RNA–Protein interactions for RNA: ENST00000460035.1

CCDC12-204, Transcript of coiled-coil domain containing 12, humanhuman

TSL 2

Gene CCDC12, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-204ENST00000460035 EFNA1P20827 205 aaPredicted RBP10.09□□□□□ -0.79
CCDC12-204ENST00000460035 MANFP55145 182 aaKnown RBP10.09□□□□□ -0.79
CCDC12-204ENST00000460035 MLF1P58340 268 aa10.09□□□□□ -0.79
CCDC12-204ENST00000460035 RNF4P78317 190 aa10.09□□□□□ -0.79
CCDC12-204ENST00000460035 MRPS35P82673 323 aaKnown RBP10.09□□□□□ -0.79
CCDC12-204ENST00000460035 MGAT2Q10469 447 aa10.09□□□□□ -0.79
CCDC12-204ENST00000460035 MAP4K2Q12851 820 aa10.09□□□□□ -0.79
CCDC12-204ENST00000460035 SF3A3Q12874 501 aaKnown RBP eCLIP10.09□□□□□ -0.79
CCDC12-204ENST00000460035 NFATC3Q12968 1075 aa10.09□□□□□ -0.79
CCDC12-204ENST00000460035 MFAP5Q13361 173 aa10.09□□□□□ -0.79
CCDC12-204ENST00000460035 EXOSC7Q15024 291 aaKnown RBP10.09□□□□□ -0.79
CCDC12-204ENST00000460035 PRICKLE4Q2TBC4 344 aa10.09□□□□□ -0.79
CCDC12-204ENST00000460035 LSM12Q3MHD2 195 aaKnown RBP10.09□□□□□ -0.79
CCDC12-204ENST00000460035 TRMT12Q53H54 448 aaKnown RBP10.09□□□□□ -0.79
CCDC12-204ENST00000460035 ZNF385BQ569K4 471 aa10.09□□□□□ -0.79
CCDC12-204ENST00000460035 HLA-DQA1Q5Y7H0 255 aa10.09□□□□□ -0.79
CCDC12-204ENST00000460035 TMEM198Q66K66 360 aa10.09□□□□□ -0.79
CCDC12-204ENST00000460035 SLC29A4Q7RTT9 530 aa10.09□□□□□ -0.79
CCDC12-204ENST00000460035 ZNF551Q7Z340 670 aaPredicted RBP10.09□□□□□ -0.79
CCDC12-204ENST00000460035 PTRH1Q86Y79 214 aaKnown RBP10.09□□□□□ -0.79
CCDC12-204ENST00000460035 HPS6Q86YV9 775 aa10.09□□□□□ -0.79
CCDC12-204ENST00000460035 LGI4Q8N135 537 aa10.09□□□□□ -0.79
CCDC12-204ENST00000460035 ARMC10Q8N2F6 343 aa10.09□□□□□ -0.79
CCDC12-204ENST00000460035 VWA5B2Q8N398 1253 aa10.09□□□□□ -0.79
CCDC12-204ENST00000460035 TEX19Q8NA77 164 aa10.09□□□□□ -0.79
CCDC12-204ENST00000460035 ZNF675Q8TD23 568 aa10.09□□□□□ -0.79
CCDC12-204ENST00000460035 MAGED4Q96JG8 741 aa10.09□□□□□ -0.79
CCDC12-204ENST00000460035 MARK4Q96L34 752 aa10.09□□□□□ -0.79
CCDC12-204ENST00000460035 RILPQ96NA2 401 aa10.09□□□□□ -0.79
CCDC12-204ENST00000460035 GAL3ST4Q96RP7 486 aa10.09□□□□□ -0.79
CCDC12-204ENST00000460035 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.09□□□□□ -0.79
CCDC12-204ENST00000460035 OR10A5Q9H207 317 aa10.09□□□□□ -0.79
CCDC12-204ENST00000460035 GLIPR2Q9H4G4 154 aa10.09□□□□□ -0.79
CCDC12-204ENST00000460035 TCF7L2Q9NQB0 619 aa10.09□□□□□ -0.79
CCDC12-204ENST00000460035 ATAD3AQ9NVI7 634 aa10.09□□□□□ -0.79
CCDC12-204ENST00000460035 MAT2BQ9NZL9 334 aa10.09□□□□□ -0.79
CCDC12-204ENST00000460035 MAPRE3Q9UPY8 281 aa10.09□□□□□ -0.79
CCDC12-204ENST00000460035 A0A0G2JND7 137 aa10.08□□□□□ -0.8
CCDC12-204ENST00000460035 A0A1W2PRB8 838 aa10.08□□□□□ -0.8
CCDC12-204ENST00000460035 E9PBE3 544 aa10.08□□□□□ -0.8
CCDC12-204ENST00000460035 FCHO1O14526 889 aa10.08□□□□□ -0.8
CCDC12-204ENST00000460035 CFLARO15519 480 aa10.08□□□□□ -0.8
CCDC12-204ENST00000460035 WDPCPO95876 746 aa10.08□□□□□ -0.8
CCDC12-204ENST00000460035 IFI6P09912 130 aa10.08□□□□□ -0.8
CCDC12-204ENST00000460035 TROVE2P10155 538 aaKnown RBP eCLIP10.08□□□□□ -0.8
CCDC12-204ENST00000460035 GPC1P35052 558 aa10.08□□□□□ -0.8
CCDC12-204ENST00000460035 GYS2P54840 703 aa10.08□□□□□ -0.8
CCDC12-204ENST00000460035 SLC37A1P57057 533 aa10.08□□□□□ -0.8
CCDC12-204ENST00000460035 UFM1P61960 85 aa10.08□□□□□ -0.8
CCDC12-204ENST00000460035 OC90Q02509 493 aaPredicted RBP10.08□□□□□ -0.8
CCDC12-204ENST00000460035 FUT7Q11130 342 aa10.08□□□□□ -0.8
CCDC12-204ENST00000460035 HSPB3Q12988 150 aa10.08□□□□□ -0.8
CCDC12-204ENST00000460035 SOWAHCQ53LP3 525 aaPredicted RBP10.08□□□□□ -0.8
CCDC12-204ENST00000460035 ZNF628Q5EBL2 1059 aa10.08□□□□□ -0.8
CCDC12-204ENST00000460035 COLEC12Q5KU26 742 aa10.08□□□□□ -0.8
CCDC12-204ENST00000460035 IGFL2Q6UWQ7 119 aa10.08□□□□□ -0.8
CCDC12-204ENST00000460035 IGFL3Q6UXB1 125 aa10.08□□□□□ -0.8
CCDC12-204ENST00000460035 C16orf47Q6ZP98 133 aaPredicted RBP10.08□□□□□ -0.8
CCDC12-204ENST00000460035 RIMKLAQ8IXN7 391 aa10.08□□□□□ -0.8
CCDC12-204ENST00000460035 BEST3Q8N1M1 668 aa10.08□□□□□ -0.8
CCDC12-204ENST00000460035 TMEM156Q8N614 296 aa10.08□□□□□ -0.8
CCDC12-204ENST00000460035 CATSPER1Q8NEC5 780 aa10.08□□□□□ -0.8
CCDC12-204ENST00000460035 OR7G1Q8NGA0 311 aa10.08□□□□□ -0.8
CCDC12-204ENST00000460035 OR52R1Q8NGF1 315 aa10.08□□□□□ -0.8
CCDC12-204ENST00000460035 OR8K3Q8NH51 312 aa10.08□□□□□ -0.8
CCDC12-204ENST00000460035 RFWD2Q8NHY2 731 aa10.08□□□□□ -0.8
CCDC12-204ENST00000460035 ZFP28Q8NHY6 868 aa10.08□□□□□ -0.8
CCDC12-204ENST00000460035 SUN3Q8TAQ9 357 aa10.08□□□□□ -0.8
CCDC12-204ENST00000460035 CTHRC1Q96CG8 243 aa10.08□□□□□ -0.8
CCDC12-204ENST00000460035 COQ8BQ96D53 544 aa10.08□□□□□ -0.8
CCDC12-204ENST00000460035 ERP27Q96DN0 273 aa10.08□□□□□ -0.8
CCDC12-204ENST00000460035 ZBED6CLQ96FA7 236 aaPredicted RBP10.08□□□□□ -0.8
CCDC12-204ENST00000460035 AMDHD1Q96NU7 426 aa10.08□□□□□ -0.8
CCDC12-204ENST00000460035 BBC3Q96PG8 261 aaPredicted RBP10.08□□□□□ -0.8
CCDC12-204ENST00000460035 ZBTB18Q99592 522 aa10.08□□□□□ -0.8
CCDC12-204ENST00000460035 NPAS2Q99743 824 aa10.08□□□□□ -0.8
CCDC12-204ENST00000460035 EBF4Q9BQW3 602 aa10.08□□□□□ -0.8
CCDC12-204ENST00000460035 SIKE1Q9BRV8 207 aa10.08□□□□□ -0.8
CCDC12-204ENST00000460035 CCDC28BQ9BUN5 200 aa10.08□□□□□ -0.8
CCDC12-204ENST00000460035 DUSP26Q9BV47 211 aa10.08□□□□□ -0.8
CCDC12-204ENST00000460035 ANKRA2Q9H9E1 313 aa10.08□□□□□ -0.8
CCDC12-204ENST00000460035 FGFR1OP2Q9NVK5 253 aa10.08□□□□□ -0.8
CCDC12-204ENST00000460035 AIG1Q9NVV5 245 aa10.08□□□□□ -0.8
CCDC12-204ENST00000460035 ANKRD10Q9NXR5 420 aa10.08□□□□□ -0.8
CCDC12-204ENST00000460035 MYOTQ9UBF9 498 aa10.08□□□□□ -0.8
CCDC12-204ENST00000460035 PCNX3Q9H6A9 2034 aa10.07□□□□□ -0.8
CCDC12-204ENST00000460035 BOD1L1Q8NFC6 3051 aa10.07□□□□□ -0.8
CCDC12-204ENST00000460035 C2orf92A0A1B0GVN3 265 aa10.07□□□□□ -0.8
CCDC12-204ENST00000460035 OR6C76A6NM76 312 aa10.07□□□□□ -0.8
CCDC12-204ENST00000460035 CDK2AP1O14519 115 aa10.07□□□□□ -0.8
CCDC12-204ENST00000460035 ANKRD28O15084 1053 aa10.07□□□□□ -0.8
CCDC12-204ENST00000460035 ITGA10O75578 1167 aa10.07□□□□□ -0.8
CCDC12-204ENST00000460035 BCAS2O75934 225 aaPredicted RBP10.07□□□□□ -0.8
CCDC12-204ENST00000460035 OR2J2O76002 312 aa10.07□□□□□ -0.8
CCDC12-204ENST00000460035 SLITRK5O94991 958 aa10.07□□□□□ -0.8
CCDC12-204ENST00000460035 CLPSP04118 112 aa10.07□□□□□ -0.8
CCDC12-204ENST00000460035 ABCB1P08183 1280 aaPredicted RBP10.07□□□□□ -0.8
CCDC12-204ENST00000460035 IDO1P14902 403 aa10.07□□□□□ -0.8
CCDC12-204ENST00000460035 S1PR1P21453 382 aa10.07□□□□□ -0.8
CCDC12-204ENST00000460035 S100A3P33764 101 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms