RNA–Protein interactions for RNA: ENST00000461578.1

PABPC4-208, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 5

Gene PABPC4, Length 193 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-208ENST00000461578 PCDH1Q08174 1060 aa12.5□□□□□ -0.41
PABPC4-208ENST00000461578 BIKQ13323 160 aa12.5□□□□□ -0.41
PABPC4-208ENST00000461578 LAPTM5Q13571 262 aa12.5□□□□□ -0.41
PABPC4-208ENST00000461578 DDX39BQ13838 428 aaKnown RBP12.5□□□□□ -0.41
PABPC4-208ENST00000461578 TMEM35AQ53FP2 167 aa12.5□□□□□ -0.41
PABPC4-208ENST00000461578 TIGD3Q6B0B8 471 aa12.5□□□□□ -0.41
PABPC4-208ENST00000461578 DESI1Q6ICB0 168 aa12.5□□□□□ -0.41
PABPC4-208ENST00000461578 OR4C11Q6IEV9 310 aa12.5□□□□□ -0.41
PABPC4-208ENST00000461578 ZNF550Q7Z398 422 aa12.5□□□□□ -0.41
PABPC4-208ENST00000461578 ZC3HC1Q86WB0 502 aaKnown RBP12.5□□□□□ -0.41
PABPC4-208ENST00000461578 GRAMD2AQ8IUY3 354 aa12.5□□□□□ -0.41
PABPC4-208ENST00000461578 TCAIMQ8N3R3 496 aa12.5□□□□□ -0.41
PABPC4-208ENST00000461578 MAPK1IP1LQ8NDC0 245 aa12.5□□□□□ -0.41
PABPC4-208ENST00000461578 OR14L1PQ8NHC6 308 aa12.5□□□□□ -0.41
PABPC4-208ENST00000461578 EXT2Q93063 718 aa12.5□□□□□ -0.41
PABPC4-208ENST00000461578 WNT2BQ93097 391 aa12.5□□□□□ -0.41
PABPC4-208ENST00000461578 NTNG2Q96CW9 530 aa12.5□□□□□ -0.41
PABPC4-208ENST00000461578 WDR34Q96EX3 536 aa12.5□□□□□ -0.41
PABPC4-208ENST00000461578 PELOQ9BRX2 385 aaKnown RBP12.5□□□□□ -0.41
PABPC4-208ENST00000461578 NAT9Q9BTE0 207 aa12.5□□□□□ -0.41
PABPC4-208ENST00000461578 GSX2Q9BZM3 304 aa12.5□□□□□ -0.41
PABPC4-208ENST00000461578 METTL7AQ9H8H3 244 aa12.5□□□□□ -0.41
PABPC4-208ENST00000461578 CNOT10Q9H9A5 744 aaKnown RBP12.5□□□□□ -0.41
PABPC4-208ENST00000461578 MS4A12Q9NXJ0 267 aa12.5□□□□□ -0.41
PABPC4-208ENST00000461578 CLCF1Q9UBD9 225 aa12.5□□□□□ -0.41
PABPC4-208ENST00000461578 MAPRE3Q9UPY8 281 aa12.5□□□□□ -0.41
PABPC4-208ENST00000461578 RAI1Q7Z5J4 1906 aaPredicted RBP12.49□□□□□ -0.41
PABPC4-208ENST00000461578 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.49□□□□□ -0.41
PABPC4-208ENST00000461578 A0A1W2PNV4 684 aa12.49□□□□□ -0.41
PABPC4-208ENST00000461578 A0A1W2PS29 197 aa12.49□□□□□ -0.41
PABPC4-208ENST00000461578 TNFSF13O75888 250 aa12.49□□□□□ -0.41
PABPC4-208ENST00000461578 GPR75O95800 540 aa12.49□□□□□ -0.41
PABPC4-208ENST00000461578 C8BP07358 591 aa12.49□□□□□ -0.41
PABPC4-208ENST00000461578 CPN1P15169 458 aa12.49□□□□□ -0.41
PABPC4-208ENST00000461578 KRT15P19012 456 aa12.49□□□□□ -0.41
PABPC4-208ENST00000461578 EPORP19235 508 aa12.49□□□□□ -0.41
PABPC4-208ENST00000461578 CRYGSP22914 178 aa12.49□□□□□ -0.41
PABPC4-208ENST00000461578 BUD31P41223 144 aaPredicted RBP12.49□□□□□ -0.41
PABPC4-208ENST00000461578 MC3RP41968 323 aa12.49□□□□□ -0.41
PABPC4-208ENST00000461578 NRG3P56975 720 aa12.49□□□□□ -0.41
PABPC4-208ENST00000461578 KRTAP1-1Q07627 177 aa12.49□□□□□ -0.41
PABPC4-208ENST00000461578 PPP1R7Q15435 360 aa12.49□□□□□ -0.41
PABPC4-208ENST00000461578 NNATQ16517 81 aa12.49□□□□□ -0.41
PABPC4-208ENST00000461578 KHDRBS2Q5VWX1 349 aaKnown RBP12.49□□□□□ -0.41
PABPC4-208ENST00000461578 ENPP6Q6UWR7 440 aa12.49□□□□□ -0.41
PABPC4-208ENST00000461578 C20orf204Q6ZNR8 217 aa12.49□□□□□ -0.41
PABPC4-208ENST00000461578 ADGRE4PQ86SQ3 457 aa12.49□□□□□ -0.41
PABPC4-208ENST00000461578 GPSM1Q86YR5 675 aa12.49□□□□□ -0.41
PABPC4-208ENST00000461578 TRIM42Q8IWZ5 723 aa12.49□□□□□ -0.41
PABPC4-208ENST00000461578 CNEP1R1Q8N9A8 125 aa12.49□□□□□ -0.41
PABPC4-208ENST00000461578 UCN3Q969E3 161 aa12.49□□□□□ -0.41
PABPC4-208ENST00000461578 TP53INP1Q96A56 240 aa12.49□□□□□ -0.41
PABPC4-208ENST00000461578 SECISBP2Q96T21 854 aaKnown RBP12.49□□□□□ -0.41
PABPC4-208ENST00000461578 G6PC3Q9BUM1 346 aa12.49□□□□□ -0.41
PABPC4-208ENST00000461578 RBSNQ9H1K0 784 aa12.49□□□□□ -0.41
PABPC4-208ENST00000461578 ACBD3Q9H3P7 528 aa12.49□□□□□ -0.41
PABPC4-208ENST00000461578 GALNT9Q9HCQ5 603 aa12.49□□□□□ -0.41
PABPC4-208ENST00000461578 SERHLQ9NQF3 203 aa12.49□□□□□ -0.41
PABPC4-208ENST00000461578 CD274Q9NZQ7 290 aa12.49□□□□□ -0.41
PABPC4-208ENST00000461578 PHF11Q9UIL8 331 aa12.49□□□□□ -0.41
PABPC4-208ENST00000461578 SONP18583 2426 aaKnown RBP12.49□□□□□ -0.41
PABPC4-208ENST00000461578 DNALI1O14645 258 aaPredicted RBP12.48□□□□□ -0.41
PABPC4-208ENST00000461578 CT62P0C5K7 136 aa12.48□□□□□ -0.41
PABPC4-208ENST00000461578 TCEA1P23193 301 aaKnown RBP12.48□□□□□ -0.41
PABPC4-208ENST00000461578 GGT5P36269 586 aa12.48□□□□□ -0.41
PABPC4-208ENST00000461578 CD79BP40259 229 aa12.48□□□□□ -0.41
PABPC4-208ENST00000461578 RPS13P62277 151 aaKnown RBP12.48□□□□□ -0.41
PABPC4-208ENST00000461578 GAB1Q13480 694 aa12.48□□□□□ -0.41
PABPC4-208ENST00000461578 SULT1C3Q6IMI6 304 aa12.48□□□□□ -0.41
PABPC4-208ENST00000461578 MED27Q6P2C8 311 aa12.48□□□□□ -0.41
PABPC4-208ENST00000461578 VWA1Q6PCB0 445 aa12.48□□□□□ -0.41
PABPC4-208ENST00000461578 P4HA3Q7Z4N8 544 aa12.48□□□□□ -0.41
PABPC4-208ENST00000461578 RGMAQ96B86 450 aa12.48□□□□□ -0.41
PABPC4-208ENST00000461578 CMTM7Q96FZ5 175 aa12.48□□□□□ -0.41
PABPC4-208ENST00000461578 OSBPL11Q9BXB4 747 aa12.48□□□□□ -0.41
PABPC4-208ENST00000461578 OPN3Q9H1Y3 402 aaPredicted RBP12.48□□□□□ -0.41
PABPC4-208ENST00000461578 RYDENQ9NUL5 291 aaKnown RBP12.48□□□□□ -0.41
PABPC4-208ENST00000461578 FETUBQ9UGM5 382 aa12.48□□□□□ -0.41
PABPC4-208ENST00000461578 ASIC3Q9UHC3 531 aa12.48□□□□□ -0.41
PABPC4-208ENST00000461578 MXRA5Q9NR99 2828 aa12.48□□□□□ -0.41
PABPC4-208ENST00000461578 PLOD2O00469 737 aa12.47□□□□□ -0.41
PABPC4-208ENST00000461578 PLPP1O14494 284 aa12.47□□□□□ -0.41
PABPC4-208ENST00000461578 MSTNO14793 375 aa12.47□□□□□ -0.41
PABPC4-208ENST00000461578 TGM6O95932 706 aa12.47□□□□□ -0.41
PABPC4-208ENST00000461578 ABCB1P08183 1280 aaPredicted RBP12.47□□□□□ -0.41
PABPC4-208ENST00000461578 NR2F6P10588 404 aa12.47□□□□□ -0.41
PABPC4-208ENST00000461578 EPB42P16452 691 aa12.47□□□□□ -0.41
PABPC4-208ENST00000461578 ABCD3P28288 659 aa12.47□□□□□ -0.41
PABPC4-208ENST00000461578 CCKARP32238 428 aa12.47□□□□□ -0.41
PABPC4-208ENST00000461578 CASP2P42575 452 aa12.47□□□□□ -0.41
PABPC4-208ENST00000461578 SIRPAP78324 504 aa12.47□□□□□ -0.41
PABPC4-208ENST00000461578 DMTNQ08495 405 aa12.47□□□□□ -0.41
PABPC4-208ENST00000461578 TNK1Q13470 666 aa12.47□□□□□ -0.41
PABPC4-208ENST00000461578 OR4D1Q15615 310 aa12.47□□□□□ -0.41
PABPC4-208ENST00000461578 CYP1B1Q16678 543 aa12.47□□□□□ -0.41
PABPC4-208ENST00000461578 C10orf62Q5T681 223 aaPredicted RBP12.47□□□□□ -0.41
PABPC4-208ENST00000461578 DEPDC1Q5TB30 811 aa12.47□□□□□ -0.41
PABPC4-208ENST00000461578 ZNF474Q6S9Z5 364 aaPredicted RBP12.47□□□□□ -0.41
PABPC4-208ENST00000461578 PLEKHM3Q6ZWE6 761 aa12.47□□□□□ -0.41
PABPC4-208ENST00000461578 IFNEQ86WN2 208 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms