RNA–Protein interactions for RNA: ENST00000463503.5

SSR3-202, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 596 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-202ENST00000463503 SONP18583 2426 aaKnown RBP10.36□□□□□ -0.75
SSR3-202ENST00000463503 A0A088AWK7 358 aa10.35□□□□□ -0.75
SSR3-202ENST00000463503 GABRR3A8MPY1 467 aa10.35□□□□□ -0.75
SSR3-202ENST00000463503 TMEM233B4DJY2 109 aa10.35□□□□□ -0.75
SSR3-202ENST00000463503 RGS14O43566 566 aa10.35□□□□□ -0.75
SSR3-202ENST00000463503 SLC25A12O75746 678 aa10.35□□□□□ -0.75
SSR3-202ENST00000463503 ETHE1O95571 254 aa10.35□□□□□ -0.75
SSR3-202ENST00000463503 TGFB1P01137 390 aa10.35□□□□□ -0.75
SSR3-202ENST00000463503 INHBBP09529 407 aa10.35□□□□□ -0.75
SSR3-202ENST00000463503 ALOX12P18054 663 aa10.35□□□□□ -0.75
SSR3-202ENST00000463503 ZNF10P21506 573 aaPredicted RBP10.35□□□□□ -0.75
SSR3-202ENST00000463503 DNASE1P24855 282 aa10.35□□□□□ -0.75
SSR3-202ENST00000463503 SERPINB3P29508 390 aa10.35□□□□□ -0.75
SSR3-202ENST00000463503 HOXC12P31275 282 aa10.35□□□□□ -0.75
SSR3-202ENST00000463503 GSTM5P46439 218 aa10.35□□□□□ -0.75
SSR3-202ENST00000463503 NR0B1P51843 470 aaKnown RBP10.35□□□□□ -0.75
SSR3-202ENST00000463503 NUP107P57740 925 aa10.35□□□□□ -0.75
SSR3-202ENST00000463503 MAT1AQ00266 395 aaKnown RBP10.35□□□□□ -0.75
SSR3-202ENST00000463503 BTKQ06187 659 aa10.35□□□□□ -0.75
SSR3-202ENST00000463503 TBL3Q12788 808 aaKnown RBP10.35□□□□□ -0.75
SSR3-202ENST00000463503 KIAA0040Q15053 153 aa10.35□□□□□ -0.75
SSR3-202ENST00000463503 SPIN4Q56A73 249 aa10.35□□□□□ -0.75
SSR3-202ENST00000463503 CMPK2Q5EBM0 449 aa10.35□□□□□ -0.75
SSR3-202ENST00000463503 TOR1AIP1Q5JTV8 583 aa10.35□□□□□ -0.75
SSR3-202ENST00000463503 TCHHL1Q5QJ38 904 aaPredicted RBP10.35□□□□□ -0.75
SSR3-202ENST00000463503 SLC25A25Q6KCM7 469 aa10.35□□□□□ -0.75
SSR3-202ENST00000463503 TRIM40Q6P9F5 258 aa10.35□□□□□ -0.75
SSR3-202ENST00000463503 CLEC9AQ6UXN8 241 aa10.35□□□□□ -0.75
SSR3-202ENST00000463503 CPEB2Q7Z5Q1 589 aaKnown RBP10.35□□□□□ -0.75
SSR3-202ENST00000463503 UBE3DQ7Z6J8 389 aa10.35□□□□□ -0.75
SSR3-202ENST00000463503 ZZZ3Q8IYH5 903 aa10.35□□□□□ -0.75
SSR3-202ENST00000463503 ZCCHC7Q8N3Z6 543 aaKnown RBP10.35□□□□□ -0.75
SSR3-202ENST00000463503 KCT2Q8NC54 265 aa10.35□□□□□ -0.75
SSR3-202ENST00000463503 FAM98AQ8NCA5 519 aaKnown RBP10.35□□□□□ -0.75
SSR3-202ENST00000463503 RND1Q92730 232 aa10.35□□□□□ -0.75
SSR3-202ENST00000463503 RGMAQ96B86 450 aa10.35□□□□□ -0.75
SSR3-202ENST00000463503 MMABQ96EY8 250 aaPredicted RBP10.35□□□□□ -0.75
SSR3-202ENST00000463503 KCNC2Q96PR1 638 aa10.35□□□□□ -0.75
SSR3-202ENST00000463503 YIPF2Q9BWQ6 316 aa10.35□□□□□ -0.75
SSR3-202ENST00000463503 ZNF717Q9BY31 904 aaPredicted RBP10.35□□□□□ -0.75
SSR3-202ENST00000463503 TP63Q9H3D4 680 aaPredicted RBP10.35□□□□□ -0.75
SSR3-202ENST00000463503 DDX31Q9H8H2 851 aaKnown RBP10.35□□□□□ -0.75
SSR3-202ENST00000463503 KCNK13Q9HB14 408 aa10.35□□□□□ -0.75
SSR3-202ENST00000463503 PRDM7Q9NQW5 492 aa10.35□□□□□ -0.75
SSR3-202ENST00000463503 PLSCR2Q9NRY7 297 aa10.35□□□□□ -0.75
SSR3-202ENST00000463503 TMED5Q9Y3A6 229 aa10.35□□□□□ -0.75
SSR3-202ENST00000463503 A0A0A6YYC8 382 aaPredicted RBP10.34□□□□□ -0.75
SSR3-202ENST00000463503 I3L1I5 382 aaPredicted RBP10.34□□□□□ -0.75
SSR3-202ENST00000463503 PLPP1O14494 284 aa10.34□□□□□ -0.75
SSR3-202ENST00000463503 PIP5K1BO14986 540 aa10.34□□□□□ -0.75
SSR3-202ENST00000463503 LSM1O15116 133 aaKnown RBP10.34□□□□□ -0.75
SSR3-202ENST00000463503 GALR3O60755 368 aaPredicted RBP10.34□□□□□ -0.75
SSR3-202ENST00000463503 SHOX2O60902 331 aaPredicted RBP10.34□□□□□ -0.75
SSR3-202ENST00000463503 ATE1O95260 518 aa10.34□□□□□ -0.75
SSR3-202ENST00000463503 CYC1P08574 325 aa10.34□□□□□ -0.75
SSR3-202ENST00000463503 IL10P22301 178 aa10.34□□□□□ -0.75
SSR3-202ENST00000463503 ADSLP30566 484 aaPredicted RBP10.34□□□□□ -0.75
SSR3-202ENST00000463503 LSP1P33241 339 aa10.34□□□□□ -0.75
SSR3-202ENST00000463503 BSGP35613 385 aa10.34□□□□□ -0.75
SSR3-202ENST00000463503 TRA2BP62995 288 aaKnown RBP10.34□□□□□ -0.75
SSR3-202ENST00000463503 IRX1P78414 480 aaPredicted RBP10.34□□□□□ -0.75
SSR3-202ENST00000463503 DDX39BQ13838 428 aaKnown RBP10.34□□□□□ -0.75
SSR3-202ENST00000463503 TMEM211Q6ICI0 200 aa10.34□□□□□ -0.75
SSR3-202ENST00000463503 OR4C11Q6IEV9 310 aa10.34□□□□□ -0.75
SSR3-202ENST00000463503 MRM1Q6IN84 353 aaKnown RBP10.34□□□□□ -0.75
SSR3-202ENST00000463503 OGFOD2Q6N063 350 aa10.34□□□□□ -0.75
SSR3-202ENST00000463503 LARP4Q71RC2 724 aaKnown RBP eCLIP10.34□□□□□ -0.753e-7■□□□□ 8.4
SSR3-202ENST00000463503 PAGE2Q7Z2X7 111 aa10.34□□□□□ -0.75
SSR3-202ENST00000463503 CAMKMTQ7Z624 323 aa10.34□□□□□ -0.75
SSR3-202ENST00000463503 CDC20BQ86Y33 519 aa10.34□□□□□ -0.75
SSR3-202ENST00000463503 RNF175Q8N4F7 328 aa10.34□□□□□ -0.75
SSR3-202ENST00000463503 NUDT8Q8WV74 236 aa10.34□□□□□ -0.75
SSR3-202ENST00000463503 CCT6BQ92526 530 aa10.34□□□□□ -0.75
SSR3-202ENST00000463503 CHMP6Q96FZ7 201 aa10.34□□□□□ -0.75
SSR3-202ENST00000463503 PPP3R2Q96LZ3 170 aa10.34□□□□□ -0.75
SSR3-202ENST00000463503 F2RL3Q96RI0 385 aa10.34□□□□□ -0.75
SSR3-202ENST00000463503 SERINC2Q96SA4 455 aa10.34□□□□□ -0.75
SSR3-202ENST00000463503 OR51B5Q9H339 312 aa10.34□□□□□ -0.75
SSR3-202ENST00000463503 KLHL31Q9H511 634 aa10.34□□□□□ -0.75
SSR3-202ENST00000463503 ANKHQ9HCJ1 492 aa10.34□□□□□ -0.75
SSR3-202ENST00000463503 MMP25Q9NPA2 562 aa10.34□□□□□ -0.75
SSR3-202ENST00000463503 PRDM9Q9NQV7 894 aa10.34□□□□□ -0.75
SSR3-202ENST00000463503 C1orf109Q9NX04 203 aa10.34□□□□□ -0.75
SSR3-202ENST00000463503 ASIC5Q9NY37 505 aa10.34□□□□□ -0.75
SSR3-202ENST00000463503 SLC12A4Q9UP95 1085 aa10.34□□□□□ -0.75
SSR3-202ENST00000463503 WBP11Q9Y2W2 641 aaKnown RBP10.34□□□□□ -0.75
SSR3-202ENST00000463503 USH1CQ9Y6N9 552 aa10.34□□□□□ -0.75
SSR3-202ENST00000463503 FREM3P0C091 2139 aa10.34□□□□□ -0.75
SSR3-202ENST00000463503 A0A0A6YYD5 115 aa10.33□□□□□ -0.76
SSR3-202ENST00000463503 OR2W5A6NFC9 320 aa10.33□□□□□ -0.76
SSR3-202ENST00000463503 C4orf51C9J302 202 aa10.33□□□□□ -0.76
SSR3-202ENST00000463503 SDHDO14521 159 aa10.33□□□□□ -0.76
SSR3-202ENST00000463503 TFECO14948 347 aaPredicted RBP10.33□□□□□ -0.76
SSR3-202ENST00000463503 ERI3O43414 337 aaKnown RBP10.33□□□□□ -0.76
SSR3-202ENST00000463503 JUNP05412 331 aaKnown RBP10.33□□□□□ -0.76
SSR3-202ENST00000463503 SERPIND1P05546 499 aa10.33□□□□□ -0.76
SSR3-202ENST00000463503 ZNF888P0CJ79 500 aaPredicted RBP10.33□□□□□ -0.76
SSR3-202ENST00000463503 HIST1H1TP22492 207 aaPredicted RBP10.33□□□□□ -0.76
SSR3-202ENST00000463503 ATP5A1P25705 553 aaKnown RBP10.33□□□□□ -0.76
SSR3-202ENST00000463503 RFC3P40938 356 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms