RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 KRT6BP04259 564 aa17.42■□□□□ 0.38
VARS-220ENST00000461874 RFPL3SP0C7P2 107 aa17.42■□□□□ 0.38
VARS-220ENST00000461874 HSD3B1P14060 373 aa17.42■□□□□ 0.38
VARS-220ENST00000461874 S1PR1P21453 382 aa17.42■□□□□ 0.38
VARS-220ENST00000461874 HSD3B2P26439 372 aa17.42■□□□□ 0.38
VARS-220ENST00000461874 ACVR2AP27037 513 aa17.42■□□□□ 0.38
VARS-220ENST00000461874 DEKP35659 375 aaKnown RBP17.42■□□□□ 0.38
VARS-220ENST00000461874 KRT6CP48668 564 aa17.42■□□□□ 0.38
VARS-220ENST00000461874 MAN2A2P49641 1150 aa17.42■□□□□ 0.38
VARS-220ENST00000461874 PRKAA2P54646 552 aa17.42■□□□□ 0.38
VARS-220ENST00000461874 PMPCAQ10713 525 aa17.42■□□□□ 0.38
VARS-220ENST00000461874 RASA2Q15283 850 aa17.42■□□□□ 0.38
VARS-220ENST00000461874 TCHHL1Q5QJ38 904 aaPredicted RBP17.42■□□□□ 0.38
VARS-220ENST00000461874 C6orf163Q5TEZ5 329 aa17.42■□□□□ 0.38
VARS-220ENST00000461874 GPRIN3Q6ZVF9 776 aa17.42■□□□□ 0.38
VARS-220ENST00000461874 ACAD11Q709F0 780 aa17.42■□□□□ 0.38
VARS-220ENST00000461874 ZNF295-AS1Q8N0V1 137 aa17.42■□□□□ 0.38
VARS-220ENST00000461874 MMP21Q8N119 569 aa17.42■□□□□ 0.38
VARS-220ENST00000461874 LRRC25Q8N386 305 aaPredicted RBP17.42■□□□□ 0.38
VARS-220ENST00000461874 C1orf52Q8N6N3 182 aaKnown RBP17.42■□□□□ 0.38
VARS-220ENST00000461874 OR5M3Q8NGP4 307 aa17.42■□□□□ 0.38
VARS-220ENST00000461874 LILRB4Q8NHJ6 448 aa17.42■□□□□ 0.38
VARS-220ENST00000461874 CHTF18Q8WVB6 975 aa17.42■□□□□ 0.38
VARS-220ENST00000461874 ENKD1Q9H0I2 346 aa17.42■□□□□ 0.38
VARS-220ENST00000461874 LDAHQ9H6V9 325 aa17.42■□□□□ 0.38
VARS-220ENST00000461874 ZNF703Q9H7S9 590 aaPredicted RBP17.42■□□□□ 0.38
VARS-220ENST00000461874 PSMC3IPQ9P2W1 217 aaPredicted RBP17.42■□□□□ 0.38
VARS-220ENST00000461874 TNFRSF10DQ9UBN6 386 aa17.42■□□□□ 0.38
VARS-220ENST00000461874 NPFFR2Q9Y5X5 522 aa17.42■□□□□ 0.38
VARS-220ENST00000461874 TRGV5A0A0B4J1U4 118 aa17.41■□□□□ 0.38
VARS-220ENST00000461874 ANKRD33BA6NCL7 494 aa17.41■□□□□ 0.38
VARS-220ENST00000461874 GOLGA8RI6L899 631 aa17.41■□□□□ 0.38
VARS-220ENST00000461874 LRATO95237 230 aa17.41■□□□□ 0.38
VARS-220ENST00000461874 GSTA1P08263 222 aa17.41■□□□□ 0.38
VARS-220ENST00000461874 CHRNB4P30926 498 aa17.41■□□□□ 0.38
VARS-220ENST00000461874 NUP107P57740 925 aa17.41■□□□□ 0.38
VARS-220ENST00000461874 FBXW4P57775 412 aa17.41■□□□□ 0.38
VARS-220ENST00000461874 TRA2BP62995 288 aaKnown RBP17.41■□□□□ 0.38
VARS-220ENST00000461874 MGAT2Q10469 447 aa17.41■□□□□ 0.38
VARS-220ENST00000461874 MAP4K2Q12851 820 aa17.41■□□□□ 0.38
VARS-220ENST00000461874 RPS6KA2Q15349 733 aa17.41■□□□□ 0.38
VARS-220ENST00000461874 ZNF585AQ6P3V2 769 aa17.41■□□□□ 0.38
VARS-220ENST00000461874 SLC22A9Q8IVM8 553 aa17.41■□□□□ 0.38
VARS-220ENST00000461874 CNPY4Q8N129 248 aa17.41■□□□□ 0.38
VARS-220ENST00000461874 C17orf47Q8NEP4 570 aa17.41■□□□□ 0.38
VARS-220ENST00000461874 MZB1Q8WU39 189 aa17.41■□□□□ 0.38
VARS-220ENST00000461874 SARAFQ96BY9 339 aa17.41■□□□□ 0.38
VARS-220ENST00000461874 DOHHQ9BU89 302 aa17.41■□□□□ 0.38
VARS-220ENST00000461874 ACAD8Q9UKU7 415 aa17.41■□□□□ 0.38
VARS-220ENST00000461874 PSME2Q9UL46 239 aa17.41■□□□□ 0.38
VARS-220ENST00000461874 DCHS2Q6V1P9 2916 aa17.41■□□□□ 0.38
VARS-220ENST00000461874 FIGNL2A6NMB9 653 aa17.4■□□□□ 0.38
VARS-220ENST00000461874 TP53I11O14683 189 aa17.4■□□□□ 0.38
VARS-220ENST00000461874 TRIM3O75382 744 aaPredicted RBP17.4■□□□□ 0.38
VARS-220ENST00000461874 ULK1O75385 1050 aa17.4■□□□□ 0.38
VARS-220ENST00000461874 ERAL1O75616 437 aaKnown RBP17.4■□□□□ 0.38
VARS-220ENST00000461874 ATP1B1P05026 303 aa17.4■□□□□ 0.38
VARS-220ENST00000461874 PYGBP11216 843 aa17.4■□□□□ 0.38
VARS-220ENST00000461874 CHN1P15882 459 aa17.4■□□□□ 0.38
VARS-220ENST00000461874 CSNK2A2P19784 350 aaPredicted RBP17.4■□□□□ 0.38
VARS-220ENST00000461874 ENDOUP21128 410 aaKnown RBP17.4■□□□□ 0.38
VARS-220ENST00000461874 FEN1P39748 380 aaKnown RBP17.4■□□□□ 0.38
VARS-220ENST00000461874 NRG3P56975 720 aa17.4■□□□□ 0.38
VARS-220ENST00000461874 CSTF3Q12996 717 aaKnown RBP17.4■□□□□ 0.38
VARS-220ENST00000461874 PRICKLE4Q2TBC4 344 aa17.4■□□□□ 0.38
VARS-220ENST00000461874 TBCELQ5QJ74 424 aa17.4■□□□□ 0.38
VARS-220ENST00000461874 CCDC71Q8IV32 467 aaPredicted RBP17.4■□□□□ 0.38
VARS-220ENST00000461874 VWA5B2Q8N398 1253 aa17.4■□□□□ 0.38
VARS-220ENST00000461874 METTL6Q8TCB7 284 aa17.4■□□□□ 0.38
VARS-220ENST00000461874 SPPL2AQ8TCT8 520 aa17.4■□□□□ 0.38
VARS-220ENST00000461874 DIO2Q92813 273 aa17.4■□□□□ 0.38
VARS-220ENST00000461874 L3HYPDHQ96EM0 354 aa17.4■□□□□ 0.38
VARS-220ENST00000461874 JSRP1Q96MG2 331 aaPredicted RBP17.4■□□□□ 0.38
VARS-220ENST00000461874 SECISBP2Q96T21 854 aaKnown RBP17.4■□□□□ 0.38
VARS-220ENST00000461874 FAIM2Q9BWQ8 316 aa17.4■□□□□ 0.38
VARS-220ENST00000461874 EXO5Q9H790 373 aa17.4■□□□□ 0.38
VARS-220ENST00000461874 ACKR4Q9NPB9 350 aa17.4■□□□□ 0.38
VARS-220ENST00000461874 QPCTLQ9NXS2 382 aa17.4■□□□□ 0.38
VARS-220ENST00000461874 MAT2BQ9NZL9 334 aa17.4■□□□□ 0.38
VARS-220ENST00000461874 SPRR3Q9UBC9 169 aa17.4■□□□□ 0.38
VARS-220ENST00000461874 STK38LQ9Y2H1 464 aa17.4■□□□□ 0.38
VARS-220ENST00000461874 FAM215AQ9Y5M1 114 aa17.4■□□□□ 0.38
VARS-220ENST00000461874 GPX3P22352 226 aa17.39■□□□□ 0.37
VARS-220ENST00000461874 SOX18P35713 384 aa17.39■□□□□ 0.37
VARS-220ENST00000461874 TMED10P49755 219 aaKnown RBP17.39■□□□□ 0.37
VARS-220ENST00000461874 LCP2Q13094 533 aa17.39■□□□□ 0.37
VARS-220ENST00000461874 RTL6Q6ICC9 239 aa17.39■□□□□ 0.37
VARS-220ENST00000461874 FAM111BQ6SJ93 734 aa17.39■□□□□ 0.37
VARS-220ENST00000461874 GBP7Q8N8V2 638 aaPredicted RBP17.39■□□□□ 0.37
VARS-220ENST00000461874 KLHL29Q96CT2 875 aa17.39■□□□□ 0.37
VARS-220ENST00000461874 CNRIP1Q96F85 164 aaPredicted RBP17.39■□□□□ 0.37
VARS-220ENST00000461874 ZNF681Q96N22 645 aa17.39■□□□□ 0.37
VARS-220ENST00000461874 TREX2Q9BQ50 279 aaPredicted RBP17.39■□□□□ 0.37
VARS-220ENST00000461874 TTYH2Q9BSA4 534 aa17.39■□□□□ 0.37
VARS-220ENST00000461874 UCK2Q9BZX2 261 aa17.39■□□□□ 0.37
VARS-220ENST00000461874 BRINP2Q9C0B6 783 aa17.39■□□□□ 0.37
VARS-220ENST00000461874 B4GALT7Q9UBV7 327 aa17.39■□□□□ 0.37
VARS-220ENST00000461874 TBK1Q9UHD2 729 aa17.39■□□□□ 0.37
VARS-220ENST00000461874 DCDC2Q9UHG0 476 aa17.39■□□□□ 0.37
VARS-220ENST00000461874 ZNF639Q9UID6 485 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms