RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 TUBGCP3Q96CW5 907 aa12.29□□□□□ -0.44
RAB11FIP3-207ENST00000461009 FBXL20Q96IG2 436 aa12.29□□□□□ -0.44
RAB11FIP3-207ENST00000461009 MAGED4Q96JG8 741 aa12.29□□□□□ -0.44
RAB11FIP3-207ENST00000461009 SIGLEC12Q96PQ1 595 aa12.29□□□□□ -0.44
RAB11FIP3-207ENST00000461009 SORT1Q99523 831 aa12.29□□□□□ -0.44
RAB11FIP3-207ENST00000461009 CNPPD1Q9BV87 410 aa12.29□□□□□ -0.44
RAB11FIP3-207ENST00000461009 ZNF395Q9H8N7 513 aaPredicted RBP12.29□□□□□ -0.44
RAB11FIP3-207ENST00000461009 CXorf21Q9HAI6 301 aa12.29□□□□□ -0.44
RAB11FIP3-207ENST00000461009 RYDENQ9NUL5 291 aaKnown RBP12.29□□□□□ -0.44
RAB11FIP3-207ENST00000461009 HEY2Q9UBP5 337 aa12.29□□□□□ -0.44
RAB11FIP3-207ENST00000461009 ENTPD4Q9Y227 616 aa12.29□□□□□ -0.44
RAB11FIP3-207ENST00000461009 YARS2Q9Y2Z4 477 aaKnown RBP12.29□□□□□ -0.44
RAB11FIP3-207ENST00000461009 SPTBN1Q01082 2364 aaKnown RBP12.28□□□□□ -0.44
RAB11FIP3-207ENST00000461009 UQCRHLA0A096LP55 91 aa12.28□□□□□ -0.44
RAB11FIP3-207ENST00000461009 OR6C76A6NM76 312 aa12.28□□□□□ -0.44
RAB11FIP3-207ENST00000461009 SLCO1B7G3V0H7 640 aa12.28□□□□□ -0.44
RAB11FIP3-207ENST00000461009 CCL21O00585 134 aa12.28□□□□□ -0.44
RAB11FIP3-207ENST00000461009 KLF11O14901 512 aa12.28□□□□□ -0.44
RAB11FIP3-207ENST00000461009 PEX11AO75192 247 aa12.28□□□□□ -0.44
RAB11FIP3-207ENST00000461009 SLC25A12O75746 678 aa12.28□□□□□ -0.44
RAB11FIP3-207ENST00000461009 BCAS2O75934 225 aaPredicted RBP12.28□□□□□ -0.44
RAB11FIP3-207ENST00000461009 ATP1B1P05026 303 aa12.28□□□□□ -0.44
RAB11FIP3-207ENST00000461009 ESRRAP11474 423 aaPredicted RBP12.28□□□□□ -0.44
RAB11FIP3-207ENST00000461009 PRPS2P11908 318 aa12.28□□□□□ -0.44
RAB11FIP3-207ENST00000461009 FEN1P39748 380 aaKnown RBP12.28□□□□□ -0.44
RAB11FIP3-207ENST00000461009 ERVK-8P63133 956 aa12.28□□□□□ -0.44
RAB11FIP3-207ENST00000461009 PPP2R2AP63151 447 aa12.28□□□□□ -0.44
RAB11FIP3-207ENST00000461009 RPL38P63173 70 aaKnown RBP12.28□□□□□ -0.44
RAB11FIP3-207ENST00000461009 SRSF11Q05519 484 aaKnown RBP12.28□□□□□ -0.44
RAB11FIP3-207ENST00000461009 PDCD2Q16342 344 aaPredicted RBP12.28□□□□□ -0.44
RAB11FIP3-207ENST00000461009 SMU1Q2TAY7 513 aa12.28□□□□□ -0.44
RAB11FIP3-207ENST00000461009 RFTN2Q52LD8 501 aaPredicted RBP12.28□□□□□ -0.44
RAB11FIP3-207ENST00000461009 XKR7Q5GH72 579 aa12.28□□□□□ -0.44
RAB11FIP3-207ENST00000461009 HIST2H2BCQ6DN03 193 aa12.28□□□□□ -0.44
RAB11FIP3-207ENST00000461009 SLC29A4Q7RTT9 530 aa12.28□□□□□ -0.44
RAB11FIP3-207ENST00000461009 GALNT12Q8IXK2 581 aa12.28□□□□□ -0.44
RAB11FIP3-207ENST00000461009 MMP21Q8N119 569 aa12.28□□□□□ -0.44
RAB11FIP3-207ENST00000461009 ARMC10Q8N2F6 343 aa12.28□□□□□ -0.44
RAB11FIP3-207ENST00000461009 LRRC25Q8N386 305 aaPredicted RBP12.28□□□□□ -0.44
RAB11FIP3-207ENST00000461009 TMEM156Q8N614 296 aa12.28□□□□□ -0.44
RAB11FIP3-207ENST00000461009 AMER2Q8N7J2 671 aa12.28□□□□□ -0.44
RAB11FIP3-207ENST00000461009 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.28□□□□□ -0.44
RAB11FIP3-207ENST00000461009 THAP3Q8WTV1 239 aaPredicted RBP12.28□□□□□ -0.44
RAB11FIP3-207ENST00000461009 ZNF75CPQ92670 426 aaPredicted RBP12.28□□□□□ -0.44
RAB11FIP3-207ENST00000461009 EXOSC8Q96B26 276 aaKnown RBP12.28□□□□□ -0.44
RAB11FIP3-207ENST00000461009 SCMH1Q96GD3 660 aa12.28□□□□□ -0.44
RAB11FIP3-207ENST00000461009 FCRL1Q96LA6 429 aa12.28□□□□□ -0.44
RAB11FIP3-207ENST00000461009 BBS4Q96RK4 519 aa12.28□□□□□ -0.44
RAB11FIP3-207ENST00000461009 C20orf27Q9GZN8 174 aa12.28□□□□□ -0.44
RAB11FIP3-207ENST00000461009 SLC35C2Q9NQQ7 365 aa12.28□□□□□ -0.44
RAB11FIP3-207ENST00000461009 TAS2R7Q9NYW3 318 aa12.28□□□□□ -0.44
RAB11FIP3-207ENST00000461009 MYOTQ9UBF9 498 aa12.28□□□□□ -0.44
RAB11FIP3-207ENST00000461009 ERVK-19Q9WJR5 959 aa12.28□□□□□ -0.44
RAB11FIP3-207ENST00000461009 EIF3LQ9Y262 564 aaKnown RBP12.28□□□□□ -0.44
RAB11FIP3-207ENST00000461009 HIVEP3Q5T1R4 2406 aa12.28□□□□□ -0.44
RAB11FIP3-207ENST00000461009 ATP6AP2A0A1C7CYW4 349 aa12.27□□□□□ -0.45
RAB11FIP3-207ENST00000461009 KLRC4-KLRK1H3BQV0 150 aa12.27□□□□□ -0.45
RAB11FIP3-207ENST00000461009 ZG16O60844 167 aa12.27□□□□□ -0.45
RAB11FIP3-207ENST00000461009 SNNO75324 88 aaPredicted RBP12.27□□□□□ -0.45
RAB11FIP3-207ENST00000461009 ATP6AP2O75787 350 aa12.27□□□□□ -0.45
RAB11FIP3-207ENST00000461009 SASH3O75995 380 aa12.27□□□□□ -0.45
RAB11FIP3-207ENST00000461009 BCKDHAP12694 445 aa12.27□□□□□ -0.45
RAB11FIP3-207ENST00000461009 MST1P26927 711 aa12.27□□□□□ -0.45
RAB11FIP3-207ENST00000461009 RPL3P39023 403 aaKnown RBP12.27□□□□□ -0.45
RAB11FIP3-207ENST00000461009 HLCSP50747 726 aa12.27□□□□□ -0.45
RAB11FIP3-207ENST00000461009 SSR4P51571 173 aa12.27□□□□□ -0.45
RAB11FIP3-207ENST00000461009 RNF4P78317 190 aa12.27□□□□□ -0.45
RAB11FIP3-207ENST00000461009 PMP22Q01453 160 aa12.27□□□□□ -0.45
RAB11FIP3-207ENST00000461009 MAP4K2Q12851 820 aa12.27□□□□□ -0.45
RAB11FIP3-207ENST00000461009 C6orf136Q5SQH8 315 aa12.27□□□□□ -0.45
RAB11FIP3-207ENST00000461009 RPTNQ6XPR3 784 aa12.27□□□□□ -0.45
RAB11FIP3-207ENST00000461009 RNF111Q6ZNA4 994 aa12.27□□□□□ -0.45
RAB11FIP3-207ENST00000461009 GALNTL5Q7Z4T8 443 aa12.27□□□□□ -0.45
RAB11FIP3-207ENST00000461009 R3HCC1LQ7Z5L2 792 aaKnown RBP12.27□□□□□ -0.45
RAB11FIP3-207ENST00000461009 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.27□□□□□ -0.45
RAB11FIP3-207ENST00000461009 CCDC116Q8IYX3 515 aa12.27□□□□□ -0.45
RAB11FIP3-207ENST00000461009 EID3Q8N140 333 aa12.27□□□□□ -0.45
RAB11FIP3-207ENST00000461009 FNDC5Q8NAU1 212 aa12.27□□□□□ -0.45
RAB11FIP3-207ENST00000461009 POGLUT1Q8NBL1 392 aa12.27□□□□□ -0.45
RAB11FIP3-207ENST00000461009 OR7G1Q8NGA0 311 aa12.27□□□□□ -0.45
RAB11FIP3-207ENST00000461009 NUBPLQ8TB37 319 aa12.27□□□□□ -0.45
RAB11FIP3-207ENST00000461009 LRRC8CQ8TDW0 803 aa12.27□□□□□ -0.45
RAB11FIP3-207ENST00000461009 C3orf30Q96M34 536 aa12.27□□□□□ -0.45
RAB11FIP3-207ENST00000461009 GPR137Q96N19 417 aa12.27□□□□□ -0.45
RAB11FIP3-207ENST00000461009 ZNF681Q96N22 645 aa12.27□□□□□ -0.45
RAB11FIP3-207ENST00000461009 NPAS2Q99743 824 aa12.27□□□□□ -0.45
RAB11FIP3-207ENST00000461009 BRINP2Q9C0B6 783 aa12.27□□□□□ -0.45
RAB11FIP3-207ENST00000461009 INTS9Q9NV88 658 aaKnown RBP12.27□□□□□ -0.45
RAB11FIP3-207ENST00000461009 PNPOQ9NVS9 261 aa12.27□□□□□ -0.45
RAB11FIP3-207ENST00000461009 MAPRE3Q9UPY8 281 aa12.27□□□□□ -0.45
RAB11FIP3-207ENST00000461009 CFL2Q9Y281 166 aa12.27□□□□□ -0.45
RAB11FIP3-207ENST00000461009 KLF13Q9Y2Y9 288 aaPredicted RBP12.27□□□□□ -0.45
RAB11FIP3-207ENST00000461009 ZGRF1Q86YA3 2104 aa12.26□□□□□ -0.45
RAB11FIP3-207ENST00000461009 ASPDHA6ND91 283 aa12.26□□□□□ -0.45
RAB11FIP3-207ENST00000461009 TRPC5OSA6NMA1 111 aa12.26□□□□□ -0.45
RAB11FIP3-207ENST00000461009 NPIPA5E9PKD4 350 aa12.26□□□□□ -0.45
RAB11FIP3-207ENST00000461009 ATP8B1O43520 1251 aa12.26□□□□□ -0.45
RAB11FIP3-207ENST00000461009 SLC19A2O60779 497 aa12.26□□□□□ -0.45
RAB11FIP3-207ENST00000461009 ITGA10O75578 1167 aa12.26□□□□□ -0.45
RAB11FIP3-207ENST00000461009 NEURL1O76050 574 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms