RNA–Protein interactions for RNA: ENST00000455343.5

RBM39-220, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-220ENST00000455343 APOC4-APOC2K7ER74 178 aa3.38□□□□□ -1.87
RBM39-220ENST00000455343 SGK494L7N484 410 aa3.38□□□□□ -1.87
RBM39-220ENST00000455343 MYO1CO00159 1063 aa3.38□□□□□ -1.87
RBM39-220ENST00000455343 FCHO1O14526 889 aa3.38□□□□□ -1.87
RBM39-220ENST00000455343 HAT1O14929 419 aa3.38□□□□□ -1.87
RBM39-220ENST00000455343 MPPED1O15442 326 aa3.38□□□□□ -1.87
RBM39-220ENST00000455343 KIF5CO60282 957 aa3.38□□□□□ -1.87
RBM39-220ENST00000455343 HCN1O60741 890 aa3.38□□□□□ -1.87
RBM39-220ENST00000455343 SMPD2O60906 423 aa3.38□□□□□ -1.87
RBM39-220ENST00000455343 DNAJB6O75190 326 aa3.38□□□□□ -1.87
RBM39-220ENST00000455343 CDC123O75794 336 aaPredicted RBP3.38□□□□□ -1.87
RBM39-220ENST00000455343 APOC2P02655 101 aa3.38□□□□□ -1.87
RBM39-220ENST00000455343 TUBB4AP04350 444 aa3.38□□□□□ -1.87
RBM39-220ENST00000455343 APOA4P06727 396 aa3.38□□□□□ -1.87
RBM39-220ENST00000455343 FHP07954 510 aa3.38□□□□□ -1.87
RBM39-220ENST00000455343 PAX1P15863 534 aa3.38□□□□□ -1.87
RBM39-220ENST00000455343 TPH1P17752 444 aa3.38□□□□□ -1.87
RBM39-220ENST00000455343 IL1RNP18510 177 aa3.38□□□□□ -1.87
RBM39-220ENST00000455343 TIMP3P35625 211 aa3.38□□□□□ -1.87
RBM39-220ENST00000455343 SLC1A1P43005 524 aa3.38□□□□□ -1.87
RBM39-220ENST00000455343 MAGEA5P43359 124 aa3.38□□□□□ -1.87
RBM39-220ENST00000455343 BDKRB1P46663 353 aa3.38□□□□□ -1.87
RBM39-220ENST00000455343 ZNF136P52737 540 aa3.38□□□□□ -1.87
RBM39-220ENST00000455343 OR4D2P58180 307 aa3.38□□□□□ -1.87
RBM39-220ENST00000455343 RPS7P62081 194 aaKnown RBP3.38□□□□□ -1.87
RBM39-220ENST00000455343 ABATP80404 500 aa3.38□□□□□ -1.87
RBM39-220ENST00000455343 SPARCL1Q14515 664 aa3.38□□□□□ -1.87
RBM39-220ENST00000455343 SEMA3AQ14563 771 aa3.38□□□□□ -1.87
RBM39-220ENST00000455343 SLC10A1Q14973 349 aa3.38□□□□□ -1.87
RBM39-220ENST00000455343 HSPB2Q16082 182 aa3.38□□□□□ -1.87
RBM39-220ENST00000455343 TYSND1Q2T9J0 566 aa3.38□□□□□ -1.87
RBM39-220ENST00000455343 FILIP1LQ4L180 1135 aa3.38□□□□□ -1.87
RBM39-220ENST00000455343 ANKRD20A4Q4UJ75 823 aa3.38□□□□□ -1.87
RBM39-220ENST00000455343 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.38□□□□□ -1.87
RBM39-220ENST00000455343 WLSQ5T9L3 541 aa3.38□□□□□ -1.87
RBM39-220ENST00000455343 NDUFAF5Q5TEU4 345 aa3.38□□□□□ -1.87
RBM39-220ENST00000455343 HEPHL1Q6MZM0 1159 aa3.38□□□□□ -1.87
RBM39-220ENST00000455343 QSOX2Q6ZRP7 698 aa3.38□□□□□ -1.87
RBM39-220ENST00000455343 BBS12Q6ZW61 710 aa3.38□□□□□ -1.87
RBM39-220ENST00000455343 YTHDF3Q7Z739 585 aaKnown RBP3.38□□□□□ -1.87
RBM39-220ENST00000455343 SLC22A16Q86VW1 577 aa3.38□□□□□ -1.87
RBM39-220ENST00000455343 HIPK1Q86Z02 1210 aa3.38□□□□□ -1.87
RBM39-220ENST00000455343 PLD3Q8IV08 490 aa3.38□□□□□ -1.87
RBM39-220ENST00000455343 P3H2Q8IVL5 708 aa3.38□□□□□ -1.87
RBM39-220ENST00000455343 GPALPP1Q8IXQ4 340 aa3.38□□□□□ -1.87
RBM39-220ENST00000455343 KRT222Q8N1A0 295 aa3.38□□□□□ -1.87
RBM39-220ENST00000455343 FAM109AQ8N4B1 249 aa3.38□□□□□ -1.87
RBM39-220ENST00000455343 RAB42Q8N4Z0 105 aa3.38□□□□□ -1.87
RBM39-220ENST00000455343 TMEM156Q8N614 296 aa3.38□□□□□ -1.87
RBM39-220ENST00000455343 OR2M7Q8NG81 312 aa3.38□□□□□ -1.87
RBM39-220ENST00000455343 OR9A1PQ8NGU1 263 aa3.38□□□□□ -1.87
RBM39-220ENST00000455343 SLC35G2Q8TBE7 412 aa3.38□□□□□ -1.87
RBM39-220ENST00000455343 MAGEC3Q8TD91 643 aa3.38□□□□□ -1.87
RBM39-220ENST00000455343 RERGQ96A58 199 aaPredicted RBP3.38□□□□□ -1.87
RBM39-220ENST00000455343 TBC1D20Q96BZ9 403 aa3.38□□□□□ -1.87
RBM39-220ENST00000455343 CCDC138Q96M89 665 aa3.38□□□□□ -1.87
RBM39-220ENST00000455343 ZNF778Q96MU6 729 aa3.38□□□□□ -1.87
RBM39-220ENST00000455343 NAP1L5Q96NT1 182 aaPredicted RBP3.38□□□□□ -1.87
RBM39-220ENST00000455343 DACH2Q96NX9 599 aa3.38□□□□□ -1.87
RBM39-220ENST00000455343 PPP1R2P1Q96PQ5 205 aa3.38□□□□□ -1.87
RBM39-220ENST00000455343 SECISBP2Q96T21 854 aaKnown RBP3.38□□□□□ -1.87
RBM39-220ENST00000455343 TBL1YQ9BQ87 522 aa3.38□□□□□ -1.87
RBM39-220ENST00000455343 CNPPD1Q9BV87 410 aa3.38□□□□□ -1.87
RBM39-220ENST00000455343 DEFB126Q9BYW3 111 aa3.38□□□□□ -1.87
RBM39-220ENST00000455343 ATG10Q9H0Y0 220 aa3.38□□□□□ -1.87
RBM39-220ENST00000455343 P2RY12Q9H244 342 aa3.38□□□□□ -1.87
RBM39-220ENST00000455343 IL1RL2Q9HB29 575 aa3.38□□□□□ -1.87
RBM39-220ENST00000455343 DDX56Q9NY93 547 aaKnown RBP3.38□□□□□ -1.87
RBM39-220ENST00000455343 UTP6Q9NYH9 597 aaKnown RBP3.38□□□□□ -1.87
RBM39-220ENST00000455343 HCN3Q9P1Z3 774 aa3.38□□□□□ -1.87
RBM39-220ENST00000455343 RNF7Q9UBF6 113 aa3.38□□□□□ -1.87
RBM39-220ENST00000455343 TAC3Q9UHF0 121 aa3.38□□□□□ -1.87
RBM39-220ENST00000455343 PCYOX1Q9UHG3 505 aa3.38□□□□□ -1.87
RBM39-220ENST00000455343 ACAD8Q9UKU7 415 aa3.38□□□□□ -1.87
RBM39-220ENST00000455343 RUVBL2Q9Y230 463 aaKnown RBP3.38□□□□□ -1.87
RBM39-220ENST00000455343 YARS2Q9Y2Z4 477 aaKnown RBP3.38□□□□□ -1.87
RBM39-220ENST00000455343 CLDN16Q9Y5I7 305 aa3.38□□□□□ -1.87
RBM39-220ENST00000455343 SONP18583 2426 aaKnown RBP3.37□□□□□ -1.87
RBM39-220ENST00000455343 A0A0G2JMM0 328 aa3.37□□□□□ -1.87
RBM39-220ENST00000455343 A0A1W2PPB8 328 aa3.37□□□□□ -1.87
RBM39-220ENST00000455343 A0A1W2PRS3 328 aa3.37□□□□□ -1.87
RBM39-220ENST00000455343 TLDC2A0PJX2 215 aa3.37□□□□□ -1.87
RBM39-220ENST00000455343 FAM166BA8MTA8 275 aa3.37□□□□□ -1.87
RBM39-220ENST00000455343 KIR3DP1A8MWS1 328 aa3.37□□□□□ -1.87
RBM39-220ENST00000455343 KDM4EB2RXH2 506 aaPredicted RBP3.37□□□□□ -1.87
RBM39-220ENST00000455343 PRMT5O14744 637 aaPredicted RBP3.37□□□□□ -1.87
RBM39-220ENST00000455343 KPNA5O15131 536 aa3.37□□□□□ -1.87
RBM39-220ENST00000455343 SLC16A5O15375 505 aa3.37□□□□□ -1.87
RBM39-220ENST00000455343 PRKNO60260 465 aaPredicted RBP3.37□□□□□ -1.87
RBM39-220ENST00000455343 LCMT2O60294 686 aaKnown RBP3.37□□□□□ -1.87
RBM39-220ENST00000455343 GALR3O60755 368 aaPredicted RBP3.37□□□□□ -1.87
RBM39-220ENST00000455343 ZNF354AO60765 605 aaPredicted RBP3.37□□□□□ -1.87
RBM39-220ENST00000455343 RDH16O75452 317 aa3.37□□□□□ -1.87
RBM39-220ENST00000455343 PSIP1O75475 530 aaKnown RBP3.37□□□□□ -1.87
RBM39-220ENST00000455343 METTL18O95568 372 aa3.37□□□□□ -1.87
RBM39-220ENST00000455343 SLC16A8O95907 504 aa3.37□□□□□ -1.87
RBM39-220ENST00000455343 EPPINO95925 133 aa3.37□□□□□ -1.87
RBM39-220ENST00000455343 GOT2P00505 430 aaKnown RBP3.37□□□□□ -1.87
RBM39-220ENST00000455343 IFNA2P01563 188 aa3.37□□□□□ -1.87
RBM39-220ENST00000455343 SBK3P0C264 359 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms