RNA–Protein interactions for RNA: ENST00000463407.5

NUP58-206, Transcript of nucleoporin 58, humanhuman

TSL 1 (best) BASIC

Gene NUP58, Length 6,360 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-206ENST00000463407 OR2L8Q8NGY9 312 aa12.2□□□□□ -0.46
NUP58-206ENST00000463407 CD200R1Q8TD46 325 aa12.2□□□□□ -0.46
NUP58-206ENST00000463407 NXPE3Q969Y0 559 aa12.2□□□□□ -0.46
NUP58-206ENST00000463407 BMFQ96LC9 184 aa12.2□□□□□ -0.46
NUP58-206ENST00000463407 ULBP3Q9BZM4 244 aa12.2□□□□□ -0.46
NUP58-206ENST00000463407 TRNAU1APQ9NX07 287 aaKnown RBP12.2□□□□□ -0.46
NUP58-206ENST00000463407 SLC7A11Q9UPY5 501 aa12.2□□□□□ -0.46
NUP58-206ENST00000463407 MT-ND5P03915 603 aa12.19□□□□□ -0.46
NUP58-206ENST00000463407 CD63P08962 238 aa12.19□□□□□ -0.46
NUP58-206ENST00000463407 PRKCAP17252 672 aa12.19□□□□□ -0.46
NUP58-206ENST00000463407 APIPQ96GX9 242 aa12.19□□□□□ -0.46
NUP58-206ENST00000463407 RTP3Q9BQQ7 232 aa12.19□□□□□ -0.46
NUP58-206ENST00000463407 NRAPQ86VF7 1730 aa12.19□□□□□ -0.46
NUP58-206ENST00000463407 TEX13CA0A0J9YWL9 993 aa12.19□□□□□ -0.46
NUP58-206ENST00000463407 GJB3O75712 270 aa12.19□□□□□ -0.46
NUP58-206ENST00000463407 SCGNO76038 276 aa12.19□□□□□ -0.46
NUP58-206ENST00000463407 S1PR1P21453 382 aa12.19□□□□□ -0.46
NUP58-206ENST00000463407 MAPK3P27361 379 aaPredicted RBP12.19□□□□□ -0.46
NUP58-206ENST00000463407 ERVPABLB-1P60509 514 aa12.19□□□□□ -0.46
NUP58-206ENST00000463407 MPP2Q14168 576 aa12.19□□□□□ -0.46
NUP58-206ENST00000463407 SCGB2B2Q4G0G5 96 aa12.19□□□□□ -0.46
NUP58-206ENST00000463407 UNQ6126/PRO20091Q6UXV3 157 aa12.19□□□□□ -0.46
NUP58-206ENST00000463407 GID4Q8IVV7 300 aa12.19□□□□□ -0.46
NUP58-206ENST00000463407 NAALAD2Q9Y3Q0 740 aa12.19□□□□□ -0.46
NUP58-206ENST00000463407 PCDHGA6Q9Y5G7 932 aa12.19□□□□□ -0.46
NUP58-206ENST00000463407 ANKRD36CQ5JPF3 1778 aa12.19□□□□□ -0.46
NUP58-206ENST00000463407 A6NLC8 198 aa12.19□□□□□ -0.46
NUP58-206ENST00000463407 F11P03951 625 aa12.19□□□□□ -0.46
NUP58-206ENST00000463407 PSKH1P11801 424 aa12.19□□□□□ -0.46
NUP58-206ENST00000463407 SF3B4Q15427 424 aaKnown RBP eCLIP12.19□□□□□ -0.462e-9■□□□□ 10.9
NUP58-206ENST00000463407 CTC1Q2NKJ3 1217 aa12.19□□□□□ -0.46
NUP58-206ENST00000463407 DCAF12Q5T6F0 453 aa12.19□□□□□ -0.46
NUP58-206ENST00000463407 PARM1Q6UWI2 310 aa12.19□□□□□ -0.46
NUP58-206ENST00000463407 CHCHD4Q8N4Q1 142 aa12.19□□□□□ -0.46
NUP58-206ENST00000463407 OR2T33Q8NG76 320 aa12.19□□□□□ -0.46
NUP58-206ENST00000463407 PGAM5Q96HS1 289 aa12.19□□□□□ -0.46
NUP58-206ENST00000463407 MACROD1Q9BQ69 325 aa12.19□□□□□ -0.46
NUP58-206ENST00000463407 TIMM29Q9BSF4 260 aa12.19□□□□□ -0.46
NUP58-206ENST00000463407 MYH4Q9Y623 1939 aa12.19□□□□□ -0.46
NUP58-206ENST00000463407 PROM1O43490 865 aa12.19□□□□□ -0.46
NUP58-206ENST00000463407 ARL6IP5O75915 188 aa12.19□□□□□ -0.46
NUP58-206ENST00000463407 C1SP09871 688 aa12.19□□□□□ -0.46
NUP58-206ENST00000463407 HTR1EP28566 365 aa12.19□□□□□ -0.46
NUP58-206ENST00000463407 CTSCP53634 463 aa12.19□□□□□ -0.46
NUP58-206ENST00000463407 MVKQ03426 396 aa12.19□□□□□ -0.46
NUP58-206ENST00000463407 SLC36A3Q495N2 470 aa12.19□□□□□ -0.46
NUP58-206ENST00000463407 GTF2IRD2BQ6EKJ0 949 aa12.19□□□□□ -0.46
NUP58-206ENST00000463407 THOC7Q6I9Y2 204 aaKnown RBP12.19□□□□□ -0.46
NUP58-206ENST00000463407 GAREM2Q75VX8 874 aa12.19□□□□□ -0.46
NUP58-206ENST00000463407 GTF2IRD2Q86UP8 949 aa12.19□□□□□ -0.46
NUP58-206ENST00000463407 TREML1Q86YW5 311 aa12.19□□□□□ -0.46
NUP58-206ENST00000463407 OR51G2Q8NGK0 314 aa12.19□□□□□ -0.46
NUP58-206ENST00000463407 RHBDF1Q96CC6 855 aa12.19□□□□□ -0.46
NUP58-206ENST00000463407 GAREM1Q9H706 876 aa12.19□□□□□ -0.46
NUP58-206ENST00000463407 UBE2ZQ9H832 354 aaPredicted RBP12.19□□□□□ -0.46
NUP58-206ENST00000463407 MGAT4AQ9UM21 535 aa12.19□□□□□ -0.46
NUP58-206ENST00000463407 EXOSC1Q9Y3B2 195 aaKnown RBP12.19□□□□□ -0.46
NUP58-206ENST00000463407 PRSS21Q9Y6M0 314 aa12.19□□□□□ -0.46
NUP58-206ENST00000463407 GGT2P36268 569 aa12.19□□□□□ -0.46
NUP58-206ENST00000463407 AFF3P51826 1226 aaKnown RBP12.19□□□□□ -0.46
NUP58-206ENST00000463407 CLDN8P56748 225 aa12.19□□□□□ -0.46
NUP58-206ENST00000463407 ZNF789Q5FWF6 425 aa12.19□□□□□ -0.46
NUP58-206ENST00000463407 CLECL1Q8IZS7 167 aa12.19□□□□□ -0.46
NUP58-206ENST00000463407 ARFGAP1Q8N6T3 406 aa12.19□□□□□ -0.46
NUP58-206ENST00000463407 OR8K3Q8NH51 312 aa12.19□□□□□ -0.46
NUP58-206ENST00000463407 ECHDC3Q96DC8 303 aa12.19□□□□□ -0.46
NUP58-206ENST00000463407 C5orf51A6NDU8 294 aa12.18□□□□□ -0.46
NUP58-206ENST00000463407 PVRP15151 417 aa12.18□□□□□ -0.46
NUP58-206ENST00000463407 XCR1P46094 333 aa12.18□□□□□ -0.46
NUP58-206ENST00000463407 EPHA4P54764 986 aa12.18□□□□□ -0.46
NUP58-206ENST00000463407 TAS2R43P59537 309 aa12.18□□□□□ -0.46
NUP58-206ENST00000463407 CNPY1Q3B7I2 92 aa12.18□□□□□ -0.46
NUP58-206ENST00000463407 TRIM61Q5EBN2 209 aa12.18□□□□□ -0.46
NUP58-206ENST00000463407 MANEAQ5SRI9 462 aa12.18□□□□□ -0.46
NUP58-206ENST00000463407 EEF1A1P5Q5VTE0 462 aa12.18□□□□□ -0.46
NUP58-206ENST00000463407 RPL13AP3Q6NVV1 102 aa12.18□□□□□ -0.46
NUP58-206ENST00000463407 ARL14Q8N4G2 192 aa12.18□□□□□ -0.46
NUP58-206ENST00000463407 OR9A2Q8NGT5 310 aa12.18□□□□□ -0.46
NUP58-206ENST00000463407 TMEM41AQ96HV5 264 aa12.18□□□□□ -0.46
NUP58-206ENST00000463407 BARD1Q99728 777 aaKnown RBP12.18□□□□□ -0.46
NUP58-206ENST00000463407 MEMO1Q9Y316 297 aa12.18□□□□□ -0.46
NUP58-206ENST00000463407 ORC5O43913 435 aa12.18□□□□□ -0.46
NUP58-206ENST00000463407 ERCC1P07992 297 aaPredicted RBP12.18□□□□□ -0.46
NUP58-206ENST00000463407 SLC2A2P11168 524 aaPredicted RBP12.18□□□□□ -0.46
NUP58-206ENST00000463407 PRKCDQ05655 676 aa12.18□□□□□ -0.46
NUP58-206ENST00000463407 BLOC1S3Q6QNY0 202 aa12.18□□□□□ -0.46
NUP58-206ENST00000463407 ZNF551Q7Z340 670 aaPredicted RBP12.18□□□□□ -0.46
NUP58-206ENST00000463407 ZNF554Q86TJ5 538 aa12.18□□□□□ -0.46
NUP58-206ENST00000463407 SFXN2Q96NB2 322 aa12.18□□□□□ -0.46
NUP58-206ENST00000463407 CWH43Q9H720 699 aa12.18□□□□□ -0.46
NUP58-206ENST00000463407 PEPDP12955 493 aa12.18□□□□□ -0.46
NUP58-206ENST00000463407 SFTPDP35247 375 aa12.18□□□□□ -0.46
NUP58-206ENST00000463407 ULK3Q6PHR2 472 aa12.18□□□□□ -0.46
NUP58-206ENST00000463407 KCTD18Q6PI47 426 aaPredicted RBP12.18□□□□□ -0.46
NUP58-206ENST00000463407 ARHGAP12Q8IWW6 846 aa12.18□□□□□ -0.46
NUP58-206ENST00000463407 PNPLA1Q8N8W4 532 aa12.18□□□□□ -0.46
NUP58-206ENST00000463407 NANSQ9NR45 359 aa12.18□□□□□ -0.46
NUP58-206ENST00000463407 LHX3Q9UBR4 397 aa12.18□□□□□ -0.46
NUP58-206ENST00000463407 DNAJC15Q9Y5T4 150 aa12.18□□□□□ -0.46
NUP58-206ENST00000463407 DCNP07585 359 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms