RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 KLF5Q13887 457 aaPredicted RBP2.73□□□□□ -1.97
RFC4-211ENST00000460408 LPAL2Q16609 132 aa2.73□□□□□ -1.97
RFC4-211ENST00000460408 ECSCRQ19T08 205 aa2.73□□□□□ -1.97
RFC4-211ENST00000460408 ZNF528Q3MIS6 628 aa2.73□□□□□ -1.97
RFC4-211ENST00000460408 GPAT3Q53EU6 434 aa2.73□□□□□ -1.97
RFC4-211ENST00000460408 MUC21Q5SSG8 566 aa2.73□□□□□ -1.97
RFC4-211ENST00000460408 LIPJQ5W064 366 aa2.73□□□□□ -1.97
RFC4-211ENST00000460408 RTL6Q6ICC9 239 aa2.73□□□□□ -1.97
RFC4-211ENST00000460408 RHBDD2Q6NTF9 364 aa2.73□□□□□ -1.97
RFC4-211ENST00000460408 NEK5Q6P3R8 708 aa2.73□□□□□ -1.97
RFC4-211ENST00000460408 CDHR3Q6ZTQ4 885 aa2.73□□□□□ -1.97
RFC4-211ENST00000460408 KRTAP5-2Q701N4 177 aa2.73□□□□□ -1.97
RFC4-211ENST00000460408 GPR142Q7Z601 462 aa2.73□□□□□ -1.97
RFC4-211ENST00000460408 RNF130Q86XS8 419 aa2.73□□□□□ -1.97
RFC4-211ENST00000460408 BATF2Q8N1L9 274 aa2.73□□□□□ -1.97
RFC4-211ENST00000460408 ZNF781Q8N8C0 355 aa2.73□□□□□ -1.97
RFC4-211ENST00000460408 BANPQ8N9N5 519 aa2.73□□□□□ -1.97
RFC4-211ENST00000460408 RELL2Q8NC24 303 aaPredicted RBP2.73□□□□□ -1.97
RFC4-211ENST00000460408 OR1K1Q8NGR3 316 aa2.73□□□□□ -1.97
RFC4-211ENST00000460408 CCDC47Q96A33 483 aaKnown RBP2.73□□□□□ -1.97
RFC4-211ENST00000460408 COG3Q96JB2 828 aa2.73□□□□□ -1.97
RFC4-211ENST00000460408 CDHR1Q96JP9 859 aa2.73□□□□□ -1.97
RFC4-211ENST00000460408 ZNF597Q96LX8 424 aa2.73□□□□□ -1.97
RFC4-211ENST00000460408 ATOH8Q96SQ7 321 aa2.73□□□□□ -1.97
RFC4-211ENST00000460408 CHCHD5Q9BSY4 110 aa2.73□□□□□ -1.97
RFC4-211ENST00000460408 STRADBQ9C0K7 418 aa2.73□□□□□ -1.97
RFC4-211ENST00000460408 DDX47Q9H0S4 455 aaKnown RBP2.73□□□□□ -1.97
RFC4-211ENST00000460408 SIRPDQ9H106 197 aa2.73□□□□□ -1.97
RFC4-211ENST00000460408 PANK3Q9H999 370 aa2.73□□□□□ -1.97
RFC4-211ENST00000460408 SLC25A19Q9HC21 320 aa2.73□□□□□ -1.97
RFC4-211ENST00000460408 NDUFA13Q9P0J0 144 aa2.73□□□□□ -1.97
RFC4-211ENST00000460408 KCNN3Q9UGI6 736 aa2.73□□□□□ -1.97
RFC4-211ENST00000460408 FAM153AQ9UHL3 310 aa2.73□□□□□ -1.97
RFC4-211ENST00000460408 PTPRUQ92729 1446 aa2.73□□□□□ -1.97
RFC4-211ENST00000460408 SIGLEC1Q9BZZ2 1709 aa2.73□□□□□ -1.97
RFC4-211ENST00000460408 KIF7Q2M1P5 1343 aa2.72□□□□□ -1.97
RFC4-211ENST00000460408 A2ML1A8K2U0 1454 aa2.72□□□□□ -1.97
RFC4-211ENST00000460408 LRP6O75581 1613 aa2.72□□□□□ -1.97
RFC4-211ENST00000460408 IGHV3-16A0A0C4DH30 117 aa2.72□□□□□ -1.97
RFC4-211ENST00000460408 TMEM89A2RUT3 159 aa2.72□□□□□ -1.97
RFC4-211ENST00000460408 MEI4A8MW99 385 aa2.72□□□□□ -1.97
RFC4-211ENST00000460408 TMCO5BA8MYB1 307 aa2.72□□□□□ -1.97
RFC4-211ENST00000460408 NEDD8-MDP1E9PL57 170 aa2.72□□□□□ -1.97
RFC4-211ENST00000460408 NPHP4O75161 1426 aaPredicted RBP2.72□□□□□ -1.97
RFC4-211ENST00000460408 SEC22BO75396 215 aa2.72□□□□□ -1.97
RFC4-211ENST00000460408 SEMA4FO95754 770 aa2.72□□□□□ -1.97
RFC4-211ENST00000460408 TBX6O95947 436 aaPredicted RBP2.72□□□□□ -1.97
RFC4-211ENST00000460408 PGK2P07205 417 aa2.72□□□□□ -1.97
RFC4-211ENST00000460408 LMO2P25791 158 aa2.72□□□□□ -1.97
RFC4-211ENST00000460408 OXTRP30559 389 aa2.72□□□□□ -1.97
RFC4-211ENST00000460408 SFNP31947 248 aa2.72□□□□□ -1.97
RFC4-211ENST00000460408 NDST1P52848 882 aa2.72□□□□□ -1.97
RFC4-211ENST00000460408 NLRP11P59045 1033 aaKnown RBP2.72□□□□□ -1.97
RFC4-211ENST00000460408 SSTP61278 116 aa2.72□□□□□ -1.97
RFC4-211ENST00000460408 C9orf66Q5T8R8 295 aa2.72□□□□□ -1.97
RFC4-211ENST00000460408 BNIPLQ7Z465 357 aa2.72□□□□□ -1.97
RFC4-211ENST00000460408 ADGRD2Q7Z7M1 963 aa2.72□□□□□ -1.97
RFC4-211ENST00000460408 SLC47A2Q86VL8 602 aa2.72□□□□□ -1.97
RFC4-211ENST00000460408 CCDC71Q8IV32 467 aaPredicted RBP2.72□□□□□ -1.97
RFC4-211ENST00000460408 MRPL43Q8N983 215 aaKnown RBP2.72□□□□□ -1.97
RFC4-211ENST00000460408 ZNF485Q8NCK3 441 aa2.72□□□□□ -1.97
RFC4-211ENST00000460408 CCNYQ8ND76 341 aa2.72□□□□□ -1.97
RFC4-211ENST00000460408 NEK11Q8NG66 645 aa2.72□□□□□ -1.97
RFC4-211ENST00000460408 NTNG2Q96CW9 530 aa2.72□□□□□ -1.97
RFC4-211ENST00000460408 XPO4Q9C0E2 1151 aaKnown RBP2.72□□□□□ -1.97
RFC4-211ENST00000460408 ABCG4Q9H172 646 aa2.72□□□□□ -1.97
RFC4-211ENST00000460408 ABCG8Q9H221 673 aa2.72□□□□□ -1.97
RFC4-211ENST00000460408 TNMDQ9H2S6 317 aa2.72□□□□□ -1.97
RFC4-211ENST00000460408 LIME1Q9H400 295 aa2.72□□□□□ -1.97
RFC4-211ENST00000460408 PCNX3Q9H6A9 2034 aa2.72□□□□□ -1.97
RFC4-211ENST00000460408 NT5DC2Q9H857 520 aa2.72□□□□□ -1.97
RFC4-211ENST00000460408 ZNF446Q9NWS9 450 aa2.72□□□□□ -1.97
RFC4-211ENST00000460408 GTSE1Q9NYZ3 720 aa2.72□□□□□ -1.97
RFC4-211ENST00000460408 RARRES3Q9UL19 164 aa2.72□□□□□ -1.97
RFC4-211ENST00000460408 ZNF346Q9UL40 294 aaKnown RBP2.72□□□□□ -1.97
RFC4-211ENST00000460408 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP2.72□□□□□ -1.97
RFC4-211ENST00000460408 KLHDC2Q9Y2U9 406 aa2.72□□□□□ -1.97
RFC4-211ENST00000460408 ATG4BQ9Y4P1 393 aa2.72□□□□□ -1.97
RFC4-211ENST00000460408 MROH2AA6NES4 1674 aa2.72□□□□□ -1.97
RFC4-211ENST00000460408 ZMYM6O95789 1325 aa2.71□□□□□ -1.98
RFC4-211ENST00000460408 FAM205AQ6ZU69 1335 aa2.71□□□□□ -1.98
RFC4-211ENST00000460408 CACNA1FO60840 1977 aa2.71□□□□□ -1.98
RFC4-211ENST00000460408 PDHXO00330 501 aa2.71□□□□□ -1.98
RFC4-211ENST00000460408 SH2D1BO14796 132 aa2.71□□□□□ -1.98
RFC4-211ENST00000460408 TXNL1O43396 289 aa2.71□□□□□ -1.98
RFC4-211ENST00000460408 HSF2BPO75031 334 aa2.71□□□□□ -1.98
RFC4-211ENST00000460408 SYNGR4O95473 234 aa2.71□□□□□ -1.98
RFC4-211ENST00000460408 PDGFBP01127 241 aaPredicted RBP2.71□□□□□ -1.98
RFC4-211ENST00000460408 IGHV3-13P01766 116 aa2.71□□□□□ -1.98
RFC4-211ENST00000460408 IGHG3P01860 377 aa2.71□□□□□ -1.98
RFC4-211ENST00000460408 APRTP07741 180 aa2.71□□□□□ -1.98
RFC4-211ENST00000460408 OR9G9P0C7N8 305 aa2.71□□□□□ -1.98
RFC4-211ENST00000460408 PTPN4P29074 926 aa2.71□□□□□ -1.98
RFC4-211ENST00000460408 PPP2R1AP30153 589 aa2.71□□□□□ -1.98
RFC4-211ENST00000460408 TRIM23P36406 574 aa2.71□□□□□ -1.98
RFC4-211ENST00000460408 ACADSBP45954 432 aa2.71□□□□□ -1.98
RFC4-211ENST00000460408 RIDAP52758 137 aaKnown RBP2.71□□□□□ -1.98
RFC4-211ENST00000460408 RPS4XP62701 263 aaKnown RBP2.71□□□□□ -1.98
RFC4-211ENST00000460408 CDKL1Q00532 357 aa2.71□□□□□ -1.98
RFC4-211ENST00000460408 WASHC5Q12768 1159 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms