RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 PCDHA9Q9Y5H5 950 aa11.87□□□□□ -0.51
CHD3-206ENST00000452447 CHCHD2Q9Y6H1 151 aaPredicted RBP11.87□□□□□ -0.51
CHD3-206ENST00000452447 TRGV5A0A0B4J1U4 118 aa11.86□□□□□ -0.51
CHD3-206ENST00000452447 A0A1B0GVC2 190 aa11.86□□□□□ -0.51
CHD3-206ENST00000452447 HCN1O60741 890 aa11.86□□□□□ -0.51
CHD3-206ENST00000452447 ERAL1O75616 437 aaKnown RBP11.86□□□□□ -0.51
CHD3-206ENST00000452447 CLPSP04118 112 aa11.86□□□□□ -0.51
CHD3-206ENST00000452447 CELA3AP09093 270 aa11.86□□□□□ -0.51
CHD3-206ENST00000452447 CT62P0C5K7 136 aa11.86□□□□□ -0.51
CHD3-206ENST00000452447 ATP5F1P24539 256 aaPredicted RBP11.86□□□□□ -0.51
CHD3-206ENST00000452447 ACVR2AP27037 513 aa11.86□□□□□ -0.51
CHD3-206ENST00000452447 KIR3DL1P43629 444 aa11.86□□□□□ -0.51
CHD3-206ENST00000452447 RPS6KA2Q15349 733 aa11.86□□□□□ -0.51
CHD3-206ENST00000452447 NTRK2Q16620 822 aa11.86□□□□□ -0.51
CHD3-206ENST00000452447 TBCELQ5QJ74 424 aa11.86□□□□□ -0.51
CHD3-206ENST00000452447 ZNF678Q5SXM1 525 aa11.86□□□□□ -0.51
CHD3-206ENST00000452447 WLSQ5T9L3 541 aa11.86□□□□□ -0.51
CHD3-206ENST00000452447 TMEM198Q66K66 360 aa11.86□□□□□ -0.51
CHD3-206ENST00000452447 SLC48A1Q6P1K1 146 aa11.86□□□□□ -0.51
CHD3-206ENST00000452447 GPRIN3Q6ZVF9 776 aa11.86□□□□□ -0.51
CHD3-206ENST00000452447 SLC22A9Q8IVM8 553 aa11.86□□□□□ -0.51
CHD3-206ENST00000452447 CDYL2Q8N8U2 506 aa11.86□□□□□ -0.51
CHD3-206ENST00000452447 OR7G1Q8NGA0 311 aa11.86□□□□□ -0.51
CHD3-206ENST00000452447 OR10Q1Q8NGQ4 319 aa11.86□□□□□ -0.51
CHD3-206ENST00000452447 SPOCK3Q9BQ16 436 aa11.86□□□□□ -0.51
CHD3-206ENST00000452447 FAIM2Q9BWQ8 316 aa11.86□□□□□ -0.51
CHD3-206ENST00000452447 BRINP2Q9C0B6 783 aa11.86□□□□□ -0.51
CHD3-206ENST00000452447 ALKBH4Q9NXW9 302 aa11.86□□□□□ -0.51
CHD3-206ENST00000452447 TNFRSF10DQ9UBN6 386 aa11.86□□□□□ -0.51
CHD3-206ENST00000452447 VPS29Q9UBQ0 182 aa11.86□□□□□ -0.51
CHD3-206ENST00000452447 TBK1Q9UHD2 729 aa11.86□□□□□ -0.51
CHD3-206ENST00000452447 NPFFR2Q9Y5X5 522 aa11.86□□□□□ -0.51
CHD3-206ENST00000452447 ARHGAP21Q5T5U3 1957 aa11.86□□□□□ -0.51
CHD3-206ENST00000452447 EXPH5Q8NEV8 1989 aa11.86□□□□□ -0.51
CHD3-206ENST00000452447 AKAP9Q99996 3911 aa11.86□□□□□ -0.51
CHD3-206ENST00000452447 GOLGA8RI6L899 631 aa11.85□□□□□ -0.51
CHD3-206ENST00000452447 DLX3O60479 287 aa11.85□□□□□ -0.51
CHD3-206ENST00000452447 ULK1O75385 1050 aa11.85□□□□□ -0.51
CHD3-206ENST00000452447 ESRRBO95718 433 aa11.85□□□□□ -0.51
CHD3-206ENST00000452447 HSD3B1P14060 373 aa11.85□□□□□ -0.51
CHD3-206ENST00000452447 KRT15P19012 456 aa11.85□□□□□ -0.51
CHD3-206ENST00000452447 IMPDH1P20839 514 aa11.85□□□□□ -0.51
CHD3-206ENST00000452447 HSD3B2P26439 372 aa11.85□□□□□ -0.51
CHD3-206ENST00000452447 HMOX2P30519 316 aa11.85□□□□□ -0.51
CHD3-206ENST00000452447 FEN1P39748 380 aaKnown RBP11.85□□□□□ -0.51
CHD3-206ENST00000452447 ALDH9A1P49189 494 aa11.85□□□□□ -0.51
CHD3-206ENST00000452447 NUP107P57740 925 aa11.85□□□□□ -0.51
CHD3-206ENST00000452447 RPP38P78345 283 aaKnown RBP11.85□□□□□ -0.51
CHD3-206ENST00000452447 GALNT1Q10472 559 aaPredicted RBP11.85□□□□□ -0.51
CHD3-206ENST00000452447 UNC50Q53HI1 259 aa11.85□□□□□ -0.51
CHD3-206ENST00000452447 TMEM64Q6YI46 380 aa11.85□□□□□ -0.51
CHD3-206ENST00000452447 B3GNT6Q6ZMB0 384 aa11.85□□□□□ -0.51
CHD3-206ENST00000452447 VWA5B2Q8N398 1253 aa11.85□□□□□ -0.51
CHD3-206ENST00000452447 LIX1Q8N485 282 aa11.85□□□□□ -0.51
CHD3-206ENST00000452447 RPRMLQ8N4K4 120 aa11.85□□□□□ -0.51
CHD3-206ENST00000452447 C1orf52Q8N6N3 182 aaKnown RBP11.85□□□□□ -0.51
CHD3-206ENST00000452447 ZNF441Q8N8Z8 693 aa11.85□□□□□ -0.51
CHD3-206ENST00000452447 LILRB4Q8NHJ6 448 aa11.85□□□□□ -0.51
CHD3-206ENST00000452447 METTL6Q8TCB7 284 aa11.85□□□□□ -0.51
CHD3-206ENST00000452447 ACMSDQ8TDX5 336 aa11.85□□□□□ -0.51
CHD3-206ENST00000452447 TM4SF18Q96CE8 201 aa11.85□□□□□ -0.51
CHD3-206ENST00000452447 TMEM237Q96Q45 408 aa11.85□□□□□ -0.51
CHD3-206ENST00000452447 ZNF382Q96SR6 550 aa11.85□□□□□ -0.51
CHD3-206ENST00000452447 TRIM8Q9BZR9 551 aa11.85□□□□□ -0.51
CHD3-206ENST00000452447 ZNF703Q9H7S9 590 aaPredicted RBP11.85□□□□□ -0.51
CHD3-206ENST00000452447 KCNJ16Q9NPI9 418 aa11.85□□□□□ -0.51
CHD3-206ENST00000452447 QPCTLQ9NXS2 382 aa11.85□□□□□ -0.51
CHD3-206ENST00000452447 PSMC3IPQ9P2W1 217 aaPredicted RBP11.85□□□□□ -0.51
CHD3-206ENST00000452447 FETUBQ9UGM5 382 aa11.85□□□□□ -0.51
CHD3-206ENST00000452447 BCAP29Q9UHQ4 241 aa11.85□□□□□ -0.51
CHD3-206ENST00000452447 ZNF225Q9UK10 706 aa11.85□□□□□ -0.51
CHD3-206ENST00000452447 CFL2Q9Y281 166 aa11.85□□□□□ -0.51
CHD3-206ENST00000452447 ANKRD17O75179 2603 aaKnown RBP11.85□□□□□ -0.51
CHD3-206ENST00000452447 CCDC151A5D8V7 595 aa11.84□□□□□ -0.51
CHD3-206ENST00000452447 ANKRD33BA6NCL7 494 aa11.84□□□□□ -0.51
CHD3-206ENST00000452447 FAM90A27PA6NNH2 459 aa11.84□□□□□ -0.51
CHD3-206ENST00000452447 MANBAO00462 879 aa11.84□□□□□ -0.51
CHD3-206ENST00000452447 WDR1O75083 606 aa11.84□□□□□ -0.51
CHD3-206ENST00000452447 LRATO95237 230 aa11.84□□□□□ -0.51
CHD3-206ENST00000452447 ATP1B1P05026 303 aa11.84□□□□□ -0.51
CHD3-206ENST00000452447 GSTA1P08263 222 aa11.84□□□□□ -0.51
CHD3-206ENST00000452447 FAM153BP0C7A2 387 aa11.84□□□□□ -0.51
CHD3-206ENST00000452447 RFPL3SP0C7P2 107 aa11.84□□□□□ -0.51
CHD3-206ENST00000452447 PYGBP11216 843 aa11.84□□□□□ -0.51
CHD3-206ENST00000452447 CSNK2A2P19784 350 aaPredicted RBP11.84□□□□□ -0.51
CHD3-206ENST00000452447 SSTR2P30874 369 aa11.84□□□□□ -0.51
CHD3-206ENST00000452447 FBXW4P57775 412 aa11.84□□□□□ -0.51
CHD3-206ENST00000452447 TRA2BP62995 288 aaKnown RBP11.84□□□□□ -0.51
CHD3-206ENST00000452447 CSTF3Q12996 717 aaKnown RBP11.84□□□□□ -0.51
CHD3-206ENST00000452447 FAM153CQ494X1 144 aa11.84□□□□□ -0.51
CHD3-206ENST00000452447 TCHHL1Q5QJ38 904 aaPredicted RBP11.84□□□□□ -0.51
CHD3-206ENST00000452447 MEX3BQ6ZN04 569 aaKnown RBP11.84□□□□□ -0.51
CHD3-206ENST00000452447 PACS2Q86VP3 889 aa11.84□□□□□ -0.51
CHD3-206ENST00000452447 CCDC71Q8IV32 467 aaPredicted RBP11.84□□□□□ -0.51
CHD3-206ENST00000452447 LRRC25Q8N386 305 aaPredicted RBP11.84□□□□□ -0.51
CHD3-206ENST00000452447 ZNF615Q8N8J6 731 aa11.84□□□□□ -0.51
CHD3-206ENST00000452447 C17orf47Q8NEP4 570 aa11.84□□□□□ -0.51
CHD3-206ENST00000452447 CHTF18Q8WVB6 975 aa11.84□□□□□ -0.51
CHD3-206ENST00000452447 ADIPOR1Q96A54 375 aa11.84□□□□□ -0.51
CHD3-206ENST00000452447 KLHL29Q96CT2 875 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms