RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 VNN2O95498 520 aa5.33□□□□□ -1.56
CDC42BPA-209ENST00000448940 PORP16435 677 aaPredicted RBP5.33□□□□□ -1.56
CDC42BPA-209ENST00000448940 XRCC1P18887 633 aaPredicted RBP5.33□□□□□ -1.56
CDC42BPA-209ENST00000448940 KHKP50053 298 aa5.33□□□□□ -1.56
CDC42BPA-209ENST00000448940 PRDX1Q06830 199 aaKnown RBP5.33□□□□□ -1.56
CDC42BPA-209ENST00000448940 MZT1Q08AG7 82 aa5.33□□□□□ -1.56
CDC42BPA-209ENST00000448940 PLEKHN1Q494U1 663 aaPredicted RBP5.33□□□□□ -1.56
CDC42BPA-209ENST00000448940 JAZF1Q86VZ6 243 aa5.33□□□□□ -1.56
CDC42BPA-209ENST00000448940 C1orf52Q8N6N3 182 aaKnown RBP5.33□□□□□ -1.56
CDC42BPA-209ENST00000448940 OR9A4Q8NGU2 314 aa5.33□□□□□ -1.56
CDC42BPA-209ENST00000448940 RASSF5Q8WWW0 418 aa5.33□□□□□ -1.56
CDC42BPA-209ENST00000448940 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.33□□□□□ -1.56
CDC42BPA-209ENST00000448940 C1orf109Q9NX04 203 aa5.33□□□□□ -1.56
CDC42BPA-209ENST00000448940 DMGDHQ9UI17 866 aaKnown RBP5.33□□□□□ -1.56
CDC42BPA-209ENST00000448940 MTO1Q9Y2Z2 717 aaKnown RBP5.33□□□□□ -1.56
CDC42BPA-209ENST00000448940 NDUFAF1Q9Y375 327 aa5.33□□□□□ -1.56
CDC42BPA-209ENST00000448940 PCDHGA10Q9Y5H3 936 aa5.33□□□□□ -1.56
CDC42BPA-209ENST00000448940 PATJQ8NI35 1801 aa5.33□□□□□ -1.56
CDC42BPA-209ENST00000448940 SONP18583 2426 aaKnown RBP5.33□□□□□ -1.56
CDC42BPA-209ENST00000448940 B4E171 279 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 DSCR3O14972 297 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 CD3EP07766 207 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 LIFP15018 202 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 TSPAN7P41732 249 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 SOX8P57073 446 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 SLAMF1Q13291 335 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 VWA5B1Q5TIE3 1220 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 FAHD2BQ6P2I3 314 aaPredicted RBP5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 YTHDF3Q7Z739 585 aaKnown RBP5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 OR5K2Q8NHB8 316 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 STT3BQ8TCJ2 826 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 MVB12AQ96EY5 273 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 FAHD2AQ96GK7 314 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 APOPT1Q96IL0 206 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 VPS35Q96QK1 796 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 RANBP9Q96S59 729 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 POLE4Q9NR33 117 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 GHRLQ9UBU3 117 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 CHST10O43529 356 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 OR4F21O95013 312 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 SLC6A2P23975 617 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 TEAD1P28347 426 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 TAS2R41P59536 307 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 SCRN3Q0VDG4 424 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 TMEM53Q6P2H8 277 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 PLEKHM3Q6ZWE6 761 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 GALNTL5Q7Z4T8 443 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 CD163Q86VB7 1156 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 RANBP3LQ86VV4 465 aaPredicted RBP5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 CARFQ8N187 725 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 CT55Q8WUE5 264 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 SGCDQ92629 289 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 CMTM5Q96DZ9 223 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 NRBF2Q96F24 287 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 UBXN10Q96LJ8 280 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 BOCQ9BWV1 1114 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 TMEM185BQ9H7F4 350 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 TMEM74BQ9NUR3 256 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 CCDC168Q8NDH2 2452 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 DOCK5Q9H7D0 1870 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 A0A1W2PRB8 838 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 OTOL1A6NHN0 477 aaPredicted RBP5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 ATP6V1G1O75348 118 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 ACTL6BO94805 426 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 C9P02748 559 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 CEACAM5P06731 702 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 SMIM11AP58511 58 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 CBLBQ13191 982 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 NR1D2Q14995 579 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 GPR68Q15743 365 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 PDCD4Q53EL6 469 aaKnown RBP5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 RANBP10Q6VN20 620 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 CCDC80Q76M96 950 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 NANOGNBQ7Z5D8 188 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 RELL1Q8IUW5 271 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 CNTD1Q8N815 330 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 H1FXQ92522 213 aaKnown RBP5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 AGAP2Q99490 1192 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 SLC30A3Q99726 388 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 TCEAL2Q9H3H9 227 aaPredicted RBP5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 ZNF223Q9UK11 482 aaPredicted RBP5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 MAGED1Q9Y5V3 778 aaPredicted RBP5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 DLEC1Q9Y238 1755 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 GLOD5A6NK44 160 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 AIM2O14862 343 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 ZMPSTE24O75844 475 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 RPL14P50914 215 aaKnown RBP5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 ATP1A4Q13733 1029 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 EIPR1Q53HC9 387 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 MANEALQ5VSG8 457 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 CLEC9AQ6UXN8 241 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 OR56A1Q8NGH5 318 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 SETD6Q8TBK2 473 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 ARAP2Q8WZ64 1704 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 PIK3IP1Q96FE7 263 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 OR52E6Q96RD3 313 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 C1orf50Q9BV19 199 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 TMEM120AQ9BXJ8 343 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 LHX9Q9NQ69 397 aa5.32□□□□□ -1.56
CDC42BPA-209ENST00000448940 TCF7L2Q9NQB0 619 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms