RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 SRSF11Q05519 484 aaKnown RBP10.96□□□□□ -0.65
CPNE1-221ENST00000462352 HSPB3Q12988 150 aa10.96□□□□□ -0.65
CPNE1-221ENST00000462352 EXOSC7Q15024 291 aaKnown RBP10.96□□□□□ -0.65
CPNE1-221ENST00000462352 DPY19L1Q2PZI1 675 aa10.96□□□□□ -0.65
CPNE1-221ENST00000462352 FAM174BQ3ZCQ3 159 aa10.96□□□□□ -0.65
CPNE1-221ENST00000462352 CRB2Q5IJ48 1285 aa10.96□□□□□ -0.65
CPNE1-221ENST00000462352 SPANXN4Q5MJ08 99 aa10.96□□□□□ -0.65
CPNE1-221ENST00000462352 B3GNTL1Q67FW5 361 aaPredicted RBP10.96□□□□□ -0.65
CPNE1-221ENST00000462352 FCRLBQ6BAA4 426 aa10.96□□□□□ -0.65
CPNE1-221ENST00000462352 PAOXQ6QHF9 649 aa10.96□□□□□ -0.65
CPNE1-221ENST00000462352 PCSK4Q6UW60 755 aa10.96□□□□□ -0.65
CPNE1-221ENST00000462352 TMEM107Q6UX40 140 aa10.96□□□□□ -0.65
CPNE1-221ENST00000462352 HSDL2Q6YN16 418 aa10.96□□□□□ -0.65
CPNE1-221ENST00000462352 RNF111Q6ZNA4 994 aa10.96□□□□□ -0.65
CPNE1-221ENST00000462352 C9orf40Q8IXQ3 194 aa10.96□□□□□ -0.65
CPNE1-221ENST00000462352 SLC5A8Q8N695 610 aa10.96□□□□□ -0.65
CPNE1-221ENST00000462352 ZNF615Q8N8J6 731 aa10.96□□□□□ -0.65
CPNE1-221ENST00000462352 EXD3Q8N9H8 876 aa10.96□□□□□ -0.65
CPNE1-221ENST00000462352 GLB1L3Q8NCI6 653 aaPredicted RBP10.96□□□□□ -0.65
CPNE1-221ENST00000462352 SIMC1Q8NDZ2 872 aa10.96□□□□□ -0.65
CPNE1-221ENST00000462352 OR7G2Q8NG99 324 aa10.96□□□□□ -0.65
CPNE1-221ENST00000462352 OR7G1Q8NGA0 311 aa10.96□□□□□ -0.65
CPNE1-221ENST00000462352 OR8J2Q8NGG1 315 aa10.96□□□□□ -0.65
CPNE1-221ENST00000462352 OR9I1Q8NGQ6 314 aa10.96□□□□□ -0.65
CPNE1-221ENST00000462352 OR8K3Q8NH51 312 aa10.96□□□□□ -0.65
CPNE1-221ENST00000462352 ZFP28Q8NHY6 868 aa10.96□□□□□ -0.65
CPNE1-221ENST00000462352 ZBTB18Q99592 522 aa10.96□□□□□ -0.65
CPNE1-221ENST00000462352 NPAS2Q99743 824 aa10.96□□□□□ -0.65
CPNE1-221ENST00000462352 OR10A5Q9H207 317 aa10.96□□□□□ -0.65
CPNE1-221ENST00000462352 ADNPQ9H2P0 1102 aa10.96□□□□□ -0.65
CPNE1-221ENST00000462352 ANKRA2Q9H9E1 313 aa10.96□□□□□ -0.65
CPNE1-221ENST00000462352 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.96□□□□□ -0.65
CPNE1-221ENST00000462352 TUBD1Q9UJT1 453 aa10.96□□□□□ -0.65
CPNE1-221ENST00000462352 TRIM33Q9UPN9 1127 aa10.96□□□□□ -0.65
CPNE1-221ENST00000462352 COPG1Q9Y678 874 aaKnown RBP10.96□□□□□ -0.65
CPNE1-221ENST00000462352 DOCK10Q96BY6 2186 aa10.95□□□□□ -0.66
CPNE1-221ENST00000462352 TMEM200CA6NKL6 621 aa10.95□□□□□ -0.66
CPNE1-221ENST00000462352 OR6C76A6NM76 312 aa10.95□□□□□ -0.66
CPNE1-221ENST00000462352 K7EM74 188 aa10.95□□□□□ -0.66
CPNE1-221ENST00000462352 PLOD2O00469 737 aa10.95□□□□□ -0.66
CPNE1-221ENST00000462352 MAN1A2O60476 641 aa10.95□□□□□ -0.66
CPNE1-221ENST00000462352 PLOD3O60568 738 aa10.95□□□□□ -0.66
CPNE1-221ENST00000462352 SCN2BO60939 215 aa10.95□□□□□ -0.66
CPNE1-221ENST00000462352 PDGFAP04085 211 aa10.95□□□□□ -0.66
CPNE1-221ENST00000462352 ALPPP05187 535 aa10.95□□□□□ -0.66
CPNE1-221ENST00000462352 DRD4P21917 467 aa10.95□□□□□ -0.66
CPNE1-221ENST00000462352 GPC1P35052 558 aa10.95□□□□□ -0.66
CPNE1-221ENST00000462352 MC3RP41968 323 aa10.95□□□□□ -0.66
CPNE1-221ENST00000462352 KIR3DL1P43629 444 aa10.95□□□□□ -0.66
CPNE1-221ENST00000462352 ZFP36L2P47974 494 aaKnown RBP10.95□□□□□ -0.66
CPNE1-221ENST00000462352 CDK9P50750 372 aaKnown RBP10.95□□□□□ -0.66
CPNE1-221ENST00000462352 ATP4BP51164 291 aa10.95□□□□□ -0.66
CPNE1-221ENST00000462352 DGKQP52824 942 aa10.95□□□□□ -0.66
CPNE1-221ENST00000462352 WNT3P56703 355 aa10.95□□□□□ -0.66
CPNE1-221ENST00000462352 PHC1P78364 1004 aa10.95□□□□□ -0.66
CPNE1-221ENST00000462352 IRX1P78414 480 aaPredicted RBP10.95□□□□□ -0.66
CPNE1-221ENST00000462352 DUSP8Q13202 625 aa10.95□□□□□ -0.66
CPNE1-221ENST00000462352 SQLEQ14534 574 aa10.95□□□□□ -0.66
CPNE1-221ENST00000462352 MLC1Q15049 377 aa10.95□□□□□ -0.66
CPNE1-221ENST00000462352 EBPQ15125 230 aaKnown RBP10.95□□□□□ -0.66
CPNE1-221ENST00000462352 ACER2Q5QJU3 275 aa10.95□□□□□ -0.66
CPNE1-221ENST00000462352 FHL5Q5TD97 284 aa10.95□□□□□ -0.66
CPNE1-221ENST00000462352 METTL21CQ5VZV1 264 aa10.95□□□□□ -0.66
CPNE1-221ENST00000462352 TCTN3Q6NUS6 607 aa10.95□□□□□ -0.66
CPNE1-221ENST00000462352 ISLR2Q6UXK2 745 aa10.95□□□□□ -0.66
CPNE1-221ENST00000462352 LINC00696Q6ZRV3 163 aa10.95□□□□□ -0.66
CPNE1-221ENST00000462352 RPS19BP1Q86WX3 136 aaKnown RBP10.95□□□□□ -0.66
CPNE1-221ENST00000462352 ARMC10Q8N2F6 343 aa10.95□□□□□ -0.66
CPNE1-221ENST00000462352 OR52R1Q8NGF1 315 aa10.95□□□□□ -0.66
CPNE1-221ENST00000462352 THAP3Q8WTV1 239 aaPredicted RBP10.95□□□□□ -0.66
CPNE1-221ENST00000462352 C10orf82Q8WW14 230 aa10.95□□□□□ -0.66
CPNE1-221ENST00000462352 OR5P2Q8WZ92 322 aa10.95□□□□□ -0.66
CPNE1-221ENST00000462352 ERP27Q96DN0 273 aa10.95□□□□□ -0.66
CPNE1-221ENST00000462352 ELP4Q96EB1 424 aa10.95□□□□□ -0.66
CPNE1-221ENST00000462352 ZNF354BQ96LW1 612 aa10.95□□□□□ -0.66
CPNE1-221ENST00000462352 SMAD5Q99717 465 aaKnown RBP10.95□□□□□ -0.66
CPNE1-221ENST00000462352 ELAC2Q9BQ52 826 aaKnown RBP10.95□□□□□ -0.66
CPNE1-221ENST00000462352 FAM107BQ9H098 131 aa10.95□□□□□ -0.66
CPNE1-221ENST00000462352 NSRP1Q9H0G5 558 aaKnown RBP10.95□□□□□ -0.66
CPNE1-221ENST00000462352 CDCP1Q9H5V8 836 aa10.95□□□□□ -0.66
CPNE1-221ENST00000462352 ZNF385DQ9H6B1 395 aa10.95□□□□□ -0.66
CPNE1-221ENST00000462352 LIN28AQ9H9Z2 209 aaKnown RBP10.95□□□□□ -0.66
CPNE1-221ENST00000462352 ZBTB20Q9HC78 741 aaPredicted RBP10.95□□□□□ -0.66
CPNE1-221ENST00000462352 BCAP29Q9UHQ4 241 aa10.95□□□□□ -0.66
CPNE1-221ENST00000462352 TEKT2Q9UIF3 430 aa10.95□□□□□ -0.66
CPNE1-221ENST00000462352 PCDHGB7Q9Y5F8 929 aa10.95□□□□□ -0.66
CPNE1-221ENST00000462352 PIEZO2Q9H5I5 2752 aa10.94□□□□□ -0.66
CPNE1-221ENST00000462352 NBEAQ8NFP9 2946 aa10.94□□□□□ -0.66
CPNE1-221ENST00000462352 A0A087WV62 115 aa10.94□□□□□ -0.66
CPNE1-221ENST00000462352 PRSS51A0A1B0GVH4 220 aa10.94□□□□□ -0.66
CPNE1-221ENST00000462352 UPK1AO00322 258 aa10.94□□□□□ -0.66
CPNE1-221ENST00000462352 RNASET2O00584 256 aaKnown RBP10.94□□□□□ -0.66
CPNE1-221ENST00000462352 PRAMEF2O60811 474 aa10.94□□□□□ -0.66
CPNE1-221ENST00000462352 BCAS2O75934 225 aaPredicted RBP10.94□□□□□ -0.66
CPNE1-221ENST00000462352 C6orf47O95873 294 aa10.94□□□□□ -0.66
CPNE1-221ENST00000462352 PGRP06401 933 aa10.94□□□□□ -0.66
CPNE1-221ENST00000462352 IFI6P09912 130 aa10.94□□□□□ -0.66
CPNE1-221ENST00000462352 S100A3P33764 101 aa10.94□□□□□ -0.66
CPNE1-221ENST00000462352 POLR2JP52435 117 aaKnown RBP10.94□□□□□ -0.66
CPNE1-221ENST00000462352 MLF1P58340 268 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms