RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 NAT9Q9BTE0 207 aa5.46□□□□□ -1.54
HLA-DPA3-207ENST00000454398 TBCDQ9BTW9 1192 aa5.46□□□□□ -1.54
HLA-DPA3-207ENST00000454398 ITPAQ9BY32 194 aa5.46□□□□□ -1.54
HLA-DPA3-207ENST00000454398 NXF5Q9H1B4 397 aaKnown RBP5.46□□□□□ -1.54
HLA-DPA3-207ENST00000454398 DPH5Q9H2P9 285 aa5.46□□□□□ -1.54
HLA-DPA3-207ENST00000454398 METTL7AQ9H8H3 244 aa5.46□□□□□ -1.54
HLA-DPA3-207ENST00000454398 CNOT10Q9H9A5 744 aaKnown RBP5.46□□□□□ -1.54
HLA-DPA3-207ENST00000454398 ANKRA2Q9H9E1 313 aa5.46□□□□□ -1.54
HLA-DPA3-207ENST00000454398 SLC24A3Q9HC58 644 aa5.46□□□□□ -1.54
HLA-DPA3-207ENST00000454398 NEUROD4Q9HD90 331 aa5.46□□□□□ -1.54
HLA-DPA3-207ENST00000454398 ACKR4Q9NPB9 350 aa5.46□□□□□ -1.54
HLA-DPA3-207ENST00000454398 GPRC5BQ9NZH0 403 aa5.46□□□□□ -1.54
HLA-DPA3-207ENST00000454398 HEY2Q9UBP5 337 aa5.46□□□□□ -1.54
HLA-DPA3-207ENST00000454398 SNX12Q9UMY4 172 aa5.46□□□□□ -1.54
HLA-DPA3-207ENST00000454398 JRKLQ9Y4A0 524 aa5.46□□□□□ -1.54
HLA-DPA3-207ENST00000454398 SPACA6W5XKT8 324 aa5.46□□□□□ -1.54
HLA-DPA3-207ENST00000454398 ANK2Q01484 3957 aa5.46□□□□□ -1.54
HLA-DPA3-207ENST00000454398 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.46□□□□□ -1.54
HLA-DPA3-207ENST00000454398 C2orf92A0A1B0GVN3 265 aa5.45□□□□□ -1.54
HLA-DPA3-207ENST00000454398 TCRBV9S1A1TA0A576 114 aa5.45□□□□□ -1.54
HLA-DPA3-207ENST00000454398 CD8B2A6NJW9 211 aa5.45□□□□□ -1.54
HLA-DPA3-207ENST00000454398 DEFB108AA8MXU0 73 aa5.45□□□□□ -1.54
HLA-DPA3-207ENST00000454398 FAM47E-STBD1D6RA91 191 aa5.45□□□□□ -1.54
HLA-DPA3-207ENST00000454398 DYRK3O43781 588 aa5.45□□□□□ -1.54
HLA-DPA3-207ENST00000454398 GMFGO60234 142 aa5.45□□□□□ -1.54
HLA-DPA3-207ENST00000454398 ERN1O75460 977 aaKnown RBP5.45□□□□□ -1.54
HLA-DPA3-207ENST00000454398 SIX3O95343 332 aaPredicted RBP5.45□□□□□ -1.54
HLA-DPA3-207ENST00000454398 TGM6O95932 706 aa5.45□□□□□ -1.54
HLA-DPA3-207ENST00000454398 C1QAP02745 245 aa5.45□□□□□ -1.54
HLA-DPA3-207ENST00000454398 HPNP05981 417 aa5.45□□□□□ -1.54
HLA-DPA3-207ENST00000454398 FAM58BPP0C7Q3 252 aa5.45□□□□□ -1.54
HLA-DPA3-207ENST00000454398 SLC35E2BP0CK96 405 aa5.45□□□□□ -1.54
HLA-DPA3-207ENST00000454398 FOSL1P15407 271 aa5.45□□□□□ -1.54
HLA-DPA3-207ENST00000454398 NT5EP21589 574 aa5.45□□□□□ -1.54
HLA-DPA3-207ENST00000454398 GPX3P22352 226 aa5.45□□□□□ -1.54
HLA-DPA3-207ENST00000454398 CTSSP25774 331 aa5.45□□□□□ -1.54
HLA-DPA3-207ENST00000454398 GSTM2P28161 218 aa5.45□□□□□ -1.54
HLA-DPA3-207ENST00000454398 ABCD3P28288 659 aa5.45□□□□□ -1.54
HLA-DPA3-207ENST00000454398 PTPN6P29350 595 aa5.45□□□□□ -1.54
HLA-DPA3-207ENST00000454398 SERPINB3P29508 390 aa5.45□□□□□ -1.54
HLA-DPA3-207ENST00000454398 BSGP35613 385 aa5.45□□□□□ -1.54
HLA-DPA3-207ENST00000454398 TIMP3P35625 211 aa5.45□□□□□ -1.54
HLA-DPA3-207ENST00000454398 CASP3P42574 277 aa5.45□□□□□ -1.54
HLA-DPA3-207ENST00000454398 MRPS35P82673 323 aaKnown RBP5.45□□□□□ -1.54
HLA-DPA3-207ENST00000454398 SORDQ00796 357 aa5.45□□□□□ -1.54
HLA-DPA3-207ENST00000454398 PLCXD2Q0VAA5 305 aa5.45□□□□□ -1.54
HLA-DPA3-207ENST00000454398 DAZAP2Q15038 168 aaPredicted RBP5.45□□□□□ -1.54
HLA-DPA3-207ENST00000454398 ZKSCAN8Q15776 578 aaPredicted RBP5.45□□□□□ -1.54
HLA-DPA3-207ENST00000454398 CPSF6Q16630 551 aaKnown RBP eCLIP5.45□□□□□ -1.54
HLA-DPA3-207ENST00000454398 SPRED3Q2MJR0 410 aa5.45□□□□□ -1.54
HLA-DPA3-207ENST00000454398 TMEM35AQ53FP2 167 aa5.45□□□□□ -1.54
HLA-DPA3-207ENST00000454398 SGO1Q5FBB7 561 aa5.45□□□□□ -1.54
HLA-DPA3-207ENST00000454398 PAGE2BQ5JRK9 111 aa5.45□□□□□ -1.54
HLA-DPA3-207ENST00000454398 VASNQ6EMK4 673 aa5.45□□□□□ -1.54
HLA-DPA3-207ENST00000454398 OR4C11Q6IEV9 310 aa5.45□□□□□ -1.54
HLA-DPA3-207ENST00000454398 SULT1C3Q6IMI6 304 aa5.45□□□□□ -1.54
HLA-DPA3-207ENST00000454398 GRHL2Q6ISB3 625 aa5.45□□□□□ -1.54
HLA-DPA3-207ENST00000454398 VWA1Q6PCB0 445 aa5.45□□□□□ -1.54
HLA-DPA3-207ENST00000454398 FAM111BQ6SJ93 734 aa5.45□□□□□ -1.54
HLA-DPA3-207ENST00000454398 ZNF662Q6ZS27 426 aa5.45□□□□□ -1.54
HLA-DPA3-207ENST00000454398 C22orf34Q6ZV56 151 aa5.45□□□□□ -1.54
HLA-DPA3-207ENST00000454398 RPS27LQ71UM5 84 aaKnown RBP5.45□□□□□ -1.54
HLA-DPA3-207ENST00000454398 CAMKMTQ7Z624 323 aa5.45□□□□□ -1.54
HLA-DPA3-207ENST00000454398 YTHDF3Q7Z739 585 aaKnown RBP5.45□□□□□ -1.54
HLA-DPA3-207ENST00000454398 LSRQ86X29 649 aaPredicted RBP5.45□□□□□ -1.54
HLA-DPA3-207ENST00000454398 P3H2Q8IVL5 708 aa5.45□□□□□ -1.54
HLA-DPA3-207ENST00000454398 CTAGE3PQ8IX95 158 aa5.45□□□□□ -1.54
HLA-DPA3-207ENST00000454398 GALNT12Q8IXK2 581 aa5.45□□□□□ -1.54
HLA-DPA3-207ENST00000454398 LAS2Q8IYD9 372 aa5.45□□□□□ -1.54
HLA-DPA3-207ENST00000454398 UBQLNLQ8IYU4 475 aa5.45□□□□□ -1.54
HLA-DPA3-207ENST00000454398 ST13P4Q8IZP2 240 aaPredicted RBP5.45□□□□□ -1.54
HLA-DPA3-207ENST00000454398 TAGAPQ8N103 731 aa5.45□□□□□ -1.54
HLA-DPA3-207ENST00000454398 CNEP1R1Q8N9A8 125 aa5.45□□□□□ -1.54
HLA-DPA3-207ENST00000454398 ADCY4Q8NFM4 1077 aa5.45□□□□□ -1.54
HLA-DPA3-207ENST00000454398 OR5M1Q8NGP8 315 aa5.45□□□□□ -1.54
HLA-DPA3-207ENST00000454398 OR14L1PQ8NHC6 308 aa5.45□□□□□ -1.54
HLA-DPA3-207ENST00000454398 UBTD2Q8WUN7 234 aa5.45□□□□□ -1.54
HLA-DPA3-207ENST00000454398 KCTD4Q8WVF5 259 aa5.45□□□□□ -1.54
HLA-DPA3-207ENST00000454398 ABTB1Q969K4 478 aaPredicted RBP5.45□□□□□ -1.54
HLA-DPA3-207ENST00000454398 PIK3IP1Q96FE7 263 aa5.45□□□□□ -1.54
HLA-DPA3-207ENST00000454398 RBM18Q96H35 190 aaKnown RBP5.45□□□□□ -1.54
HLA-DPA3-207ENST00000454398 NODALQ96S42 347 aa5.45□□□□□ -1.54
HLA-DPA3-207ENST00000454398 NAP1L3Q99457 506 aaPredicted RBP5.45□□□□□ -1.54
HLA-DPA3-207ENST00000454398 GPR22Q99680 433 aa5.45□□□□□ -1.54
HLA-DPA3-207ENST00000454398 RBBP8Q99708 897 aa5.45□□□□□ -1.54
HLA-DPA3-207ENST00000454398 CCL19Q99731 98 aa5.45□□□□□ -1.54
HLA-DPA3-207ENST00000454398 OSBPL11Q9BXB4 747 aa5.45□□□□□ -1.54
HLA-DPA3-207ENST00000454398 MRPL1Q9BYD6 325 aaKnown RBP5.45□□□□□ -1.54
HLA-DPA3-207ENST00000454398 CD244Q9BZW8 370 aa5.45□□□□□ -1.54
HLA-DPA3-207ENST00000454398 ROGDIQ9GZN7 287 aa5.45□□□□□ -1.54
HLA-DPA3-207ENST00000454398 OPN3Q9H1Y3 402 aaPredicted RBP5.45□□□□□ -1.54
HLA-DPA3-207ENST00000454398 NT5DC2Q9H857 520 aa5.45□□□□□ -1.54
HLA-DPA3-207ENST00000454398 ACTR8Q9H981 624 aa5.45□□□□□ -1.54
HLA-DPA3-207ENST00000454398 CXorf21Q9HAI6 301 aa5.45□□□□□ -1.54
HLA-DPA3-207ENST00000454398 SAYSD1Q9NPB0 183 aa5.45□□□□□ -1.54
HLA-DPA3-207ENST00000454398 MOCS1Q9NZB8 636 aa5.45□□□□□ -1.54
HLA-DPA3-207ENST00000454398 NUDT4Q9NZJ9 180 aa5.45□□□□□ -1.54
HLA-DPA3-207ENST00000454398 KLRF1Q9NZS2 232 aa5.45□□□□□ -1.54
HLA-DPA3-207ENST00000454398 CNIH4Q9P003 139 aa5.45□□□□□ -1.54
HLA-DPA3-207ENST00000454398 CLCF1Q9UBD9 225 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms