RNA–Protein interactions for RNA: ENST00000446317.1

SF3A3P1-201, Transcript of splicing factor 3a, subunit 3 pseudogene 1, humanhuman

BASIC

Gene SF3A3P1, Length 1,477 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3P1-201ENST00000446317 CLPTM1LQ96KA5 538 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 ZNF578Q96N58 590 aaPredicted RBP7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 LMF1Q96S06 567 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 WDR77Q9BQA1 342 aaPredicted RBP7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 DPH2Q9BQC3 489 aaPredicted RBP7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 SLC35A5Q9BS91 424 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 TRIM4Q9C037 500 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 TGIF2Q9GZN2 237 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 PAIP1Q9H074 479 aaKnown RBP7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 IKZF5Q9H5V7 419 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 ZCCHC3Q9NUD5 404 aaKnown RBP7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 ATAD3AQ9NVI7 634 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 DDX18Q9NVP1 670 aaKnown RBP7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 SLC25A37Q9NYZ2 338 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 VAPAQ9P0L0 249 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 TAGLN3Q9UI15 199 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 PADI2Q9Y2J8 665 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 KCNE3Q9Y6H6 103 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 CLCA3PQ9Y6N3 262 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 IGHV1-45A0A0A0MS14 117 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 NSG1A0A0A6YYJ2 146 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 NPIPA5A0A0B4J1W7 369 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 PRSS51A0A1B0GVH4 220 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 A0A1W2PP18 115 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 GXYLT2A0PJZ3 443 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 B2RBV5 119 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 NPIPA7E9PJI5 369 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 WWP2O00308 870 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 UPK1AO00322 258 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 PDE5AO76074 875 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 DXOO77932 396 aaKnown RBP7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 DDAH2O95865 285 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 CBX7O95931 251 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 ALBP02768 609 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 CLPSP04118 112 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 IL6P05231 212 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 NUDT7P0C024 238 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 RAB40ALP0C0E4 278 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 SLC35E2P0CK97 266 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 NPIPA8P0DM63 369 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 ITGAMP11215 1152 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 COX6A1P12074 109 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 ETFAP13804 333 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 TCN1P20061 433 aaPredicted RBP7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 MPIP34949 423 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 CCT3P49368 545 aaKnown RBP7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 ARFIP1P53367 373 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 CORO7P57737 925 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 ART3Q13508 389 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 LASP1Q14847 261 aaKnown RBP7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 CCNJQ5T5M9 372 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 ANXA8L1Q5VT79 327 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 NIPAL1Q6NVV3 410 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 C19orf48Q6RUI8 117 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 MRGPREQ86SM8 312 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 IFNEQ86WN2 208 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 RNF130Q86XS8 419 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 SPACA3Q8IXA5 215 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 VWA5B2Q8N398 1253 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 NUP43Q8NFH3 380 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 OR11G2Q8NGC1 345 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 OR4N2Q8NGD1 307 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 OR8J2Q8NGG1 315 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 ADAMTS18Q8TE60 1221 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 ZCCHC14Q8WYQ9 949 aaKnown RBP7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 OR5P2Q8WZ92 322 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 PIK3R3Q92569 461 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 SLC9A6Q92581 669 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 ELP4Q96EB1 424 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 ARSGQ96EG1 525 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 FAM120BQ96EK7 910 aaKnown RBP7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 ZBED6CLQ96FA7 236 aaPredicted RBP7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 SENP5Q96HI0 755 aaPredicted RBP7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 METTL2AQ96IZ6 378 aaKnown RBP7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 SLC25A23Q9BV35 468 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 ITPAQ9BY32 194 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 SLC26A1Q9H2B4 701 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 SERHL2Q9H4I8 314 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 RMND5AQ9H871 391 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 WDR54Q9H977 334 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 CXorf21Q9HAI6 301 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 ENAMQ9NRM1 1142 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 P4HTMQ9NXG6 502 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 GIN1Q9NXP7 522 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 ANKRD10Q9NXR5 420 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 LEF1Q9UJU2 399 aaPredicted RBP7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 ZNF223Q9UK11 482 aaPredicted RBP7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 VPS4AQ9UN37 437 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 PCDHGB4Q9UN71 923 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 MMACHCQ9Y4U1 282 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 PCDHB14Q9Y5E9 798 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 NUP210LQ5VU65 1888 aa7.04□□□□□ -1.28
SF3A3P1-201ENST00000446317 ZFHX4Q86UP3 3567 aa7.03□□□□□ -1.28
SF3A3P1-201ENST00000446317 SAGE2PA6NJ88 616 aa7.03□□□□□ -1.28
SF3A3P1-201ENST00000446317 C21orf140B9A014 251 aa7.03□□□□□ -1.28
SF3A3P1-201ENST00000446317 TAF4O00268 1085 aa7.03□□□□□ -1.28
SF3A3P1-201ENST00000446317 RNASET2O00584 256 aaKnown RBP7.03□□□□□ -1.28
SF3A3P1-201ENST00000446317 GMFGO60234 142 aa7.03□□□□□ -1.28
SF3A3P1-201ENST00000446317 UNC5CO95185 931 aa7.03□□□□□ -1.28
SF3A3P1-201ENST00000446317 KCNH1O95259 989 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms