST00000466192 RHCGQ9UBD6 479 aa17.18■□□□□ 0.34
COL9A3-205ENST00000466192 DOLKQ9UPQ8 538 aa17.18■□□□□ 0.34
COL9A3-205ENST00000466192 SLC28A2O43868 658 aa17.18■□□□□ 0.34
COL9A3-205ENST00000466192 TRMUO75648 421 aaKnown RBP17.18■□□□□ 0.34
COL9A3-205ENST00000466192 DNAJB5O75953 348 aa17.18■□□□□ 0.34
COL9A3-205ENST00000466192 UBXN7O94888 489 aa17.18■□□□□ 0.34
COL9A3-205ENST00000466192 MFN2O95140 757 aa17.18■□□□□ 0.34
COL9A3-205ENST00000466192 CPNE6O95741 557 aa17.18■□□□□ 0.34
COL9A3-205ENST00000466192 ANGPTL1O95841 491 aa17.18■□□□□ 0.34
COL9A3-205ENST00000466192 IFNW1P05000 195 aa17.18■□□□□ 0.34
COL9A3-205ENST00000466192 FHP07954 510 aa17.18■□□□□ 0.34
COL9A3-205ENST00000466192 CD247P20963 164 aa17.18■□□□□ 0.34
COL9A3-205ENST00000466192 FMO3P31513 532 aa17.18■□□□□ 0.34
COL9A3-205ENST00000466192 MC3RP41968 323 aa17.18■□□□□ 0.34
COL9A3-205ENST00000466192 VSX2P58304 361 aaPredicted RBP17.18■□□□□ 0.34
COL9A3-205ENST00000466192 RPP38P78345 283 aaKnown RBP17.18■□□□□ 0.34
COL9A3-205ENST00000466192 LASP1Q14847 261 aaKnown RBP17.18■□□□□ 0.34
COL9A3-205ENST00000466192 LTB4RQ15722 352 aa17.18■□□□□ 0.34
COL9A3-205ENST00000466192 GPR107Q5VW38 600 aa17.18■□□□□ 0.34
COL9A3-205ENST00000466192 SPARTQ8N0X7 666 aa17.18■□□□□ 0.34
COL9A3-205ENST00000466192 LGI4Q8N135 537 aa17.18■□□□□ 0.34
COL9A3-205ENST00000466192 CSNK1A1LQ8N752 337 aa17.18■□□□□ 0.34
COL9A3-205ENST00000466192 ELP4Q96EB1 424 aa17.18■□□□□ 0.34
COL9A3-205ENST00000466192 PIP5K1AQ99755 562 aa17.18■□□□□ 0.34
COL9A3-205ENST00000466192 APOL4Q9BPW4 351 aa17.18■□□□□ 0.34
COL9A3-205ENST00000466192 TREX2Q9BQ50 279 aaPredicted RBP17.18■□□□□ 0.34
COL9A3-205ENST00000466192 OCEL1Q9H607 264 aa17.18■□□□□ 0.34
COL9A3-205ENST00000466192 PAK1IP1Q9NWT1 392 aaPredicted RBP17.18■□□□□ 0.34
COL9A3-205ENST00000466192 P2RX2Q9UBL9 471 aa17.18■□□□□ 0.34
COL9A3-205ENST00000466192 SLC22A7Q9Y694 548 aa17.18■□□□□ 0.34
COL9A3-205ENST00000466192 K7ESF4 209 aa17.17■□□□□ 0.34
COL9A3-205ENST00000466192 CTSBP07858 339 aa17.17■□□□□ 0.34
COL9A3-205ENST00000466192 NXPH1P58417 271 aa17.17■□□□□ 0.34
COL9A3-205ENST00000466192 GABARAPL2P60520 117 aa17.17■□□□□ 0.34
COL9A3-205ENST00000466192 SIM1P81133 766 aaPredicted RBP17.17■□□□□ 0.34
COL9A3-205ENST00000466192 TOP3AQ13472 1001 aaPredicted RBP17.17■□□□□ 0.34
COL9A3-205ENST00000466192 MICAQ29983 383 aa17.17■□□□□ 0.34
COL9A3-205ENST00000466192 DEFB110Q30KQ9 67 aa17.17■□□□□ 0.34
COL9A3-205ENST00000466192 XAF1Q6GPH4 301 aa17.17■□□□□ 0.34
COL9A3-205ENST00000466192 GPR32P1Q8NGA4 272 aa17.17■□□□□ 0.34
COL9A3-205ENST00000466192 APOBEC4Q8WW27 367 aaKnown RBP17.17■□□□□ 0.34
COL9A3-205ENST00000466192 UBE2FQ969M7 185 aa17.17■□□□□ 0.34
COL9A3-205ENST00000466192 C16orf58Q96GQ5 468 aa17.17■□□□□ 0.34
COL9A3-205ENST00000466192 IL21RQ9HBE5 538 aa17.17■□□□□ 0.34
COL9A3-205ENST00000466192 ACER3Q9NUN7 267 aa17.17■□□□□ 0.34
COL9A3-205ENST00000466192 ENPP4Q9Y6X5 453 aa17.17■□□□□ 0.34
COL9A3-205ENST00000466192 TMEM247A6NEH6 219 aa17.16■□□□□ 0.34
COL9A3-205ENST00000466192 EMC8O43402 210 aa17.16■□□□□ 0.34
COL9A3-205ENST00000466192 ZNF10P21506 573 aaPredicted RBP17.16■□□□□ 0.34
COL9A3-205ENST00000466192 CDH3P22223 829 aa17.16■□□□□ 0.34
COL9A3-205ENST00000466192 GSSP48637 474 aa17.16■□□□□ 0.34
COL9A3-205ENST00000466192 CSNK1EP49674 416 aaKnown RBP17.16■□□□□ 0.34
COL9A3-205ENST00000466192 KHKP50053 298 aa17.16■□□□□ 0.34
COL9A3-205ENST00000466192 MANEAQ5SRI9 462 aa17.16■□□□□ 0.34
COL9A3-205ENST00000466192 BHLHB9Q6PI77 547 aa17.16■□□□□ 0.34
COL9A3-205ENST00000466192 OLIG3Q7RTU3 272 aa17.16■□□□□ 0.34
COL9A3-205ENST00000466192 B3GNT8Q7Z7M8 397 aa17.16■□□□□ 0.34
COL9A3-205ENST00000466192 TSPYL5Q86VY4 417 aaPredicted RBP17.16■□□□□ 0.34
COL9A3-205ENST00000466192 CCDC71Q8IV32 467 aaPredicted RBP17.16■□□□□ 0.34
COL9A3-205ENST00000466192 OR4N5Q8IXE1 308 aa17.16■□□□□ 0.34
COL9A3-205ENST00000466192 ZNF655Q8N720 491 aaPredicted RBP17.16■□□□□ 0.34
COL9A3-205ENST00000466192 OR9Q2Q8NGE9 314 aa17.16■□□□□ 0.34
COL9A3-205ENST00000466192 OR56A1Q8NGH5 318 aa17.16■□□□□ 0.34
COL9A3-205ENST00000466192 KAT2AQ92830 837 aa17.16■□□□□ 0.34
COL9A3-205ENST00000466192 MOAP1Q96BY2 351 aa17.16■□□□□ 0.34
COL9A3-205ENST00000466192 SPACA7Q96KW9 195 aa17.16■□□□□ 0.34
COL9A3-205ENST00000466192 COL21A1Q96P44 957 aa17.16■□□□□ 0.34
COL9A3-205ENST00000466192 PCDH17O14917 1159 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms