RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 RP1P56715 2156 aa13.37□□□□□ -0.27
USP39-207ENST00000450066 VLDLRP98155 873 aa13.37□□□□□ -0.27
USP39-207ENST00000450066 GNA13Q14344 377 aa13.37□□□□□ -0.27
USP39-207ENST00000450066 ZNF595Q8IYB9 648 aa13.37□□□□□ -0.27
USP39-207ENST00000450066 MVB12AQ96EY5 273 aa13.37□□□□□ -0.27
USP39-207ENST00000450066 GIMAP5Q96F15 307 aa13.37□□□□□ -0.27
USP39-207ENST00000450066 C16orf58Q96GQ5 468 aa13.37□□□□□ -0.27
USP39-207ENST00000450066 C7orf34Q96L11 122 aa13.37□□□□□ -0.27
USP39-207ENST00000450066 MS4A4EQ96PG1 132 aa13.37□□□□□ -0.27
USP39-207ENST00000450066 ACTRT3Q9BYD9 372 aa13.37□□□□□ -0.27
USP39-207ENST00000450066 CUTCQ9NTM9 273 aa13.37□□□□□ -0.27
USP39-207ENST00000450066 PDP2Q9P2J9 529 aa13.37□□□□□ -0.27
USP39-207ENST00000450066 RAB23Q9ULC3 237 aa13.37□□□□□ -0.27
USP39-207ENST00000450066 UNC13CQ8NB66 2214 aa13.37□□□□□ -0.27
USP39-207ENST00000450066 ADAMTS9Q9P2N4 1935 aa13.37□□□□□ -0.27
USP39-207ENST00000450066 A0A087WV62 115 aa13.36□□□□□ -0.27
USP39-207ENST00000450066 PRAMEF27A3QJZ7 478 aa13.36□□□□□ -0.27
USP39-207ENST00000450066 SLC28A2O43868 658 aa13.36□□□□□ -0.27
USP39-207ENST00000450066 BMP10O95393 424 aa13.36□□□□□ -0.27
USP39-207ENST00000450066 ANKRD34CP0C6C1 535 aa13.36□□□□□ -0.27
USP39-207ENST00000450066 SLC35E2P0CK97 266 aa13.36□□□□□ -0.27
USP39-207ENST00000450066 CKMT1AP12532 417 aa13.36□□□□□ -0.27
USP39-207ENST00000450066 SOX18P35713 384 aa13.36□□□□□ -0.27
USP39-207ENST00000450066 GCGRP47871 477 aa13.36□□□□□ -0.27
USP39-207ENST00000450066 MED21Q13503 144 aa13.36□□□□□ -0.27
USP39-207ENST00000450066 LPAL2Q16609 132 aa13.36□□□□□ -0.27
USP39-207ENST00000450066 ZNF574Q6ZN55 896 aaPredicted RBP13.36□□□□□ -0.27
USP39-207ENST00000450066 ZDHHC13Q8IUH4 622 aa13.36□□□□□ -0.27
USP39-207ENST00000450066 ARMC8Q8IUR7 673 aa13.36□□□□□ -0.27
USP39-207ENST00000450066 SLC44A2Q8IWA5 706 aaPredicted RBP13.36□□□□□ -0.27
USP39-207ENST00000450066 GPR135Q8IZ08 494 aa13.36□□□□□ -0.27
USP39-207ENST00000450066 SVOPLQ8N434 492 aa13.36□□□□□ -0.27
USP39-207ENST00000450066 OR1L3Q8NH93 324 aa13.36□□□□□ -0.27
USP39-207ENST00000450066 ZNF675Q8TD23 568 aa13.36□□□□□ -0.27
USP39-207ENST00000450066 PEX11GQ96HA9 241 aa13.36□□□□□ -0.27
USP39-207ENST00000450066 ZNF607Q96SK3 696 aa13.36□□□□□ -0.27
USP39-207ENST00000450066 DPYSL5Q9BPU6 564 aa13.36□□□□□ -0.27
USP39-207ENST00000450066 TREX2Q9BQ50 279 aaPredicted RBP13.36□□□□□ -0.27
USP39-207ENST00000450066 OSBPL11Q9BXB4 747 aa13.36□□□□□ -0.27
USP39-207ENST00000450066 ANKRA2Q9H9E1 313 aa13.36□□□□□ -0.27
USP39-207ENST00000450066 SERTAD3Q9UJW9 196 aa13.36□□□□□ -0.27
USP39-207ENST00000450066 ABCG2Q9UNQ0 655 aa13.36□□□□□ -0.27
USP39-207ENST00000450066 C19orf53Q9UNZ5 99 aaPredicted RBP13.36□□□□□ -0.27
USP39-207ENST00000450066 SPEGQ15772 3267 aa13.36□□□□□ -0.27
USP39-207ENST00000450066 A0A1W2PQM1 296 aa13.36□□□□□ -0.27
USP39-207ENST00000450066 G3V2T6 193 aa13.36□□□□□ -0.27
USP39-207ENST00000450066 hCG_2039718K7EN88 272 aa13.36□□□□□ -0.27
USP39-207ENST00000450066 CLDN4O14493 209 aa13.36□□□□□ -0.27
USP39-207ENST00000450066 EI24O14681 340 aa13.36□□□□□ -0.27
USP39-207ENST00000450066 PLOD3O60568 738 aa13.36□□□□□ -0.27
USP39-207ENST00000450066 CTNSO60931 367 aa13.36□□□□□ -0.27
USP39-207ENST00000450066 RPLP0P05388 317 aaKnown RBP13.36□□□□□ -0.27
USP39-207ENST00000450066 NR2F1P10589 423 aa13.36□□□□□ -0.27
USP39-207ENST00000450066 ITGA1P56199 1179 aa13.36□□□□□ -0.27
USP39-207ENST00000450066 CCL7P80098 99 aa13.36□□□□□ -0.27
USP39-207ENST00000450066 MAT1AQ00266 395 aaKnown RBP13.36□□□□□ -0.27
USP39-207ENST00000450066 SYPL1Q16563 259 aa13.36□□□□□ -0.27
USP39-207ENST00000450066 PROX2Q3B8N5 592 aa13.36□□□□□ -0.27
USP39-207ENST00000450066 IQCCQ4KMZ1 466 aa13.36□□□□□ -0.27
USP39-207ENST00000450066 IFI44LQ53G44 452 aa13.36□□□□□ -0.27
USP39-207ENST00000450066 RPS26P11Q5JNZ5 115 aaPredicted RBP13.36□□□□□ -0.27
USP39-207ENST00000450066 FHL5Q5TD97 284 aa13.36□□□□□ -0.27
USP39-207ENST00000450066 OR2T5Q6IEZ7 315 aa13.36□□□□□ -0.27
USP39-207ENST00000450066 FAM111BQ6SJ93 734 aa13.36□□□□□ -0.27
USP39-207ENST00000450066 TMPRSS9Q7Z410 1059 aa13.36□□□□□ -0.27
USP39-207ENST00000450066 OR4D9Q8NGE8 314 aa13.36□□□□□ -0.27
USP39-207ENST00000450066 OR2T29Q8NH02 315 aa13.36□□□□□ -0.27
USP39-207ENST00000450066 LOXL4Q96JB6 756 aa13.36□□□□□ -0.27
USP39-207ENST00000450066 OR7D2Q96RA2 312 aa13.36□□□□□ -0.27
USP39-207ENST00000450066 YIPF4Q9BSR8 244 aa13.36□□□□□ -0.27
USP39-207ENST00000450066 GTPBP2Q9BX10 602 aaKnown RBP13.36□□□□□ -0.27
USP39-207ENST00000450066 BCL2L10Q9HD36 194 aa13.36□□□□□ -0.27
USP39-207ENST00000450066 EQTNQ9NQ60 294 aa13.36□□□□□ -0.27
USP39-207ENST00000450066 ATXN7L1Q9ULK2 861 aaPredicted RBP13.36□□□□□ -0.27
USP39-207ENST00000450066 TMEM184BQ9Y519 407 aaPredicted RBP13.36□□□□□ -0.27
USP39-207ENST00000450066 AP4B1Q9Y6B7 739 aa13.36□□□□□ -0.27
USP39-207ENST00000450066 SPTBP11277 2137 aa13.36□□□□□ -0.27
USP39-207ENST00000450066 DUXAA6NLW8 204 aa13.35□□□□□ -0.27
USP39-207ENST00000450066 DPM1O60762 260 aa13.35□□□□□ -0.27
USP39-207ENST00000450066 NT5EP21589 574 aa13.35□□□□□ -0.27
USP39-207ENST00000450066 MPLP40238 635 aa13.35□□□□□ -0.27
USP39-207ENST00000450066 MAPK10P53779 464 aa13.35□□□□□ -0.27
USP39-207ENST00000450066 CRISP3P54108 245 aa13.35□□□□□ -0.27
USP39-207ENST00000450066 SLC13A2Q13183 592 aa13.35□□□□□ -0.27
USP39-207ENST00000450066 PRICKLE4Q2TBC4 344 aa13.35□□□□□ -0.27
USP39-207ENST00000450066 TRMT12Q53H54 448 aaKnown RBP13.35□□□□□ -0.27
USP39-207ENST00000450066 PRAMEF8Q5VWM4 474 aa13.35□□□□□ -0.27
USP39-207ENST00000450066 PRAMEF7Q5VXH5 474 aa13.35□□□□□ -0.27
USP39-207ENST00000450066 MFSD12Q6NUT3 480 aa13.35□□□□□ -0.27
USP39-207ENST00000450066 TTLL10Q6ZVT0 673 aa13.35□□□□□ -0.27
USP39-207ENST00000450066 ARHGAP22Q7Z5H3 698 aa13.35□□□□□ -0.27
USP39-207ENST00000450066 OR51Q1Q8NH59 317 aa13.35□□□□□ -0.27
USP39-207ENST00000450066 SPPL2AQ8TCT8 520 aa13.35□□□□□ -0.27
USP39-207ENST00000450066 SDCCAG3Q96C92 435 aa13.35□□□□□ -0.27
USP39-207ENST00000450066 ZNF501Q96CX3 271 aaPredicted RBP13.35□□□□□ -0.27
USP39-207ENST00000450066 NR1H4Q96RI1 486 aaPredicted RBP13.35□□□□□ -0.27
USP39-207ENST00000450066 RBCK1Q9BYM8 510 aa13.35□□□□□ -0.27
USP39-207ENST00000450066 LRRN3Q9H3W5 708 aa13.35□□□□□ -0.27
USP39-207ENST00000450066 FANCEQ9HB96 536 aa13.35□□□□□ -0.27
USP39-207ENST00000450066 FGF21Q9NSA1 209 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms