RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 MAU2Q9Y6X3 613 aa22.89■■□□□ 1.25
U2AF1-204ENST00000459639 TMEM247A6NEH6 219 aa22.88■■□□□ 1.25
U2AF1-204ENST00000459639 C5orf58C9J3I9 102 aa22.88■■□□□ 1.25
U2AF1-204ENST00000459639 ASNA1O43681 348 aa22.88■■□□□ 1.25
U2AF1-204ENST00000459639 OR12D1P0DN82 309 aa22.88■■□□□ 1.25
U2AF1-204ENST00000459639 NT5EP21589 574 aa22.88■■□□□ 1.25
U2AF1-204ENST00000459639 AQP1P29972 269 aa22.88■■□□□ 1.25
U2AF1-204ENST00000459639 CRYBA2P53672 197 aa22.88■■□□□ 1.25
U2AF1-204ENST00000459639 PRICKLE4Q2TBC4 344 aa22.88■■□□□ 1.25
U2AF1-204ENST00000459639 CRB2Q5IJ48 1285 aa22.88■■□□□ 1.25
U2AF1-204ENST00000459639 FHL5Q5TD97 284 aa22.88■■□□□ 1.25
U2AF1-204ENST00000459639 PRAMEF17Q5VTA0 474 aa22.88■■□□□ 1.25
U2AF1-204ENST00000459639 FAM111BQ6SJ93 734 aa22.88■■□□□ 1.25
U2AF1-204ENST00000459639 PATL1Q86TB9 770 aaKnown RBP22.88■■□□□ 1.25
U2AF1-204ENST00000459639 ANKFN1Q8N957 763 aa22.88■■□□□ 1.25
U2AF1-204ENST00000459639 SLC38A5Q8WUX1 472 aa22.88■■□□□ 1.25
U2AF1-204ENST00000459639 CENPNQ96H22 339 aaPredicted RBP22.88■■□□□ 1.25
U2AF1-204ENST00000459639 SEMA6AQ9H2E6 1030 aa22.88■■□□□ 1.25
U2AF1-204ENST00000459639 C19orf53Q9UNZ5 99 aaPredicted RBP22.88■■□□□ 1.25
U2AF1-204ENST00000459639 C15orf41Q9Y2V0 281 aa22.88■■□□□ 1.25
U2AF1-204ENST00000459639 PLOD3O60568 738 aa22.87■■□□□ 1.25
U2AF1-204ENST00000459639 BCHEP06276 602 aa22.87■■□□□ 1.25
U2AF1-204ENST00000459639 SOX18P35713 384 aa22.87■■□□□ 1.25
U2AF1-204ENST00000459639 LRRC36Q1X8D7 754 aa22.87■■□□□ 1.25
U2AF1-204ENST00000459639 GRAMD1BQ3KR37 738 aa22.87■■□□□ 1.25
U2AF1-204ENST00000459639 CYBRD1Q53TN4 286 aa22.87■■□□□ 1.25
U2AF1-204ENST00000459639 PHF19Q5T6S3 580 aa22.87■■□□□ 1.25
U2AF1-204ENST00000459639 ST13P4Q8IZP2 240 aaPredicted RBP22.87■■□□□ 1.25
U2AF1-204ENST00000459639 SUMF1Q8NBK3 374 aa22.87■■□□□ 1.25
U2AF1-204ENST00000459639 OR5D16Q8NGK9 328 aa22.87■■□□□ 1.25
U2AF1-204ENST00000459639 TMEM19Q96HH6 336 aa22.87■■□□□ 1.25
U2AF1-204ENST00000459639 OR6C1Q96RD1 312 aa22.87■■□□□ 1.25
U2AF1-204ENST00000459639 ACTRT3Q9BYD9 372 aa22.87■■□□□ 1.25
U2AF1-204ENST00000459639 ZNF304Q9HCX3 659 aa22.87■■□□□ 1.25
U2AF1-204ENST00000459639 MAT2BQ9NZL9 334 aa22.87■■□□□ 1.25
U2AF1-204ENST00000459639 RARRES3Q9UL19 164 aa22.87■■□□□ 1.25
U2AF1-204ENST00000459639 CDX4O14627 284 aaPredicted RBP22.87■■□□□ 1.25
U2AF1-204ENST00000459639 OR10H2O60403 315 aa22.87■■□□□ 1.25
U2AF1-204ENST00000459639 LDLRP01130 860 aa22.87■■□□□ 1.25
U2AF1-204ENST00000459639 IFNA14P01570 189 aa22.87■■□□□ 1.25
U2AF1-204ENST00000459639 FBLP22087 321 aaKnown RBP22.87■■□□□ 1.25
U2AF1-204ENST00000459639 OR1D4P47884 311 aa22.87■■□□□ 1.25
U2AF1-204ENST00000459639 CLCN2P51788 898 aa22.87■■□□□ 1.25
U2AF1-204ENST00000459639 STX4Q12846 297 aa22.87■■□□□ 1.25
U2AF1-204ENST00000459639 SF3A2Q15428 464 aaKnown RBP22.87■■□□□ 1.25
U2AF1-204ENST00000459639 CTHRC1Q96CG8 243 aa22.87■■□□□ 1.25
U2AF1-204ENST00000459639 ANKRA2Q9H9E1 313 aa22.87■■□□□ 1.25
U2AF1-204ENST00000459639 DTNAQ9Y4J8 743 aa22.87■■□□□ 1.25
U2AF1-204ENST00000459639 FER1L5A0AVI2 2057 aa22.86■■□□□ 1.25
U2AF1-204ENST00000459639 TGFBR3LH3BV60 316 aa22.86■■□□□ 1.25
U2AF1-204ENST00000459639 SUV39H1O43463 412 aa22.86■■□□□ 1.25
U2AF1-204ENST00000459639 DEAF1O75398 565 aaPredicted RBP22.86■■□□□ 1.25
U2AF1-204ENST00000459639 CDC123O75794 336 aaPredicted RBP22.86■■□□□ 1.25
U2AF1-204ENST00000459639 MT-ND1P03886 318 aa22.86■■□□□ 1.25
U2AF1-204ENST00000459639 SEMG1P04279 462 aa22.86■■□□□ 1.25
U2AF1-204ENST00000459639 MAGEA2P43356 314 aa22.86■■□□□ 1.25
U2AF1-204ENST00000459639 MAN2A2P49641 1150 aa22.86■■□□□ 1.25
U2AF1-204ENST00000459639 MGAT2Q10469 447 aa22.86■■□□□ 1.25
U2AF1-204ENST00000459639 BIKQ13323 160 aa22.86■■□□□ 1.25
U2AF1-204ENST00000459639 LARP7Q4G0J3 582 aaKnown RBP eCLIP22.86■■□□□ 1.25
U2AF1-204ENST00000459639 RHBDD2Q6NTF9 364 aa22.86■■□□□ 1.25
U2AF1-204ENST00000459639 MFSD12Q6NUT3 480 aa22.86■■□□□ 1.25
U2AF1-204ENST00000459639 IZUMO2Q6UXV1 221 aa22.86■■□□□ 1.25
U2AF1-204ENST00000459639 KBTBD2Q8IY47 623 aa22.86■■□□□ 1.25
U2AF1-204ENST00000459639 XAGE5Q8WWM1 108 aa22.86■■□□□ 1.25
U2AF1-204ENST00000459639 C16orf58Q96GQ5 468 aa22.86■■□□□ 1.25
U2AF1-204ENST00000459639 HSH2DQ96JZ2 352 aa22.86■■□□□ 1.25
U2AF1-204ENST00000459639 OR7D2Q96RA2 312 aa22.86■■□□□ 1.25
U2AF1-204ENST00000459639 ZNF184Q99676 751 aaPredicted RBP22.86■■□□□ 1.25
U2AF1-204ENST00000459639 LANCL2Q9NS86 450 aa22.86■■□□□ 1.25
U2AF1-204ENST00000459639 HCN4Q9Y3Q4 1203 aa22.86■■□□□ 1.25
U2AF1-204ENST00000459639 MMACHCQ9Y4U1 282 aa22.86■■□□□ 1.25
U2AF1-204ENST00000459639 LRRC42Q9Y546 428 aa22.86■■□□□ 1.25
U2AF1-204ENST00000459639 CLDN16Q9Y5I7 305 aa22.86■■□□□ 1.25
U2AF1-204ENST00000459639 COL27A1Q8IZC6 1860 aaPredicted RBP22.86■■□□□ 1.25
U2AF1-204ENST00000459639 MYOCOSA0A1B0GUC4 107 aa22.85■■□□□ 1.25
U2AF1-204ENST00000459639 FAM149AA5PLN7 773 aa22.85■■□□□ 1.25
U2AF1-204ENST00000459639 PDE9AO76083 593 aa22.85■■□□□ 1.25
U2AF1-204ENST00000459639 CD59P13987 128 aa22.85■■□□□ 1.25
U2AF1-204ENST00000459639 ZFP36L1Q07352 338 aaKnown RBP22.85■■□□□ 1.25
U2AF1-204ENST00000459639 ERV3-1Q14264 604 aa22.85■■□□□ 1.25
U2AF1-204ENST00000459639 GNA13Q14344 377 aa22.85■■□□□ 1.25
U2AF1-204ENST00000459639 MAPK11Q15759 364 aa22.85■■□□□ 1.25
U2AF1-204ENST00000459639 TRMT12Q53H54 448 aaKnown RBP22.85■■□□□ 1.25
U2AF1-204ENST00000459639 CDC73Q6P1J9 531 aa22.85■■□□□ 1.25
U2AF1-204ENST00000459639 ZDHHC19Q8WVZ1 309 aaPredicted RBP22.85■■□□□ 1.25
U2AF1-204ENST00000459639 DNAJC9Q8WXX5 260 aa22.85■■□□□ 1.25
U2AF1-204ENST00000459639 EME1Q96AY2 570 aa22.85■■□□□ 1.25
U2AF1-204ENST00000459639 TAMM41Q96BW9 452 aa22.85■■□□□ 1.25
U2AF1-204ENST00000459639 PELOQ9BRX2 385 aaKnown RBP22.85■■□□□ 1.25
U2AF1-204ENST00000459639 YIPF4Q9BSR8 244 aa22.85■■□□□ 1.25
U2AF1-204ENST00000459639 DOHHQ9BU89 302 aa22.85■■□□□ 1.25
U2AF1-204ENST00000459639 BDH2Q9BUT1 245 aa22.85■■□□□ 1.25
U2AF1-204ENST00000459639 ALOXE3Q9BYJ1 711 aa22.85■■□□□ 1.25
U2AF1-204ENST00000459639 EQTNQ9NQ60 294 aa22.85■■□□□ 1.25
U2AF1-204ENST00000459639 CLOCKO15516 846 aa22.84■■□□□ 1.25
U2AF1-204ENST00000459639 SLC28A2O43868 658 aa22.84■■□□□ 1.25
U2AF1-204ENST00000459639 SELENOWP63302 87 aa22.84■■□□□ 1.25
U2AF1-204ENST00000459639 BTG2P78543 158 aa22.84■■□□□ 1.25
U2AF1-204ENST00000459639 MAP4K2Q12851 820 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms