RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 PMELP40967 661 aa10.22□□□□□ -0.77
LINC00342-202ENST00000448494 LHX1P48742 406 aa10.22□□□□□ -0.77
LINC00342-202ENST00000448494 TAS2R39P59534 338 aa10.22□□□□□ -0.77
LINC00342-202ENST00000448494 SREBF2Q12772 1141 aa10.22□□□□□ -0.77
LINC00342-202ENST00000448494 DHCR24Q15392 516 aa10.22□□□□□ -0.77
LINC00342-202ENST00000448494 TMEM255AQ5JRV8 349 aa10.22□□□□□ -0.77
LINC00342-202ENST00000448494 SLC35D3Q5M8T2 416 aa10.22□□□□□ -0.77
LINC00342-202ENST00000448494 GCNT6Q5T4J0 391 aa10.22□□□□□ -0.77
LINC00342-202ENST00000448494 ADGRF1Q5T601 910 aa10.22□□□□□ -0.77
LINC00342-202ENST00000448494 BAIAP2L2Q6UXY1 529 aa10.22□□□□□ -0.77
LINC00342-202ENST00000448494 TRIM46Q7Z4K8 759 aa10.22□□□□□ -0.77
LINC00342-202ENST00000448494 CMIPQ8IY22 773 aa10.22□□□□□ -0.77
LINC00342-202ENST00000448494 C15orf54Q8N8G6 183 aa10.22□□□□□ -0.77
LINC00342-202ENST00000448494 RASGEF1AQ8N9B8 481 aa10.22□□□□□ -0.77
LINC00342-202ENST00000448494 BEST4Q8NFU0 473 aa10.22□□□□□ -0.77
LINC00342-202ENST00000448494 PROKR1Q8TCW9 393 aa10.22□□□□□ -0.77
LINC00342-202ENST00000448494 OSTF1Q92882 214 aa10.22□□□□□ -0.77
LINC00342-202ENST00000448494 ZNF354BQ96LW1 612 aa10.22□□□□□ -0.77
LINC00342-202ENST00000448494 UBL7Q96S82 380 aaPredicted RBP10.22□□□□□ -0.77
LINC00342-202ENST00000448494 POLDIP3Q9BY77 421 aaKnown RBP10.22□□□□□ -0.77
LINC00342-202ENST00000448494 AP5M1Q9H0R1 490 aa10.22□□□□□ -0.77
LINC00342-202ENST00000448494 PRDM13Q9H4Q3 707 aa10.22□□□□□ -0.77
LINC00342-202ENST00000448494 STOX2Q9P2F5 926 aaPredicted RBP10.22□□□□□ -0.77
LINC00342-202ENST00000448494 BLOC1S5-TXNDC5H3BN57 136 aa10.21□□□□□ -0.77
LINC00342-202ENST00000448494 PRKYO43930 277 aa10.21□□□□□ -0.77
LINC00342-202ENST00000448494 FZD7O75084 574 aa10.21□□□□□ -0.77
LINC00342-202ENST00000448494 HIST1H1BP16401 226 aaKnown RBP10.21□□□□□ -0.77
LINC00342-202ENST00000448494 CNR1P21554 472 aa10.21□□□□□ -0.77
LINC00342-202ENST00000448494 AHCYP23526 432 aa10.21□□□□□ -0.77
LINC00342-202ENST00000448494 CDKN2CP42773 168 aa10.21□□□□□ -0.77
LINC00342-202ENST00000448494 CCR9P51686 369 aa10.21□□□□□ -0.77
LINC00342-202ENST00000448494 SEC61A1P61619 476 aaKnown RBP10.21□□□□□ -0.77
LINC00342-202ENST00000448494 TDGQ13569 410 aa10.21□□□□□ -0.77
LINC00342-202ENST00000448494 DOC2BQ14184 412 aa10.21□□□□□ -0.77
LINC00342-202ENST00000448494 PCID2Q5JVF3 399 aa10.21□□□□□ -0.77
LINC00342-202ENST00000448494 RNLSQ5VYX0 342 aa10.21□□□□□ -0.77
LINC00342-202ENST00000448494 MOB3CQ70IA8 216 aa10.21□□□□□ -0.77
LINC00342-202ENST00000448494 OTOP2Q7RTS6 562 aa10.21□□□□□ -0.77
LINC00342-202ENST00000448494 FJX1Q86VR8 437 aa10.21□□□□□ -0.77
LINC00342-202ENST00000448494 CCDC117Q8IWD4 279 aaPredicted RBP10.21□□□□□ -0.77
LINC00342-202ENST00000448494 SPICQ8N5J4 248 aa10.21□□□□□ -0.77
LINC00342-202ENST00000448494 FUBP3Q96I24 572 aaKnown RBP eCLIP10.21□□□□□ -0.77
LINC00342-202ENST00000448494 PGLYRP2Q96PD5 576 aa10.21□□□□□ -0.77
LINC00342-202ENST00000448494 KCNC2Q96PR1 638 aa10.21□□□□□ -0.77
LINC00342-202ENST00000448494 CCNL2Q96S94 520 aaPredicted RBP10.21□□□□□ -0.77
LINC00342-202ENST00000448494 THAP7Q9BT49 309 aaPredicted RBP10.21□□□□□ -0.77
LINC00342-202ENST00000448494 THUMPD3Q9BV44 507 aaKnown RBP10.21□□□□□ -0.77
LINC00342-202ENST00000448494 REEP1Q9H902 201 aa10.21□□□□□ -0.77
LINC00342-202ENST00000448494 GPATCH2LQ9NWQ4 482 aa10.21□□□□□ -0.77
LINC00342-202ENST00000448494 RASL12Q9NYN1 266 aa10.21□□□□□ -0.77
LINC00342-202ENST00000448494 KCNIP3Q9Y2W7 256 aa10.21□□□□□ -0.77
LINC00342-202ENST00000448494 PRKAB1Q9Y478 270 aa10.21□□□□□ -0.77
LINC00342-202ENST00000448494 A0A087X0M5 115 aa10.21□□□□□ -0.78
LINC00342-202ENST00000448494 IGKV6D-41A0A0C4DH26 115 aa10.21□□□□□ -0.78
LINC00342-202ENST00000448494 A0A1B0GX30 115 aa10.21□□□□□ -0.78
LINC00342-202ENST00000448494 KLRG2A4D1S0 409 aaPredicted RBP10.21□□□□□ -0.78
LINC00342-202ENST00000448494 LRIT2A6NDA9 550 aa10.21□□□□□ -0.78
LINC00342-202ENST00000448494 TMEM210A6NLX4 147 aa10.21□□□□□ -0.78
LINC00342-202ENST00000448494 SLC28A2O43868 658 aa10.21□□□□□ -0.78
LINC00342-202ENST00000448494 MPZL2O60487 215 aa10.21□□□□□ -0.78
LINC00342-202ENST00000448494 PRAF2O60831 178 aa10.21□□□□□ -0.78
LINC00342-202ENST00000448494 LILRB3O75022 631 aa10.21□□□□□ -0.78
LINC00342-202ENST00000448494 GUCA1CO95843 209 aa10.21□□□□□ -0.78
LINC00342-202ENST00000448494 PAX1P15863 534 aa10.21□□□□□ -0.78
LINC00342-202ENST00000448494 RCC1P18754 421 aaPredicted RBP10.21□□□□□ -0.78
LINC00342-202ENST00000448494 C5AR1P21730 350 aa10.21□□□□□ -0.78
LINC00342-202ENST00000448494 SLC6A4P31645 630 aa10.21□□□□□ -0.78
LINC00342-202ENST00000448494 BEX3Q00994 111 aa10.21□□□□□ -0.78
LINC00342-202ENST00000448494 MEF2AQ02078 507 aaPredicted RBP10.21□□□□□ -0.78
LINC00342-202ENST00000448494 BIKQ13323 160 aa10.21□□□□□ -0.78
LINC00342-202ENST00000448494 USP39Q53GS9 565 aaKnown RBP10.21□□□□□ -0.78
LINC00342-202ENST00000448494 ATG9BQ674R7 924 aa10.21□□□□□ -0.78
LINC00342-202ENST00000448494 MSANTD2Q6P1R3 559 aa10.21□□□□□ -0.78
LINC00342-202ENST00000448494 B3GNT9Q6UX72 402 aa10.21□□□□□ -0.78
LINC00342-202ENST00000448494 DEF8Q6ZN54 512 aa10.21□□□□□ -0.78
LINC00342-202ENST00000448494 MBOAT1Q6ZNC8 495 aa10.21□□□□□ -0.78
LINC00342-202ENST00000448494 KDELC2Q7Z4H8 507 aa10.21□□□□□ -0.78
LINC00342-202ENST00000448494 OR56B4Q8NH76 319 aa10.21□□□□□ -0.78
LINC00342-202ENST00000448494 ST7LQ8TDW4 575 aa10.21□□□□□ -0.78
LINC00342-202ENST00000448494 ROBO4Q8WZ75 1007 aa10.21□□□□□ -0.78
LINC00342-202ENST00000448494 R3HDM4Q96D70 268 aa10.21□□□□□ -0.78
LINC00342-202ENST00000448494 WDR18Q9BV38 432 aa10.21□□□□□ -0.78
LINC00342-202ENST00000448494 SNRNP25Q9BV90 132 aaKnown RBP10.21□□□□□ -0.78
LINC00342-202ENST00000448494 CFAP97Q9P2B7 532 aa10.21□□□□□ -0.78
LINC00342-202ENST00000448494 AGAP14A8MT82 685 aa10.2□□□□□ -0.78
LINC00342-202ENST00000448494 TSTD3H0UI37 97 aa10.2□□□□□ -0.78
LINC00342-202ENST00000448494 AP4M1O00189 453 aa10.2□□□□□ -0.78
LINC00342-202ENST00000448494 RFXAPO00287 272 aa10.2□□□□□ -0.78
LINC00342-202ENST00000448494 DCLK1O15075 740 aa10.2□□□□□ -0.78
LINC00342-202ENST00000448494 CSO75390 466 aaKnown RBP10.2□□□□□ -0.78
LINC00342-202ENST00000448494 KHDRBS3O75525 346 aaKnown RBP10.2□□□□□ -0.78
LINC00342-202ENST00000448494 GLP2RO95838 553 aa10.2□□□□□ -0.78
LINC00342-202ENST00000448494 FABP3P05413 133 aa10.2□□□□□ -0.78
LINC00342-202ENST00000448494 CYP19A1P11511 503 aaPredicted RBP10.2□□□□□ -0.78
LINC00342-202ENST00000448494 FOXA1P55317 472 aa10.2□□□□□ -0.78
LINC00342-202ENST00000448494 LIPKQ5VXJ0 399 aa10.2□□□□□ -0.78
LINC00342-202ENST00000448494 MEDAGQ5VYS4 303 aa10.2□□□□□ -0.78
LINC00342-202ENST00000448494 HEPHL1Q6MZM0 1159 aa10.2□□□□□ -0.78
LINC00342-202ENST00000448494 ZNF549Q6P9A3 640 aa10.2□□□□□ -0.78
LINC00342-202ENST00000448494 OR6K3Q8NGY3 331 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms