RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 SERPINB1P30740 379 aa13.17□□□□□ -0.3
SMC1A-204ENST00000463684 GALNSP34059 522 aa13.17□□□□□ -0.3
SMC1A-204ENST00000463684 SLC12A2P55011 1212 aa13.17□□□□□ -0.3
SMC1A-204ENST00000463684 FAM27E3Q08E93 113 aa13.17□□□□□ -0.3
SMC1A-204ENST00000463684 KBTBD12Q3ZCT8 623 aa13.17□□□□□ -0.3
SMC1A-204ENST00000463684 HP1BP3Q5SSJ5 553 aaPredicted RBP13.17□□□□□ -0.3
SMC1A-204ENST00000463684 DEPDC1Q5TB30 811 aa13.17□□□□□ -0.3
SMC1A-204ENST00000463684 ANGPTL8Q6UXH0 198 aa13.17□□□□□ -0.3
SMC1A-204ENST00000463684 ZC3HC1Q86WB0 502 aaKnown RBP13.17□□□□□ -0.3
SMC1A-204ENST00000463684 PDIK1LQ8N165 341 aa13.17□□□□□ -0.3
SMC1A-204ENST00000463684 OR14L1PQ8NHC6 308 aa13.17□□□□□ -0.3
SMC1A-204ENST00000463684 MS4A14Q96JA4 679 aa13.17□□□□□ -0.3
SMC1A-204ENST00000463684 FAM111AQ96PZ2 611 aa13.17□□□□□ -0.3
SMC1A-204ENST00000463684 UCN2Q96RP3 112 aa13.17□□□□□ -0.3
SMC1A-204ENST00000463684 SORBS1Q9BX66 1292 aaKnown RBP13.17□□□□□ -0.3
SMC1A-204ENST00000463684 GSX2Q9BZM3 304 aa13.17□□□□□ -0.3
SMC1A-204ENST00000463684 DERL2Q9GZP9 239 aa13.17□□□□□ -0.3
SMC1A-204ENST00000463684 RBSNQ9H1K0 784 aa13.17□□□□□ -0.3
SMC1A-204ENST00000463684 OR51B5Q9H339 312 aa13.17□□□□□ -0.3
SMC1A-204ENST00000463684 POPDC3Q9HBV1 291 aa13.17□□□□□ -0.3
SMC1A-204ENST00000463684 KLHL28Q9NXS3 571 aa13.17□□□□□ -0.3
SMC1A-204ENST00000463684 CD274Q9NZQ7 290 aa13.17□□□□□ -0.3
SMC1A-204ENST00000463684 DNALI1O14645 258 aaPredicted RBP13.16□□□□□ -0.3
SMC1A-204ENST00000463684 MSTNO14793 375 aa13.16□□□□□ -0.3
SMC1A-204ENST00000463684 SIAH2O43255 324 aa13.16□□□□□ -0.3
SMC1A-204ENST00000463684 PRKRAO75569 313 aaKnown RBP13.16□□□□□ -0.3
SMC1A-204ENST00000463684 SMNDC1O75940 238 aaKnown RBP eCLIP13.16□□□□□ -0.3
SMC1A-204ENST00000463684 CLPSP04118 112 aa13.16□□□□□ -0.3
SMC1A-204ENST00000463684 S100BP04271 92 aaPredicted RBP13.16□□□□□ -0.3
SMC1A-204ENST00000463684 SLC35E2BP0CK96 405 aa13.16□□□□□ -0.3
SMC1A-204ENST00000463684 SLC35E2P0CK97 266 aa13.16□□□□□ -0.3
SMC1A-204ENST00000463684 CRYGSP22914 178 aa13.16□□□□□ -0.3
SMC1A-204ENST00000463684 SSTR4P31391 388 aa13.16□□□□□ -0.3
SMC1A-204ENST00000463684 ELK3P41970 407 aa13.16□□□□□ -0.3
SMC1A-204ENST00000463684 PTH2RP49190 550 aa13.16□□□□□ -0.3
SMC1A-204ENST00000463684 RPS13P62277 151 aaKnown RBP13.16□□□□□ -0.3
SMC1A-204ENST00000463684 PLEKHM3Q6ZWE6 761 aa13.16□□□□□ -0.3
SMC1A-204ENST00000463684 ADGRE4PQ86SQ3 457 aa13.16□□□□□ -0.3
SMC1A-204ENST00000463684 TRIM42Q8IWZ5 723 aa13.16□□□□□ -0.3
SMC1A-204ENST00000463684 LAS2Q8IYD9 372 aa13.16□□□□□ -0.3
SMC1A-204ENST00000463684 ZCCHC7Q8N3Z6 543 aaKnown RBP13.16□□□□□ -0.3
SMC1A-204ENST00000463684 SPATA6LQ8N4H0 392 aa13.16□□□□□ -0.3
SMC1A-204ENST00000463684 PPP1R14CQ8TAE6 165 aa13.16□□□□□ -0.3
SMC1A-204ENST00000463684 PBKQ96KB5 322 aa13.16□□□□□ -0.3
SMC1A-204ENST00000463684 WDR41Q9HAD4 459 aa13.16□□□□□ -0.3
SMC1A-204ENST00000463684 PLAC1Q9HBJ0 212 aa13.16□□□□□ -0.3
SMC1A-204ENST00000463684 ASIC3Q9UHC3 531 aa13.16□□□□□ -0.3
SMC1A-204ENST00000463684 ADGRE2Q9UHX3 823 aa13.16□□□□□ -0.3
SMC1A-204ENST00000463684 CHMP2BQ9UQN3 213 aa13.16□□□□□ -0.3
SMC1A-204ENST00000463684 PSAT1Q9Y617 370 aa13.16□□□□□ -0.3
SMC1A-204ENST00000463684 KIAA1549Q9HCM3 1950 aa13.16□□□□□ -0.3
SMC1A-204ENST00000463684 GLOD5A6NK44 160 aa13.15□□□□□ -0.3
SMC1A-204ENST00000463684 WASHC1A8K0Z3 465 aa13.15□□□□□ -0.3
SMC1A-204ENST00000463684 GOLGA6L6A8MZA4 724 aa13.15□□□□□ -0.3
SMC1A-204ENST00000463684 CBR3O75828 277 aa13.15□□□□□ -0.3
SMC1A-204ENST00000463684 IFNA2P01563 188 aa13.15□□□□□ -0.3
SMC1A-204ENST00000463684 CD79BP40259 229 aa13.15□□□□□ -0.3
SMC1A-204ENST00000463684 FNTAP49354 379 aa13.15□□□□□ -0.3
SMC1A-204ENST00000463684 PCYT1AP49585 367 aa13.15□□□□□ -0.3
SMC1A-204ENST00000463684 HNRNPH2P55795 449 aaKnown RBP13.15□□□□□ -0.3
SMC1A-204ENST00000463684 MGAT5Q09328 741 aa13.15□□□□□ -0.3
SMC1A-204ENST00000463684 C6orf163Q5TEZ5 329 aa13.15□□□□□ -0.3
SMC1A-204ENST00000463684 HMBOX1Q6NT76 420 aa13.15□□□□□ -0.3
SMC1A-204ENST00000463684 SLC30A6Q6NXT4 461 aa13.15□□□□□ -0.3
SMC1A-204ENST00000463684 PLXDC2Q6UX71 529 aa13.15□□□□□ -0.3
SMC1A-204ENST00000463684 ZNF662Q6ZS27 426 aa13.15□□□□□ -0.3
SMC1A-204ENST00000463684 P4HA3Q7Z4N8 544 aa13.15□□□□□ -0.3
SMC1A-204ENST00000463684 GRAMD2AQ8IUY3 354 aa13.15□□□□□ -0.3
SMC1A-204ENST00000463684 PRR22Q8IZ63 422 aa13.15□□□□□ -0.3
SMC1A-204ENST00000463684 OR7G3Q8NG95 312 aa13.15□□□□□ -0.3
SMC1A-204ENST00000463684 SLC39A3Q9BRY0 314 aa13.15□□□□□ -0.3
SMC1A-204ENST00000463684 CD244Q9BZW8 370 aa13.15□□□□□ -0.3
SMC1A-204ENST00000463684 OR10A5Q9H207 317 aa13.15□□□□□ -0.3
SMC1A-204ENST00000463684 ACTR8Q9H981 624 aa13.15□□□□□ -0.3
SMC1A-204ENST00000463684 LYARQ9NX58 379 aaKnown RBP13.15□□□□□ -0.3
SMC1A-204ENST00000463684 CLCF1Q9UBD9 225 aa13.15□□□□□ -0.3
SMC1A-204ENST00000463684 PTBP2Q9UKA9 531 aaKnown RBP13.15□□□□□ -0.3
SMC1A-204ENST00000463684 RTTNQ86VV8 2226 aa13.15□□□□□ -0.31
SMC1A-204ENST00000463684 NINQ8N4C6 2090 aa13.14□□□□□ -0.31
SMC1A-204ENST00000463684 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.14□□□□□ -0.31
SMC1A-204ENST00000463684 A0A1W2PNV4 684 aa13.14□□□□□ -0.31
SMC1A-204ENST00000463684 ICOSLGO75144 302 aa13.14□□□□□ -0.31
SMC1A-204ENST00000463684 TNFSF13O75888 250 aa13.14□□□□□ -0.31
SMC1A-204ENST00000463684 CRHP06850 196 aa13.14□□□□□ -0.31
SMC1A-204ENST00000463684 ABCB1P08183 1280 aaPredicted RBP13.14□□□□□ -0.31
SMC1A-204ENST00000463684 CCDC166P0CW27 439 aa13.14□□□□□ -0.31
SMC1A-204ENST00000463684 NR2F6P10588 404 aa13.14□□□□□ -0.31
SMC1A-204ENST00000463684 EPORP19235 508 aa13.14□□□□□ -0.31
SMC1A-204ENST00000463684 ABCD3P28288 659 aa13.14□□□□□ -0.31
SMC1A-204ENST00000463684 ILF2Q12905 390 aaKnown RBP13.14□□□□□ -0.31
SMC1A-204ENST00000463684 DDX39BQ13838 428 aaKnown RBP13.14□□□□□ -0.31
SMC1A-204ENST00000463684 FRG1Q14331 258 aaKnown RBP13.14□□□□□ -0.31
SMC1A-204ENST00000463684 STEAP4Q687X5 459 aa13.14□□□□□ -0.31
SMC1A-204ENST00000463684 AAGABQ6PD74 315 aa13.14□□□□□ -0.31
SMC1A-204ENST00000463684 PODNL1Q6PEZ8 512 aa13.14□□□□□ -0.31
SMC1A-204ENST00000463684 CYP20A1Q6UW02 462 aa13.14□□□□□ -0.31
SMC1A-204ENST00000463684 CHMP1BQ7LBR1 199 aa13.14□□□□□ -0.31
SMC1A-204ENST00000463684 LRRC70Q7Z2Q7 622 aa13.14□□□□□ -0.31
SMC1A-204ENST00000463684 NUP54Q7Z3B4 507 aa13.14□□□□□ -0.31
SMC1A-204ENST00000463684 IFNEQ86WN2 208 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms