RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 FBXO43Q4G163 708 aa15.72■□□□□ 0.11
CCDC43-202ENST00000457422 TMEM236Q5W0B7 351 aa15.72■□□□□ 0.11
CCDC43-202ENST00000457422 COMTD1Q86VU5 262 aa15.72■□□□□ 0.11
CCDC43-202ENST00000457422 TRIM69Q86WT6 500 aa15.72■□□□□ 0.11
CCDC43-202ENST00000457422 CCDC116Q8IYX3 515 aa15.72■□□□□ 0.11
CCDC43-202ENST00000457422 FAM46DQ8NEK8 389 aa15.72■□□□□ 0.11
CCDC43-202ENST00000457422 GAL3ST3Q96A11 431 aa15.72■□□□□ 0.11
CCDC43-202ENST00000457422 LGALS12Q96DT0 336 aa15.72■□□□□ 0.11
CCDC43-202ENST00000457422 YIPF4Q9BSR8 244 aa15.72■□□□□ 0.11
CCDC43-202ENST00000457422 ZNF624Q9P2J8 865 aaPredicted RBP15.72■□□□□ 0.11
CCDC43-202ENST00000457422 GOLGA4Q13439 2230 aaKnown RBP15.72■□□□□ 0.11
CCDC43-202ENST00000457422 A0A1W2PRQ8 180 aa15.72■□□□□ 0.11
CCDC43-202ENST00000457422 EFCAB10A6NFE3 127 aa15.72■□□□□ 0.11
CCDC43-202ENST00000457422 CLDN25C9JDP6 229 aa15.72■□□□□ 0.11
CCDC43-202ENST00000457422 BTN3A3O00478 584 aa15.72■□□□□ 0.11
CCDC43-202ENST00000457422 HMGN2P05204 90 aaKnown RBP15.72■□□□□ 0.11
CCDC43-202ENST00000457422 ASGR2P07307 311 aa15.72■□□□□ 0.11
CCDC43-202ENST00000457422 CHRM4P08173 479 aa15.72■□□□□ 0.11
CCDC43-202ENST00000457422 C8orf89P0DMQ9 161 aa15.72■□□□□ 0.11
CCDC43-202ENST00000457422 CNR2P34972 360 aa15.72■□□□□ 0.11
CCDC43-202ENST00000457422 DGKEP52429 567 aa15.72■□□□□ 0.11
CCDC43-202ENST00000457422 UGT2B15P54855 530 aa15.72■□□□□ 0.11
CCDC43-202ENST00000457422 NCS1P62166 190 aa15.72■□□□□ 0.11
CCDC43-202ENST00000457422 PRR5P85299 388 aa15.72■□□□□ 0.11
CCDC43-202ENST00000457422 TMED1Q13445 227 aa15.72■□□□□ 0.11
CCDC43-202ENST00000457422 ZNF846Q147U1 533 aa15.72■□□□□ 0.11
CCDC43-202ENST00000457422 TIGD6Q17RP2 521 aa15.72■□□□□ 0.11
CCDC43-202ENST00000457422 TJAP1Q5JTD0 557 aa15.72■□□□□ 0.11
CCDC43-202ENST00000457422 PGBD2Q6P3X8 592 aa15.72■□□□□ 0.11
CCDC43-202ENST00000457422 C16orf87Q6PH81 154 aa15.72■□□□□ 0.11
CCDC43-202ENST00000457422 KIAA1324Q6UXG2 1013 aaKnown RBP15.72■□□□□ 0.11
CCDC43-202ENST00000457422 VN1R4Q7Z5H5 301 aa15.72■□□□□ 0.11
CCDC43-202ENST00000457422 STX19Q8N4C7 294 aa15.72■□□□□ 0.11
CCDC43-202ENST00000457422 CCL4L1Q8NHW4 92 aa15.72■□□□□ 0.11
CCDC43-202ENST00000457422 C9orf43Q8TAL5 461 aaPredicted RBP15.72■□□□□ 0.11
CCDC43-202ENST00000457422 NT5CQ8TCD5 201 aa15.72■□□□□ 0.11
CCDC43-202ENST00000457422 TSACCQ96A04 125 aaPredicted RBP15.72■□□□□ 0.11
CCDC43-202ENST00000457422 SLC22A18Q96BI1 424 aa15.72■□□□□ 0.11
CCDC43-202ENST00000457422 ZNF681Q96N22 645 aa15.72■□□□□ 0.11
CCDC43-202ENST00000457422 AKIP1Q9NQ31 210 aa15.72■□□□□ 0.11
CCDC43-202ENST00000457422 GIMAP4Q9NUV9 329 aa15.72■□□□□ 0.11
CCDC43-202ENST00000457422 MS4A12Q9NXJ0 267 aa15.72■□□□□ 0.11
CCDC43-202ENST00000457422 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.72■□□□□ 0.11
CCDC43-202ENST00000457422 SLC9A8Q9Y2E8 581 aa15.72■□□□□ 0.11
CCDC43-202ENST00000457422 A0A0G2JPF8 293 aa15.71■□□□□ 0.11
CCDC43-202ENST00000457422 HNRNPCL2B2RXH8 293 aa15.71■□□□□ 0.11
CCDC43-202ENST00000457422 HNRNPCL3B7ZW38 293 aa15.71■□□□□ 0.11
CCDC43-202ENST00000457422 J3QRK9 145 aa15.71■□□□□ 0.11
CCDC43-202ENST00000457422 CASC3O15234 703 aaKnown RBP15.71■□□□□ 0.11
CCDC43-202ENST00000457422 EMC8O43402 210 aa15.71■□□□□ 0.11
CCDC43-202ENST00000457422 OR10H3O60404 316 aa15.71■□□□□ 0.11
CCDC43-202ENST00000457422 UGT2B17O75795 530 aa15.71■□□□□ 0.11
CCDC43-202ENST00000457422 LGI1O95970 557 aa15.71■□□□□ 0.11
CCDC43-202ENST00000457422 STSP08842 583 aa15.71■□□□□ 0.11
CCDC43-202ENST00000457422 HNRNPCL4P0DMR1 293 aa15.71■□□□□ 0.11
CCDC43-202ENST00000457422 ADORA3P0DMS8 318 aa15.71■□□□□ 0.11
CCDC43-202ENST00000457422 MPIP34949 423 aa15.71■□□□□ 0.11
CCDC43-202ENST00000457422 FEN1P39748 380 aaKnown RBP15.71■□□□□ 0.11
CCDC43-202ENST00000457422 SNRPGP62308 76 aaKnown RBP15.71■□□□□ 0.11
CCDC43-202ENST00000457422 ST3GAL4Q11206 333 aa15.71■□□□□ 0.11
CCDC43-202ENST00000457422 SFSWAPQ12872 951 aaKnown RBP15.71■□□□□ 0.11
CCDC43-202ENST00000457422 LASP1Q14847 261 aaKnown RBP15.71■□□□□ 0.11
CCDC43-202ENST00000457422 SLX4IPQ5VYV7 408 aa15.71■□□□□ 0.11
CCDC43-202ENST00000457422 TMEM107Q6UX40 140 aa15.71■□□□□ 0.11
CCDC43-202ENST00000457422 PTCHD4Q6ZW05 846 aa15.71■□□□□ 0.11
CCDC43-202ENST00000457422 HMGN2P46Q86SG4 172 aa15.71■□□□□ 0.11
CCDC43-202ENST00000457422 B3GNT7Q8NFL0 401 aa15.71■□□□□ 0.11
CCDC43-202ENST00000457422 SLC7A13Q8TCU3 470 aa15.71■□□□□ 0.11
CCDC43-202ENST00000457422 ZNF675Q8TD23 568 aa15.71■□□□□ 0.11
CCDC43-202ENST00000457422 CRELD1Q96HD1 420 aa15.71■□□□□ 0.11
CCDC43-202ENST00000457422 MRGPRX1Q96LB2 322 aa15.71■□□□□ 0.11
CCDC43-202ENST00000457422 BMFQ96LC9 184 aa15.71■□□□□ 0.11
CCDC43-202ENST00000457422 FCRL4Q96PJ5 515 aa15.71■□□□□ 0.11
CCDC43-202ENST00000457422 CDCA4Q9BXL8 241 aa15.71■□□□□ 0.11
CCDC43-202ENST00000457422 WDR12Q9GZL7 423 aaKnown RBP15.71■□□□□ 0.11
CCDC43-202ENST00000457422 HMG20AQ9NP66 347 aa15.71■□□□□ 0.11
CCDC43-202ENST00000457422 FBXO8Q9NRD0 319 aa15.71■□□□□ 0.11
CCDC43-202ENST00000457422 TBCCD1Q9NVR7 557 aa15.71■□□□□ 0.11
CCDC43-202ENST00000457422 CLN6Q9NWW5 311 aa15.71■□□□□ 0.11
CCDC43-202ENST00000457422 A6NCN8 305 aa15.71■□□□□ 0.1
CCDC43-202ENST00000457422 M0R3H8 397 aa15.71■□□□□ 0.1
CCDC43-202ENST00000457422 TNFRSF10CO14798 259 aa15.71■□□□□ 0.1
CCDC43-202ENST00000457422 ASNA1O43681 348 aa15.71■□□□□ 0.1
CCDC43-202ENST00000457422 NARSO43776 548 aaKnown RBP15.71■□□□□ 0.1
CCDC43-202ENST00000457422 NADKO95544 446 aaPredicted RBP15.71■□□□□ 0.1
CCDC43-202ENST00000457422 EPPINO95925 133 aa15.71■□□□□ 0.1
CCDC43-202ENST00000457422 ACADMP11310 421 aa15.71■□□□□ 0.1
CCDC43-202ENST00000457422 PIPP12273 146 aaPredicted RBP15.71■□□□□ 0.1
CCDC43-202ENST00000457422 POU1F1P28069 291 aa15.71■□□□□ 0.1
CCDC43-202ENST00000457422 SLC15A1P46059 708 aa15.71■□□□□ 0.1
CCDC43-202ENST00000457422 MRPS21P82921 87 aaKnown RBP15.71■□□□□ 0.1
CCDC43-202ENST00000457422 KIR2DS3Q14952 304 aa15.71■□□□□ 0.1
CCDC43-202ENST00000457422 LEXMQ3ZCV2 418 aa15.71■□□□□ 0.1
CCDC43-202ENST00000457422 TMEM31Q5JXX7 168 aa15.71■□□□□ 0.1
CCDC43-202ENST00000457422 CD300LDQ6UXZ3 194 aa15.71■□□□□ 0.1
CCDC43-202ENST00000457422 SLC46A3Q7Z3Q1 461 aa15.71■□□□□ 0.1
CCDC43-202ENST00000457422 NRROSQ86YC3 692 aa15.71■□□□□ 0.1
CCDC43-202ENST00000457422 LINC00471Q8N535 108 aa15.71■□□□□ 0.1
CCDC43-202ENST00000457422 FLVCR1-AS1Q8TAF5 88 aa15.71■□□□□ 0.1
CCDC43-202ENST00000457422 S100ZQ8WXG8 99 aa15.71■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms