RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 PTGER4P35408 488 aa16.46■□□□□ 0.23
MSH6-207ENST00000456246 DNASE1L1P49184 302 aa16.46■□□□□ 0.23
MSH6-207ENST00000456246 ACSM2AQ08AH3 577 aa16.46■□□□□ 0.23
MSH6-207ENST00000456246 MAP4K2Q12851 820 aa16.46■□□□□ 0.23
MSH6-207ENST00000456246 RPS6KA2Q15349 733 aa16.46■□□□□ 0.23
MSH6-207ENST00000456246 ACSM2BQ68CK6 577 aa16.46■□□□□ 0.23
MSH6-207ENST00000456246 ZYG11AQ6WRX3 759 aa16.46■□□□□ 0.23
MSH6-207ENST00000456246 ZNF615Q8N8J6 731 aa16.46■□□□□ 0.23
MSH6-207ENST00000456246 LRRN4CLQ8ND94 238 aa16.46■□□□□ 0.23
MSH6-207ENST00000456246 KLHL29Q96CT2 875 aa16.46■□□□□ 0.23
MSH6-207ENST00000456246 HBEGFQ99075 208 aa16.46■□□□□ 0.23
MSH6-207ENST00000456246 QPCTLQ9NXS2 382 aa16.46■□□□□ 0.23
MSH6-207ENST00000456246 TUBA8Q9NY65 449 aaPredicted RBP16.46■□□□□ 0.23
MSH6-207ENST00000456246 B4GALT7Q9UBV7 327 aa16.46■□□□□ 0.23
MSH6-207ENST00000456246 MID2Q9UJV3 735 aa16.46■□□□□ 0.23
MSH6-207ENST00000456246 CHCHD2Q9Y6H1 151 aaPredicted RBP16.46■□□□□ 0.23
MSH6-207ENST00000456246 CACNA1CQ13936 2221 aa16.45■□□□□ 0.22
MSH6-207ENST00000456246 AQP7O14520 342 aa16.45■□□□□ 0.22
MSH6-207ENST00000456246 PCDH7O60245 1069 aa16.45■□□□□ 0.22
MSH6-207ENST00000456246 HCN1O60741 890 aa16.45■□□□□ 0.22
MSH6-207ENST00000456246 ERAL1O75616 437 aaKnown RBP16.45■□□□□ 0.22
MSH6-207ENST00000456246 PDE9AO76083 593 aa16.45■□□□□ 0.22
MSH6-207ENST00000456246 CT62P0C5K7 136 aa16.45■□□□□ 0.22
MSH6-207ENST00000456246 CRHR1P34998 444 aa16.45■□□□□ 0.22
MSH6-207ENST00000456246 MAGEA5P43359 124 aa16.45■□□□□ 0.22
MSH6-207ENST00000456246 NR0B1P51843 470 aaKnown RBP16.45■□□□□ 0.22
MSH6-207ENST00000456246 SLC10A1Q14973 349 aa16.45■□□□□ 0.22
MSH6-207ENST00000456246 HEPACAMQ14CZ8 416 aa16.45■□□□□ 0.22
MSH6-207ENST00000456246 PRICKLE4Q2TBC4 344 aa16.45■□□□□ 0.22
MSH6-207ENST00000456246 TCHHL1Q5QJ38 904 aaPredicted RBP16.45■□□□□ 0.22
MSH6-207ENST00000456246 GALNT18Q6P9A2 607 aa16.45■□□□□ 0.22
MSH6-207ENST00000456246 TRILQ7L0X0 811 aa16.45■□□□□ 0.22
MSH6-207ENST00000456246 HOMEZQ8IX15 550 aa16.45■□□□□ 0.22
MSH6-207ENST00000456246 LRRC25Q8N386 305 aaPredicted RBP16.45■□□□□ 0.22
MSH6-207ENST00000456246 CCNYL1Q8N7R7 359 aa16.45■□□□□ 0.22
MSH6-207ENST00000456246 OR10G3Q8NGC4 313 aa16.45■□□□□ 0.22
MSH6-207ENST00000456246 DOK4Q8TEW6 326 aa16.45■□□□□ 0.22
MSH6-207ENST00000456246 SMC6Q96SB8 1091 aa16.45■□□□□ 0.22
MSH6-207ENST00000456246 ACPTQ9BZG2 426 aa16.45■□□□□ 0.22
MSH6-207ENST00000456246 GSTO2Q9H4Y5 243 aa16.45■□□□□ 0.22
MSH6-207ENST00000456246 ZFP64Q9NPA5 681 aa16.45■□□□□ 0.22
MSH6-207ENST00000456246 EMCNQ9ULC0 261 aa16.45■□□□□ 0.22
MSH6-207ENST00000456246 EML6Q6ZMW3 1958 aa16.45■□□□□ 0.22
MSH6-207ENST00000456246 GNG14A0A1W2PPG7 69 aa16.44■□□□□ 0.22
MSH6-207ENST00000456246 A0A1W2PPM1 405 aa16.44■□□□□ 0.22
MSH6-207ENST00000456246 A0A1W2PS29 197 aa16.44■□□□□ 0.22
MSH6-207ENST00000456246 FIGNL2A6NMB9 653 aa16.44■□□□□ 0.22
MSH6-207ENST00000456246 ZNHIT1O43257 154 aa16.44■□□□□ 0.22
MSH6-207ENST00000456246 PROCP04070 461 aa16.44■□□□□ 0.22
MSH6-207ENST00000456246 SHBGP04278 402 aa16.44■□□□□ 0.22
MSH6-207ENST00000456246 NAGAP17050 411 aa16.44■□□□□ 0.22
MSH6-207ENST00000456246 PIGAP37287 484 aa16.44■□□□□ 0.22
MSH6-207ENST00000456246 ALDH9A1P49189 494 aa16.44■□□□□ 0.22
MSH6-207ENST00000456246 DNAJB13P59910 316 aa16.44■□□□□ 0.22
MSH6-207ENST00000456246 CFAP157Q5JU67 520 aa16.44■□□□□ 0.22
MSH6-207ENST00000456246 C3P1Q6ZMU1 363 aa16.44■□□□□ 0.22
MSH6-207ENST00000456246 SH2D5Q6ZV89 423 aa16.44■□□□□ 0.22
MSH6-207ENST00000456246 CA5BP1Q8WTZ4 195 aa16.44■□□□□ 0.22
MSH6-207ENST00000456246 ASB5Q8WWX0 329 aa16.44■□□□□ 0.22
MSH6-207ENST00000456246 ADIPOR1Q96A54 375 aa16.44■□□□□ 0.22
MSH6-207ENST00000456246 ERP27Q96DN0 273 aa16.44■□□□□ 0.22
MSH6-207ENST00000456246 ZNF597Q96LX8 424 aa16.44■□□□□ 0.22
MSH6-207ENST00000456246 DOHHQ9BU89 302 aa16.44■□□□□ 0.22
MSH6-207ENST00000456246 BRINP2Q9C0B6 783 aa16.44■□□□□ 0.22
MSH6-207ENST00000456246 LDAHQ9H6V9 325 aa16.44■□□□□ 0.22
MSH6-207ENST00000456246 ZNF703Q9H7S9 590 aaPredicted RBP16.44■□□□□ 0.22
MSH6-207ENST00000456246 MID1IP1Q9NPA3 183 aa16.44■□□□□ 0.22
MSH6-207ENST00000456246 GIMAP4Q9NUV9 329 aa16.44■□□□□ 0.22
MSH6-207ENST00000456246 SIRT5Q9NXA8 310 aa16.44■□□□□ 0.22
MSH6-207ENST00000456246 MAT2BQ9NZL9 334 aa16.44■□□□□ 0.22
MSH6-207ENST00000456246 PRODH2Q9UF12 536 aa16.44■□□□□ 0.22
MSH6-207ENST00000456246 UTS2RQ9UKP6 389 aa16.44■□□□□ 0.22
MSH6-207ENST00000456246 CNOT11Q9UKZ1 510 aaKnown RBP16.44■□□□□ 0.22
MSH6-207ENST00000456246 NPFFR2Q9Y5X5 522 aa16.44■□□□□ 0.22
MSH6-207ENST00000456246 PKDREJQ9NTG1 2253 aa16.43■□□□□ 0.22
MSH6-207ENST00000456246 CREBBPQ92793 2442 aa16.43■□□□□ 0.22
MSH6-207ENST00000456246 G3V2L1 256 aa16.43■□□□□ 0.22
MSH6-207ENST00000456246 COPEO14579 308 aa16.43■□□□□ 0.22
MSH6-207ENST00000456246 ACOX3O15254 700 aa16.43■□□□□ 0.22
MSH6-207ENST00000456246 PLIN3O60664 434 aa16.43■□□□□ 0.22
MSH6-207ENST00000456246 BCAS2O75934 225 aaPredicted RBP16.43■□□□□ 0.22
MSH6-207ENST00000456246 SNX4O95219 450 aa16.43■□□□□ 0.22
MSH6-207ENST00000456246 COX6B1P14854 86 aa16.43■□□□□ 0.22
MSH6-207ENST00000456246 GPX3P22352 226 aa16.43■□□□□ 0.22
MSH6-207ENST00000456246 GRNP28799 593 aaKnown RBP16.43■□□□□ 0.22
MSH6-207ENST00000456246 TIA1P31483 386 aaKnown RBP eCLIP16.43■□□□□ 0.22
MSH6-207ENST00000456246 FEN1P39748 380 aaKnown RBP16.43■□□□□ 0.22
MSH6-207ENST00000456246 SLCO1A2P46721 670 aa16.43■□□□□ 0.22
MSH6-207ENST00000456246 MAN2A2P49641 1150 aa16.43■□□□□ 0.22
MSH6-207ENST00000456246 HTR6P50406 440 aa16.43■□□□□ 0.22
MSH6-207ENST00000456246 DCAF7P61962 342 aa16.43■□□□□ 0.22
MSH6-207ENST00000456246 PSPHP78330 225 aa16.43■□□□□ 0.22
MSH6-207ENST00000456246 PRAMEF20Q5VT98 475 aa16.43■□□□□ 0.22
MSH6-207ENST00000456246 FRMD7Q6ZUT3 714 aa16.43■□□□□ 0.22
MSH6-207ENST00000456246 ACAD11Q709F0 780 aa16.43■□□□□ 0.22
MSH6-207ENST00000456246 RIBC1Q8N443 379 aaPredicted RBP16.43■□□□□ 0.22
MSH6-207ENST00000456246 CCDC63Q8NA47 563 aa16.43■□□□□ 0.22
MSH6-207ENST00000456246 ZNF675Q8TD23 568 aa16.43■□□□□ 0.22
MSH6-207ENST00000456246 DIO2Q92813 273 aa16.43■□□□□ 0.22
MSH6-207ENST00000456246 SARAFQ96BY9 339 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms