RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 RNF31Q96EP0 1072 aa13.98□□□□□ -0.17
SF1-211ENST00000448404 ZNF556Q9HAH1 456 aa13.98□□□□□ -0.17
SF1-211ENST00000448404 TRPV4Q9HBA0 871 aa13.98□□□□□ -0.17
SF1-211ENST00000448404 PRDM7Q9NQW5 492 aa13.98□□□□□ -0.17
SF1-211ENST00000448404 STARD5Q9NSY2 213 aa13.98□□□□□ -0.17
SF1-211ENST00000448404 CLEC2DQ9UHP7 191 aa13.98□□□□□ -0.17
SF1-211ENST00000448404 PSORS1C1Q9UIG5 152 aa13.98□□□□□ -0.17
SF1-211ENST00000448404 HCN4Q9Y3Q4 1203 aa13.98□□□□□ -0.17
SF1-211ENST00000448404 GABARAPO95166 117 aa13.97□□□□□ -0.17
SF1-211ENST00000448404 EIF2S1P05198 315 aaKnown RBP13.97□□□□□ -0.17
SF1-211ENST00000448404 ASGR2P07307 311 aa13.97□□□□□ -0.17
SF1-211ENST00000448404 DBTP11182 482 aaKnown RBP13.97□□□□□ -0.17
SF1-211ENST00000448404 ST13P50502 369 aaKnown RBP13.97□□□□□ -0.17
SF1-211ENST00000448404 RBBP4Q09028 425 aa13.97□□□□□ -0.17
SF1-211ENST00000448404 ATAT1Q5SQI0 421 aa13.97□□□□□ -0.17
SF1-211ENST00000448404 C6orf132Q5T0Z8 1188 aa13.97□□□□□ -0.17
SF1-211ENST00000448404 TMEM92Q6UXU6 159 aa13.97□□□□□ -0.17
SF1-211ENST00000448404 LCN9Q8WX39 176 aa13.97□□□□□ -0.17
SF1-211ENST00000448404 LGALS12Q96DT0 336 aa13.97□□□□□ -0.17
SF1-211ENST00000448404 GPC6Q9Y625 555 aaPredicted RBP13.97□□□□□ -0.17
SF1-211ENST00000448404 PRSS38A1L453 326 aa13.97□□□□□ -0.17
SF1-211ENST00000448404 WWP2O00308 870 aa13.97□□□□□ -0.17
SF1-211ENST00000448404 DNAJB5O75953 348 aa13.97□□□□□ -0.17
SF1-211ENST00000448404 CTSBP07858 339 aa13.97□□□□□ -0.17
SF1-211ENST00000448404 HIST1H1TP22492 207 aaPredicted RBP13.97□□□□□ -0.17
SF1-211ENST00000448404 CBLP22681 906 aa13.97□□□□□ -0.17
SF1-211ENST00000448404 CXCR2P25025 360 aa13.97□□□□□ -0.17
SF1-211ENST00000448404 ELAVL4P26378 380 aaKnown RBP13.97□□□□□ -0.17
SF1-211ENST00000448404 LIMS1P48059 325 aa13.97□□□□□ -0.17
SF1-211ENST00000448404 SIM1P81133 766 aaPredicted RBP13.97□□□□□ -0.17
SF1-211ENST00000448404 TARDBPQ13148 414 aaKnown RBP eCLIP13.97□□□□□ -0.171e-6■■□□□ 12.3
SF1-211ENST00000448404 MADCAM1Q13477 382 aa13.97□□□□□ -0.17
SF1-211ENST00000448404 TIGD6Q17RP2 521 aa13.97□□□□□ -0.17
SF1-211ENST00000448404 GPAT3Q53EU6 434 aa13.97□□□□□ -0.17
SF1-211ENST00000448404 TJAP1Q5JTD0 557 aa13.97□□□□□ -0.17
SF1-211ENST00000448404 SYT6Q5T7P8 510 aaPredicted RBP13.97□□□□□ -0.17
SF1-211ENST00000448404 ABHD17CQ6PCB6 329 aa13.97□□□□□ -0.17
SF1-211ENST00000448404 IKBIPQ70UQ0 350 aa13.97□□□□□ -0.17
SF1-211ENST00000448404 ZBED6CLQ96FA7 236 aaPredicted RBP13.97□□□□□ -0.17
SF1-211ENST00000448404 SH3YL1Q96HL8 342 aaPredicted RBP13.97□□□□□ -0.17
SF1-211ENST00000448404 SLC35G5Q96KT7 338 aa13.97□□□□□ -0.17
SF1-211ENST00000448404 CHCHD6Q9BRQ6 235 aa13.97□□□□□ -0.17
SF1-211ENST00000448404 SPATA9Q9BWV2 254 aa13.97□□□□□ -0.17
SF1-211ENST00000448404 BTBD2Q9BX70 525 aa13.97□□□□□ -0.17
SF1-211ENST00000448404 CAPN10Q9HC96 672 aa13.97□□□□□ -0.17
SF1-211ENST00000448404 THSD1Q9NS62 852 aa13.97□□□□□ -0.17
SF1-211ENST00000448404 ACSL5Q9ULC5 683 aa13.97□□□□□ -0.17
SF1-211ENST00000448404 SLC17A4Q9Y2C5 497 aa13.97□□□□□ -0.17
SF1-211ENST00000448404 MRPS2Q9Y399 296 aaKnown RBP13.97□□□□□ -0.17
SF1-211ENST00000448404 MAN2B1O00754 1011 aa13.96□□□□□ -0.17
SF1-211ENST00000448404 FCMRO60667 390 aa13.96□□□□□ -0.17
SF1-211ENST00000448404 ENTPD6O75354 484 aa13.96□□□□□ -0.17
SF1-211ENST00000448404 ADH1BP00325 375 aa13.96□□□□□ -0.17
SF1-211ENST00000448404 ATP5A1P25705 553 aaKnown RBP13.96□□□□□ -0.17
SF1-211ENST00000448404 NTSR1P30989 418 aa13.96□□□□□ -0.17
SF1-211ENST00000448404 ARHGAP19Q14CB8 494 aa13.96□□□□□ -0.17
SF1-211ENST00000448404 MED22Q15528 200 aa13.96□□□□□ -0.17
SF1-211ENST00000448404 MOGQ16653 247 aa13.96□□□□□ -0.17
SF1-211ENST00000448404 DEFB134Q4QY38 66 aa13.96□□□□□ -0.17
SF1-211ENST00000448404 ZNF770Q6IQ21 691 aaPredicted RBP13.96□□□□□ -0.17
SF1-211ENST00000448404 PTCHD4Q6ZW05 846 aa13.96□□□□□ -0.17
SF1-211ENST00000448404 PRSS48Q7RTY5 328 aa13.96□□□□□ -0.17
SF1-211ENST00000448404 VRK2Q86Y07 508 aa13.96□□□□□ -0.17
SF1-211ENST00000448404 STX19Q8N4C7 294 aa13.96□□□□□ -0.17
SF1-211ENST00000448404 MTERF3Q96E29 417 aa13.96□□□□□ -0.17
SF1-211ENST00000448404 SIPA1Q96FS4 1042 aa13.96□□□□□ -0.17
SF1-211ENST00000448404 CENPOQ9BU64 300 aa13.96□□□□□ -0.17
SF1-211ENST00000448404 DDX31Q9H8H2 851 aaKnown RBP13.96□□□□□ -0.17
SF1-211ENST00000448404 SACM1LQ9NTJ5 587 aa13.96□□□□□ -0.17
SF1-211ENST00000448404 CLDND1Q9NY35 253 aa13.96□□□□□ -0.17
SF1-211ENST00000448404 ASB4Q9Y574 426 aa13.96□□□□□ -0.17
SF1-211ENST00000448404 CENPVL1A0A0U1RR11 272 aa13.96□□□□□ -0.17
SF1-211ENST00000448404 P2RX6O15547 441 aa13.96□□□□□ -0.17
SF1-211ENST00000448404 PLRG1O43660 514 aaKnown RBP13.96□□□□□ -0.17
SF1-211ENST00000448404 SEMA3DO95025 777 aa13.96□□□□□ -0.17
SF1-211ENST00000448404 BMP4P12644 408 aa13.96□□□□□ -0.17
SF1-211ENST00000448404 GABRB1P18505 474 aa13.96□□□□□ -0.17
SF1-211ENST00000448404 POLR2CP19387 275 aaPredicted RBP13.96□□□□□ -0.17
SF1-211ENST00000448404 RPL3P39023 403 aaKnown RBP13.96□□□□□ -0.17
SF1-211ENST00000448404 SLC9A5Q14940 896 aa13.96□□□□□ -0.17
SF1-211ENST00000448404 NIPAL1Q6NVV3 410 aa13.96□□□□□ -0.17
SF1-211ENST00000448404 ZNF438Q7Z4V0 828 aa13.96□□□□□ -0.17
SF1-211ENST00000448404 CHPT1Q8WUD6 406 aa13.96□□□□□ -0.17
SF1-211ENST00000448404 Q96MT0 163 aa13.96□□□□□ -0.17
SF1-211ENST00000448404 SIGLEC11Q96RL6 698 aa13.96□□□□□ -0.17
SF1-211ENST00000448404 ZNF347Q96SE7 839 aa13.96□□□□□ -0.17
SF1-211ENST00000448404 LOC105369274A0A096LPK9 316 aa13.95□□□□□ -0.18
SF1-211ENST00000448404 LOC102723532A0A0G2JNH3 316 aa13.95□□□□□ -0.18
SF1-211ENST00000448404 SYNDIG1LA6NDD5 238 aa13.95□□□□□ -0.18
SF1-211ENST00000448404 CLCA1A8K7I4 914 aa13.95□□□□□ -0.18
SF1-211ENST00000448404 EFCAB9A8MZ26 197 aa13.95□□□□□ -0.18
SF1-211ENST00000448404 HCRTR1O43613 425 aa13.95□□□□□ -0.18
SF1-211ENST00000448404 HYAL3O43820 417 aaPredicted RBP13.95□□□□□ -0.18
SF1-211ENST00000448404 CTSVO60911 334 aa13.95□□□□□ -0.18
SF1-211ENST00000448404 ZNF888P0CJ79 500 aaPredicted RBP13.95□□□□□ -0.18
SF1-211ENST00000448404 ADORA3P0DMS8 318 aa13.95□□□□□ -0.18
SF1-211ENST00000448404 ANXA8P13928 327 aa13.95□□□□□ -0.18
SF1-211ENST00000448404 RHCEP18577 417 aa13.95□□□□□ -0.18
SF1-211ENST00000448404 TGM4P49221 684 aa13.95□□□□□ -0.18
SF1-211ENST00000448404 CLK1P49759 484 aaKnown RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms