RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 KIFC1Q9BW19 673 aa5.11□□□□□ -1.59
VPS41-209ENST00000457055 CNOT10Q9H9A5 744 aaKnown RBP5.11□□□□□ -1.59
VPS41-209ENST00000457055 ACTR5Q9H9F9 607 aaPredicted RBP5.11□□□□□ -1.59
VPS41-209ENST00000457055 BCO1Q9HAY6 547 aa5.11□□□□□ -1.59
VPS41-209ENST00000457055 CHST11Q9NPF2 352 aa5.11□□□□□ -1.59
VPS41-209ENST00000457055 DUSP22Q9NRW4 184 aa5.11□□□□□ -1.59
VPS41-209ENST00000457055 FAM207AQ9NSI2 230 aaPredicted RBP5.11□□□□□ -1.59
VPS41-209ENST00000457055 DPP3Q9NY33 737 aa5.11□□□□□ -1.59
VPS41-209ENST00000457055 OR6C3Q9NZP0 311 aa5.11□□□□□ -1.59
VPS41-209ENST00000457055 HCN3Q9P1Z3 774 aa5.11□□□□□ -1.59
VPS41-209ENST00000457055 SEMA5BQ9P283 1151 aa5.11□□□□□ -1.59
VPS41-209ENST00000457055 ERRFI1Q9UJM3 462 aaPredicted RBP5.11□□□□□ -1.59
VPS41-209ENST00000457055 ST3GAL5Q9UNP4 418 aa5.11□□□□□ -1.59
VPS41-209ENST00000457055 POFUT2Q9Y2G5 429 aa5.11□□□□□ -1.59
VPS41-209ENST00000457055 PRELID3BQ9Y3B1 194 aa5.11□□□□□ -1.59
VPS41-209ENST00000457055 WIF1Q9Y5W5 379 aa5.11□□□□□ -1.59
VPS41-209ENST00000457055 SLC22A7Q9Y694 548 aa5.11□□□□□ -1.59
VPS41-209ENST00000457055 MKI67P46013 3256 aaKnown RBP5.11□□□□□ -1.59
VPS41-209ENST00000457055 CEP290O15078 2479 aa5.11□□□□□ -1.59
VPS41-209ENST00000457055 A0A0A6YYK5 440 aaPredicted RBP5.1□□□□□ -1.59
VPS41-209ENST00000457055 A0A1B0GW15 77 aa5.1□□□□□ -1.59
VPS41-209ENST00000457055 GRID2IPA4D2P6 1211 aa5.1□□□□□ -1.59
VPS41-209ENST00000457055 NPIPB13A6NJU9 1138 aa5.1□□□□□ -1.59
VPS41-209ENST00000457055 MAGEB17A8MXT2 336 aa5.1□□□□□ -1.59
VPS41-209ENST00000457055 NPIPB4C9JG80 1138 aa5.1□□□□□ -1.59
VPS41-209ENST00000457055 H3BMM5 538 aa5.1□□□□□ -1.59
VPS41-209ENST00000457055 M0QZK8 103 aa5.1□□□□□ -1.59
VPS41-209ENST00000457055 QSOX1O00391 747 aa5.1□□□□□ -1.59
VPS41-209ENST00000457055 TXNDC9O14530 226 aa5.1□□□□□ -1.59
VPS41-209ENST00000457055 NRP1O14786 923 aa5.1□□□□□ -1.59
VPS41-209ENST00000457055 ARPC3O15145 178 aa5.1□□□□□ -1.59
VPS41-209ENST00000457055 TRIM24O15164 1050 aa5.1□□□□□ -1.59
VPS41-209ENST00000457055 RGS10O43665 173 aa5.1□□□□□ -1.59
VPS41-209ENST00000457055 SSX4O60224 188 aa5.1□□□□□ -1.59
VPS41-209ENST00000457055 GMDSO60547 372 aa5.1□□□□□ -1.59
VPS41-209ENST00000457055 FCMRO60667 390 aa5.1□□□□□ -1.59
VPS41-209ENST00000457055 MEGF6O75095 1541 aa5.1□□□□□ -1.59
VPS41-209ENST00000457055 NME6O75414 186 aaPredicted RBP5.1□□□□□ -1.59
VPS41-209ENST00000457055 PGK1P00558 417 aa5.1□□□□□ -1.59
VPS41-209ENST00000457055 CXCL10P02778 98 aa5.1□□□□□ -1.59
VPS41-209ENST00000457055 EBLN1P0CF75 366 aa5.1□□□□□ -1.59
VPS41-209ENST00000457055 DBTP11182 482 aaKnown RBP5.1□□□□□ -1.59
VPS41-209ENST00000457055 PSKH1P11801 424 aa5.1□□□□□ -1.59
VPS41-209ENST00000457055 NR2C1P13056 603 aa5.1□□□□□ -1.59
VPS41-209ENST00000457055 GYPEP15421 78 aa5.1□□□□□ -1.59
VPS41-209ENST00000457055 H2AFXP16104 143 aaPredicted RBP5.1□□□□□ -1.59
VPS41-209ENST00000457055 ZNF26P17031 533 aaPredicted RBP5.1□□□□□ -1.59
VPS41-209ENST00000457055 ITGA3P26006 1051 aa5.1□□□□□ -1.59
VPS41-209ENST00000457055 DDX6P26196 483 aaKnown RBP eCLIP5.1□□□□□ -1.59
VPS41-209ENST00000457055 IL1R2P27930 398 aa5.1□□□□□ -1.59
VPS41-209ENST00000457055 MAS1LP35410 378 aa5.1□□□□□ -1.59
VPS41-209ENST00000457055 P2RY2P41231 377 aa5.1□□□□□ -1.59
VPS41-209ENST00000457055 MMP13P45452 471 aa5.1□□□□□ -1.59
VPS41-209ENST00000457055 ARRB1P49407 418 aaPredicted RBP5.1□□□□□ -1.59
VPS41-209ENST00000457055 FLT3LGP49771 235 aa5.1□□□□□ -1.59
VPS41-209ENST00000457055 RGS4P49798 205 aa5.1□□□□□ -1.59
VPS41-209ENST00000457055 WNT3P56703 355 aa5.1□□□□□ -1.59
VPS41-209ENST00000457055 TIRAPP58753 221 aa5.1□□□□□ -1.59
VPS41-209ENST00000457055 HSF2Q03933 536 aa5.1□□□□□ -1.59
VPS41-209ENST00000457055 DSC1Q08554 894 aa5.1□□□□□ -1.59
VPS41-209ENST00000457055 MALLQ13021 153 aa5.1□□□□□ -1.59
VPS41-209ENST00000457055 ITPK1Q13572 414 aa5.1□□□□□ -1.59
VPS41-209ENST00000457055 RAB32Q13637 225 aa5.1□□□□□ -1.59
VPS41-209ENST00000457055 KIAA0100Q14667 2235 aaKnown RBP5.1□□□□□ -1.59
VPS41-209ENST00000457055 PTPRCAPQ14761 206 aa5.1□□□□□ -1.59
VPS41-209ENST00000457055 CHI3L2Q15782 390 aa5.1□□□□□ -1.59
VPS41-209ENST00000457055 PHKG1Q16816 387 aa5.1□□□□□ -1.59
VPS41-209ENST00000457055 C18orf21Q32NC0 220 aaPredicted RBP5.1□□□□□ -1.59
VPS41-209ENST00000457055 GALNTL6Q49A17 601 aa5.1□□□□□ -1.59
VPS41-209ENST00000457055 TIGD2Q4W5G0 525 aa5.1□□□□□ -1.59
VPS41-209ENST00000457055 MFSD14BQ5SR56 506 aa5.1□□□□□ -1.59
VPS41-209ENST00000457055 IRAK1BP1Q5VVH5 260 aa5.1□□□□□ -1.59
VPS41-209ENST00000457055 CST9Q5W186 159 aa5.1□□□□□ -1.59
VPS41-209ENST00000457055 ELP2Q6IA86 826 aa5.1□□□□□ -1.59
VPS41-209ENST00000457055 METTL7BQ6UX53 244 aa5.1□□□□□ -1.59
VPS41-209ENST00000457055 LRRN1Q6UXK5 716 aa5.1□□□□□ -1.59
VPS41-209ENST00000457055 UNQ6494/PRO21346Q6UXR6 183 aa5.1□□□□□ -1.59
VPS41-209ENST00000457055 USP43Q70EL4 1123 aa5.1□□□□□ -1.59
VPS41-209ENST00000457055 SSX9Q7RTT3 188 aa5.1□□□□□ -1.59
VPS41-209ENST00000457055 SLC46A3Q7Z3Q1 461 aa5.1□□□□□ -1.59
VPS41-209ENST00000457055 HDDC2Q7Z4H3 204 aa5.1□□□□□ -1.59
VPS41-209ENST00000457055 GRASPQ7Z6J2 395 aaPredicted RBP5.1□□□□□ -1.59
VPS41-209ENST00000457055 ANKRD46Q86W74 232 aa5.1□□□□□ -1.59
VPS41-209ENST00000457055 CCDC71Q8IV32 467 aaPredicted RBP5.1□□□□□ -1.59
VPS41-209ENST00000457055 RASGRP3Q8IV61 690 aa5.1□□□□□ -1.59
VPS41-209ENST00000457055 NOA1Q8NC60 698 aaKnown RBP5.1□□□□□ -1.59
VPS41-209ENST00000457055 KCNG3Q8TAE7 436 aa5.1□□□□□ -1.59
VPS41-209ENST00000457055 FNDC8Q8TC99 324 aa5.1□□□□□ -1.59
VPS41-209ENST00000457055 NEK7Q8TDX7 302 aa5.1□□□□□ -1.59
VPS41-209ENST00000457055 PALLDQ8WX93 1383 aa5.1□□□□□ -1.59
VPS41-209ENST00000457055 YIPF5Q969M3 257 aa5.1□□□□□ -1.59
VPS41-209ENST00000457055 PSMG2Q969U7 264 aa5.1□□□□□ -1.59
VPS41-209ENST00000457055 MARC2Q969Z3 335 aa5.1□□□□□ -1.59
VPS41-209ENST00000457055 KLHL29Q96CT2 875 aa5.1□□□□□ -1.59
VPS41-209ENST00000457055 SGTBQ96EQ0 304 aa5.1□□□□□ -1.59
VPS41-209ENST00000457055 CERS2Q96G23 380 aa5.1□□□□□ -1.59
VPS41-209ENST00000457055 BSCL2Q96G97 398 aaPredicted RBP5.1□□□□□ -1.59
VPS41-209ENST00000457055 HIST1H2AHQ96KK5 128 aa5.1□□□□□ -1.59
VPS41-209ENST00000457055 GLT1D1Q96MS3 346 aa5.1□□□□□ -1.59
VPS41-209ENST00000457055 MBOAT7Q96N66 472 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms