RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 PROX2Q3B8N5 592 aa11.1□□□□□ -0.63
VTA1-203ENST00000452973 COLEC12Q5KU26 742 aa11.1□□□□□ -0.63
VTA1-203ENST00000452973 GTF2IRD2BQ6EKJ0 949 aa11.1□□□□□ -0.63
VTA1-203ENST00000452973 GTF2IRD2Q86UP8 949 aa11.1□□□□□ -0.63
VTA1-203ENST00000452973 C11orf74Q86VG3 221 aa11.1□□□□□ -0.63
VTA1-203ENST00000452973 MEX3DQ86XN8 651 aaKnown RBP11.1□□□□□ -0.63
VTA1-203ENST00000452973 KRT73Q86Y46 540 aa11.1□□□□□ -0.63
VTA1-203ENST00000452973 ZNF420Q8TAQ5 688 aaPredicted RBP11.1□□□□□ -0.63
VTA1-203ENST00000452973 APH1BQ8WW43 257 aa11.1□□□□□ -0.63
VTA1-203ENST00000452973 TTYH1Q9H313 450 aaPredicted RBP11.1□□□□□ -0.63
VTA1-203ENST00000452973 PCOLCE2Q9UKZ9 415 aa11.1□□□□□ -0.63
VTA1-203ENST00000452973 PSME2Q9UL46 239 aa11.1□□□□□ -0.63
VTA1-203ENST00000452973 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.1□□□□□ -0.63
VTA1-203ENST00000452973 DUSP12Q9UNI6 340 aa11.1□□□□□ -0.63
VTA1-203ENST00000452973 ZNF99A8MXY4 864 aaPredicted RBP11.09□□□□□ -0.63
VTA1-203ENST00000452973 DPM1O60762 260 aa11.09□□□□□ -0.63
VTA1-203ENST00000452973 JUNBP17275 347 aaPredicted RBP11.09□□□□□ -0.63
VTA1-203ENST00000452973 PCMT1P22061 227 aa11.09□□□□□ -0.63
VTA1-203ENST00000452973 MAOBP27338 520 aa11.09□□□□□ -0.63
VTA1-203ENST00000452973 C21orf33P30042 268 aaPredicted RBP11.09□□□□□ -0.63
VTA1-203ENST00000452973 KCNJ5P48544 419 aa11.09□□□□□ -0.63
VTA1-203ENST00000452973 KHKP50053 298 aa11.09□□□□□ -0.63
VTA1-203ENST00000452973 XKP51811 444 aa11.09□□□□□ -0.63
VTA1-203ENST00000452973 NUP107P57740 925 aa11.09□□□□□ -0.63
VTA1-203ENST00000452973 YPEL5P62699 121 aa11.09□□□□□ -0.63
VTA1-203ENST00000452973 PRR5P85299 388 aa11.09□□□□□ -0.63
VTA1-203ENST00000452973 MVKQ03426 396 aa11.09□□□□□ -0.63
VTA1-203ENST00000452973 FCRL6Q6DN72 434 aa11.09□□□□□ -0.63
VTA1-203ENST00000452973 CHRDL2Q6WN34 429 aa11.09□□□□□ -0.63
VTA1-203ENST00000452973 CCDC103Q8IW40 242 aa11.09□□□□□ -0.63
VTA1-203ENST00000452973 FBLIM1Q8WUP2 373 aa11.09□□□□□ -0.63
VTA1-203ENST00000452973 FAR1Q8WVX9 515 aa11.09□□□□□ -0.63
VTA1-203ENST00000452973 SLC9A6Q92581 669 aa11.09□□□□□ -0.63
VTA1-203ENST00000452973 GAL3ST3Q96A11 431 aa11.09□□□□□ -0.63
VTA1-203ENST00000452973 ZNF354BQ96LW1 612 aa11.09□□□□□ -0.63
VTA1-203ENST00000452973 OR2A5Q96R48 311 aa11.09□□□□□ -0.63
VTA1-203ENST00000452973 GABARAPL3Q9BY60 117 aa11.09□□□□□ -0.63
VTA1-203ENST00000452973 CAPN10Q9HC96 672 aa11.09□□□□□ -0.63
VTA1-203ENST00000452973 CES1P1Q9UKY3 287 aa11.09□□□□□ -0.63
VTA1-203ENST00000452973 OR2A25A4D2G3 310 aa11.09□□□□□ -0.63
VTA1-203ENST00000452973 H3BN98 237 aa11.09□□□□□ -0.63
VTA1-203ENST00000452973 LDB3O75112 727 aa11.09□□□□□ -0.63
VTA1-203ENST00000452973 FHP07954 510 aa11.09□□□□□ -0.63
VTA1-203ENST00000452973 GGT2P36268 569 aa11.09□□□□□ -0.63
VTA1-203ENST00000452973 RABIFP47224 123 aa11.09□□□□□ -0.63
VTA1-203ENST00000452973 RPS6KA3P51812 740 aa11.09□□□□□ -0.63
VTA1-203ENST00000452973 LSM11P83369 360 aaKnown RBP eCLIP11.09□□□□□ -0.63
VTA1-203ENST00000452973 RUNX2Q13950 521 aa11.09□□□□□ -0.63
VTA1-203ENST00000452973 PTGES3Q15185 160 aaKnown RBP11.09□□□□□ -0.63
VTA1-203ENST00000452973 DCST1Q5T197 706 aa11.09□□□□□ -0.63
VTA1-203ENST00000452973 BHLHB9Q6PI77 547 aa11.09□□□□□ -0.63
VTA1-203ENST00000452973 OR5T3Q8NGG3 340 aa11.09□□□□□ -0.63
VTA1-203ENST00000452973 FLVCR1-AS1Q8TAF5 88 aa11.09□□□□□ -0.63
VTA1-203ENST00000452973 MUL1Q969V5 352 aa11.09□□□□□ -0.63
VTA1-203ENST00000452973 RERGQ96A58 199 aaPredicted RBP11.09□□□□□ -0.63
VTA1-203ENST00000452973 ELP4Q96EB1 424 aa11.09□□□□□ -0.63
VTA1-203ENST00000452973 ABHD8Q96I13 439 aa11.09□□□□□ -0.63
VTA1-203ENST00000452973 GAS2L1Q99501 681 aaPredicted RBP11.09□□□□□ -0.63
VTA1-203ENST00000452973 SH3GL3Q99963 347 aa11.09□□□□□ -0.63
VTA1-203ENST00000452973 C11orf16Q9NQ32 467 aa11.09□□□□□ -0.63
VTA1-203ENST00000452973 TRPV5Q9NQA5 729 aa11.09□□□□□ -0.63
VTA1-203ENST00000452973 EVA1BQ9NVM1 165 aa11.09□□□□□ -0.63
VTA1-203ENST00000452973 H0YGG7 62 aa11.08□□□□□ -0.64
VTA1-203ENST00000452973 LCKP06239 509 aa11.08□□□□□ -0.64
VTA1-203ENST00000452973 CD6P30203 668 aa11.08□□□□□ -0.64
VTA1-203ENST00000452973 MASP1P48740 699 aa11.08□□□□□ -0.64
VTA1-203ENST00000452973 RNF144AP50876 292 aaPredicted RBP11.08□□□□□ -0.64
VTA1-203ENST00000452973 ARF3P61204 181 aaPredicted RBP11.08□□□□□ -0.64
VTA1-203ENST00000452973 HOXC5Q00444 222 aa11.08□□□□□ -0.64
VTA1-203ENST00000452973 SUZ12Q15022 739 aaKnown RBP11.08□□□□□ -0.64
VTA1-203ENST00000452973 MLC1Q15049 377 aa11.08□□□□□ -0.64
VTA1-203ENST00000452973 KLHL17Q6TDP4 642 aa11.08□□□□□ -0.64
VTA1-203ENST00000452973 PSMA8Q8TAA3 256 aa11.08□□□□□ -0.64
VTA1-203ENST00000452973 IL4I1Q96RQ9 567 aa11.08□□□□□ -0.64
VTA1-203ENST00000452973 COPS4Q9BT78 406 aa11.08□□□□□ -0.64
VTA1-203ENST00000452973 DUSP21Q9H596 190 aa11.08□□□□□ -0.64
VTA1-203ENST00000452973 C3orf14Q9HBI5 128 aa11.08□□□□□ -0.64
VTA1-203ENST00000452973 DNAAF2Q9NVR5 837 aaKnown RBP11.08□□□□□ -0.64
VTA1-203ENST00000452973 GPR83Q9NYM4 423 aa11.08□□□□□ -0.64
VTA1-203ENST00000452973 HSPE1-MOB4S4R3N1 261 aa11.08□□□□□ -0.64
VTA1-203ENST00000452973 TNRC18O15417 2968 aaPredicted RBP11.08□□□□□ -0.64
VTA1-203ENST00000452973 H1F0P07305 194 aaKnown RBP11.08□□□□□ -0.64
VTA1-203ENST00000452973 PTNP21246 168 aa11.08□□□□□ -0.64
VTA1-203ENST00000452973 FUT5Q11128 374 aa11.08□□□□□ -0.64
VTA1-203ENST00000452973 NFATC3Q12968 1075 aa11.08□□□□□ -0.64
VTA1-203ENST00000452973 EIF2B5Q13144 721 aaKnown RBP11.08□□□□□ -0.64
VTA1-203ENST00000452973 TARDBPQ13148 414 aaKnown RBP eCLIP11.08□□□□□ -0.64
VTA1-203ENST00000452973 KIAA0895LQ68EN5 471 aa11.08□□□□□ -0.64
VTA1-203ENST00000452973 C16orf62Q7Z3J2 963 aa11.08□□□□□ -0.64
VTA1-203ENST00000452973 ZNF605Q86T29 641 aa11.08□□□□□ -0.64
VTA1-203ENST00000452973 OR6T1Q8NGN1 323 aa11.08□□□□□ -0.64
VTA1-203ENST00000452973 ZNF566Q969W8 418 aa11.08□□□□□ -0.64
VTA1-203ENST00000452973 SLC6A18Q96N87 628 aa11.08□□□□□ -0.64
VTA1-203ENST00000452973 OR7D2Q96RA2 312 aa11.08□□□□□ -0.64
VTA1-203ENST00000452973 PITX2Q99697 317 aa11.08□□□□□ -0.64
VTA1-203ENST00000452973 SARGQ9BW04 601 aa11.08□□□□□ -0.64
VTA1-203ENST00000452973 GSDMCQ9BYG8 508 aa11.08□□□□□ -0.64
VTA1-203ENST00000452973 CLCA2Q9UQC9 943 aa11.08□□□□□ -0.64
VTA1-203ENST00000452973 hCG_2014768A0A024R1R8 64 aa11.08□□□□□ -0.64
VTA1-203ENST00000452973 ZNF701M0R085 212 aaPredicted RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms