RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 C6orf132Q5T0Z8 1188 aa10.11□□□□□ -0.79
PKP4-206ENST00000452162 REEP3Q6NUK4 255 aa10.11□□□□□ -0.79
PKP4-206ENST00000452162 ARMC8Q8IUR7 673 aa10.11□□□□□ -0.79
PKP4-206ENST00000452162 FAM46DQ8NEK8 389 aa10.11□□□□□ -0.79
PKP4-206ENST00000452162 JPH3Q8WXH2 748 aaPredicted RBP10.11□□□□□ -0.79
PKP4-206ENST00000452162 CDC6Q99741 560 aa10.11□□□□□ -0.79
PKP4-206ENST00000452162 DUSP23Q9BVJ7 150 aa10.11□□□□□ -0.79
PKP4-206ENST00000452162 PRDM7Q9NQW5 492 aa10.11□□□□□ -0.79
PKP4-206ENST00000452162 GMPPBQ9Y5P6 360 aa10.11□□□□□ -0.79
PKP4-206ENST00000452162 COLEC10Q9Y6Z7 277 aa10.11□□□□□ -0.79
PKP4-206ENST00000452162 U3KQA8 63 aa10.11□□□□□ -0.79
PKP4-206ENST00000452162 TNFRSF11BO00300 401 aa10.1□□□□□ -0.79
PKP4-206ENST00000452162 KDM1AO60341 852 aa10.1□□□□□ -0.79
PKP4-206ENST00000452162 DNAJB5O75953 348 aa10.1□□□□□ -0.79
PKP4-206ENST00000452162 CHRM5P08912 532 aaPredicted RBP10.1□□□□□ -0.79
PKP4-206ENST00000452162 CMPK1P30085 196 aa10.1□□□□□ -0.79
PKP4-206ENST00000452162 ACTR1BP42025 376 aa10.1□□□□□ -0.79
PKP4-206ENST00000452162 XCR1P46094 333 aa10.1□□□□□ -0.79
PKP4-206ENST00000452162 ARFIP1P53367 373 aa10.1□□□□□ -0.79
PKP4-206ENST00000452162 ACTR1AP61163 376 aa10.1□□□□□ -0.79
PKP4-206ENST00000452162 SIM1P81133 766 aaPredicted RBP10.1□□□□□ -0.79
PKP4-206ENST00000452162 MAPK11Q15759 364 aa10.1□□□□□ -0.79
PKP4-206ENST00000452162 NDUFAF5Q5TEU4 345 aa10.1□□□□□ -0.79
PKP4-206ENST00000452162 KIAA1614Q5VZ46 1190 aa10.1□□□□□ -0.79
PKP4-206ENST00000452162 GTF2IRD2BQ6EKJ0 949 aa10.1□□□□□ -0.79
PKP4-206ENST00000452162 MRM1Q6IN84 353 aaKnown RBP10.1□□□□□ -0.79
PKP4-206ENST00000452162 TNFAIP8L2Q6P589 184 aaPredicted RBP10.1□□□□□ -0.79
PKP4-206ENST00000452162 ABHD17CQ6PCB6 329 aa10.1□□□□□ -0.79
PKP4-206ENST00000452162 C6orf120Q7Z4R8 191 aa10.1□□□□□ -0.79
PKP4-206ENST00000452162 ZNF605Q86T29 641 aa10.1□□□□□ -0.79
PKP4-206ENST00000452162 GTF2IRD2Q86UP8 949 aa10.1□□□□□ -0.79
PKP4-206ENST00000452162 CCDC71Q8IV32 467 aaPredicted RBP10.1□□□□□ -0.79
PKP4-206ENST00000452162 SLC35F3Q8IY50 421 aa10.1□□□□□ -0.79
PKP4-206ENST00000452162 MFSD9Q8NBP5 474 aa10.1□□□□□ -0.79
PKP4-206ENST00000452162 GIPC3Q8TF64 312 aa10.1□□□□□ -0.79
PKP4-206ENST00000452162 SLC38A5Q8WUX1 472 aa10.1□□□□□ -0.79
PKP4-206ENST00000452162 APOBEC4Q8WW27 367 aaKnown RBP10.1□□□□□ -0.79
PKP4-206ENST00000452162 MACROD1Q9BQ69 325 aa10.1□□□□□ -0.79
PKP4-206ENST00000452162 GSDMCQ9BYG8 508 aa10.1□□□□□ -0.79
PKP4-206ENST00000452162 SERHL2Q9H4I8 314 aa10.1□□□□□ -0.79
PKP4-206ENST00000452162 TOR4AQ9NXH8 423 aa10.1□□□□□ -0.79
PKP4-206ENST00000452162 OR6C2Q9NZP2 312 aa10.1□□□□□ -0.79
PKP4-206ENST00000452162 ZNF624Q9P2J8 865 aaPredicted RBP10.1□□□□□ -0.79
PKP4-206ENST00000452162 ASB4Q9Y574 426 aa10.1□□□□□ -0.79
PKP4-206ENST00000452162 PCDHGA4Q9Y5G9 962 aa10.1□□□□□ -0.79
PKP4-206ENST00000452162 NCOR2Q9Y618 2525 aa10.1□□□□□ -0.79
PKP4-206ENST00000452162 A6NCN8 305 aa10.1□□□□□ -0.79
PKP4-206ENST00000452162 TRIM64BA6NI03 449 aa10.1□□□□□ -0.79
PKP4-206ENST00000452162 H3BMQ9 156 aa10.1□□□□□ -0.79
PKP4-206ENST00000452162 ERI3O43414 337 aaKnown RBP10.1□□□□□ -0.79
PKP4-206ENST00000452162 TNFSF14O43557 240 aa10.1□□□□□ -0.79
PKP4-206ENST00000452162 TFPTP0C1Z6 253 aa10.1□□□□□ -0.79
PKP4-206ENST00000452162 ITGA2P17301 1181 aa10.1□□□□□ -0.79
PKP4-206ENST00000452162 CD247P20963 164 aa10.1□□□□□ -0.79
PKP4-206ENST00000452162 LIMS1P48059 325 aa10.1□□□□□ -0.79
PKP4-206ENST00000452162 SPIBQ01892 262 aa10.1□□□□□ -0.79
PKP4-206ENST00000452162 NPRL3Q12980 569 aa10.1□□□□□ -0.79
PKP4-206ENST00000452162 TOR1AIP1Q5JTV8 583 aa10.1□□□□□ -0.79
PKP4-206ENST00000452162 GPR107Q5VW38 600 aa10.1□□□□□ -0.79
PKP4-206ENST00000452162 DGLUCYQ7Z3D6 616 aa10.1□□□□□ -0.79
PKP4-206ENST00000452162 B3GNT8Q7Z7M8 397 aa10.1□□□□□ -0.79
PKP4-206ENST00000452162 GLRX5Q86SX6 157 aa10.1□□□□□ -0.79
PKP4-206ENST00000452162 SLCO6A1Q86UG4 719 aa10.1□□□□□ -0.79
PKP4-206ENST00000452162 AMIGO1Q86WK6 493 aa10.1□□□□□ -0.79
PKP4-206ENST00000452162 SDR16C5Q8N3Y7 309 aa10.1□□□□□ -0.79
PKP4-206ENST00000452162 FAM181AQ8N9Y4 354 aa10.1□□□□□ -0.79
PKP4-206ENST00000452162 SMYD1Q8NB12 490 aa10.1□□□□□ -0.79
PKP4-206ENST00000452162 OR2L5Q8NG80 312 aa10.1□□□□□ -0.79
PKP4-206ENST00000452162 COG8Q96MW5 612 aa10.1□□□□□ -0.79
PKP4-206ENST00000452162 AMDHD1Q96NU7 426 aa10.1□□□□□ -0.79
PKP4-206ENST00000452162 APOL4Q9BPW4 351 aa10.1□□□□□ -0.79
PKP4-206ENST00000452162 TWSG1Q9GZX9 223 aa10.1□□□□□ -0.79
PKP4-206ENST00000452162 GLIPR2Q9H4G4 154 aa10.1□□□□□ -0.79
PKP4-206ENST00000452162 ZNF451Q9Y4E5 1061 aa10.1□□□□□ -0.79
PKP4-206ENST00000452162 SNRNP200O75643 2136 aaKnown RBP10.09□□□□□ -0.79
PKP4-206ENST00000452162 B4DGG1 531 aa10.09□□□□□ -0.79
PKP4-206ENST00000452162 HMGN4O00479 90 aa10.09□□□□□ -0.79
PKP4-206ENST00000452162 ATE1O95260 518 aa10.09□□□□□ -0.79
PKP4-206ENST00000452162 ANGPTL1O95841 491 aa10.09□□□□□ -0.79
PKP4-206ENST00000452162 BCHEP06276 602 aa10.09□□□□□ -0.79
PKP4-206ENST00000452162 HIST1H1TP22492 207 aaPredicted RBP10.09□□□□□ -0.79
PKP4-206ENST00000452162 ATP5A1P25705 553 aaKnown RBP10.09□□□□□ -0.79
PKP4-206ENST00000452162 NDUFS1P28331 727 aa10.09□□□□□ -0.79
PKP4-206ENST00000452162 CCT3P49368 545 aaKnown RBP10.09□□□□□ -0.79
PKP4-206ENST00000452162 CDH12P55289 794 aa10.09□□□□□ -0.79
PKP4-206ENST00000452162 CXCR4P61073 352 aa10.09□□□□□ -0.79
PKP4-206ENST00000452162 PIGFQ07326 219 aa10.09□□□□□ -0.79
PKP4-206ENST00000452162 SLAMF1Q13291 335 aa10.09□□□□□ -0.79
PKP4-206ENST00000452162 TUBA3CQ13748 450 aa10.09□□□□□ -0.79
PKP4-206ENST00000452162 MAD2L1BPQ15013 274 aaPredicted RBP10.09□□□□□ -0.79
PKP4-206ENST00000452162 EXOC3L2Q2M3D2 409 aa10.09□□□□□ -0.79
PKP4-206ENST00000452162 SPDYE7PQ495Y7 208 aa10.09□□□□□ -0.79
PKP4-206ENST00000452162 CYP27C1Q4G0S4 372 aa10.09□□□□□ -0.79
PKP4-206ENST00000452162 CCDC157Q569K6 752 aa10.09□□□□□ -0.79
PKP4-206ENST00000452162 RPS26P11Q5JNZ5 115 aaPredicted RBP10.09□□□□□ -0.79
PKP4-206ENST00000452162 TSPYL5Q86VY4 417 aaPredicted RBP10.09□□□□□ -0.79
PKP4-206ENST00000452162 PAQR7Q86WK9 346 aa10.09□□□□□ -0.79
PKP4-206ENST00000452162 TBC1D19Q8N5T2 526 aa10.09□□□□□ -0.79
PKP4-206ENST00000452162 SLC5A8Q8N695 610 aa10.09□□□□□ -0.79
PKP4-206ENST00000452162 ACOT4Q8N9L9 421 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms