RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 NR2F6P10588 404 aa4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 FUT1P19526 365 aa4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 CELP19835 753 aa4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 ITGALP20701 1170 aa4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 IL12RB1P42701 662 aa4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 AKR1D1P51857 326 aa4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 DGCR2P98153 550 aa4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 SCN1BQ07699 218 aa4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 MICAQ29983 383 aa4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 SLC25A35Q3KQZ1 300 aa4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 SYT14P1Q58G82 188 aa4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 RNASE12Q5GAN4 147 aaKnown RBP4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 ZNF660Q6AZW8 331 aaPredicted RBP4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 CYB5R2Q6BCY4 276 aa4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 ADGRD2Q7Z7M1 963 aa4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 ADGRG3Q86Y34 549 aa4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 CPXM2Q8N436 756 aa4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 BBS1Q8NFJ9 593 aa4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 OR13C5Q8NGS8 318 aa4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 OR1S1Q8NH92 325 aa4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 STAG3L4Q8TBR4 150 aa4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 DERL2Q9GZP9 239 aa4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 SLC25A51Q9H1U9 297 aa4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 ISG20L2Q9H9L3 353 aaKnown RBP4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 PAK6Q9NQU5 681 aaPredicted RBP4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 PRDM9Q9NQV7 894 aa4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 BTNL2Q9UIR0 455 aa4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 ERVW-1Q9UQF0 538 aa4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 PMS2P1A4D2B8 440 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 FAM25AB3EWG3 89 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 FAM25CB3EWG5 89 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 FAM25GB3EWG6 89 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 PSMD3O43242 534 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 ADAM11O75078 769 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 ICOSLGO75144 302 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 STAU1O95793 577 aaKnown RBP4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 HSD3B2P26439 372 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 HOXC13P31276 330 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 TIE1P35590 1138 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 KIR3DL1P43629 444 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 FXYD6P3P58550 94 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 MTAPQ13126 283 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 PIN1Q13526 163 aaPredicted RBP4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 CCDC85BQ15834 202 aaPredicted RBP4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 PPP1R3BQ86XI6 285 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 LGI4Q8N135 537 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 SVOPLQ8N434 492 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 STX19Q8N4C7 294 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 OR4F15Q8NGB8 312 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 RASSF5Q8WWW0 418 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 MRPS31Q92665 395 aaKnown RBP4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 KCNJ9Q92806 393 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 FAM120BQ96EK7 910 aaKnown RBP4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 PDXPQ96GD0 296 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 SLC6A16Q9GZN6 736 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 ELOVL6Q9H5J4 265 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 TFB2MQ9H5Q4 396 aaKnown RBP4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 AUNIPQ9H7T9 357 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 TRIM45Q9H8W5 580 aaPredicted RBP4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 ACKR4Q9NPB9 350 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 GSN-AS1Q9NRJ2 163 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 MRPL17Q9NRX2 175 aaKnown RBP4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 NDUFB11Q9NX14 153 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 MID2Q9UJV3 735 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 PPIEQ9UNP9 301 aaKnown RBP4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 DTX4Q9Y2E6 619 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 HYKKA2RU49 373 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 ZNF593O00488 134 aaPredicted RBP4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 IMPA2O14732 288 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 FFAR2O15552 330 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 FMO6PO60774 539 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 RFPL3O75679 317 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 SULT1A3P0DMM9 295 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 SULT1A4P0DMN0 295 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 CBR1P16152 277 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 CCNCP24863 283 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 SGSHP51688 502 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 ZNF140P52738 457 aaPredicted RBP4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 HMGA2P52926 109 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 FOXK2Q01167 660 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 YWHAHQ04917 246 aaPredicted RBP4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 TIGD3Q6B0B8 471 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 FBXL22Q6P050 247 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 EIF3MQ7L2H7 374 aaKnown RBP4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 CDH24Q86UP0 819 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 OR6K2Q8NGY2 324 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 GPR148Q8TDV2 347 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 FAM162AQ96A26 154 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 ELP4Q96EB1 424 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 COPS8Q99627 209 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 TLNRD1Q9H1K6 362 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 SYNPO2LQ9H987 977 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 NMNAT1Q9HAN9 279 aaPredicted RBP4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 TPT1P8Q9HAU6 139 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 SLC2A4RGQ9NR83 387 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 C5AR2Q9P296 337 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 CTSFQ9UBX1 484 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 ING1Q9UK53 422 aaPredicted RBP4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 ZMIZ1Q9ULJ6 1067 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 CA5BQ9Y2D0 317 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms