RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 RASD1Q9Y272 281 aa7.53□□□□□ -1.2
SMG1-202ENST00000446231 AGPAT2O15120 278 aa7.53□□□□□ -1.2
SMG1-202ENST00000446231 CDC123O75794 336 aaPredicted RBP7.53□□□□□ -1.2
SMG1-202ENST00000446231 RPP14O95059 124 aaKnown RBP7.53□□□□□ -1.2
SMG1-202ENST00000446231 SLC10A3P09131 477 aa7.53□□□□□ -1.2
SMG1-202ENST00000446231 CASTOR1Q8WTX7 329 aa7.53□□□□□ -1.2
SMG1-202ENST00000446231 BCL2L14Q9BZR8 327 aa7.53□□□□□ -1.2
SMG1-202ENST00000446231 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.53□□□□□ -1.2
SMG1-202ENST00000446231 PPP4R1LQ9P1A2 415 aa7.53□□□□□ -1.2
SMG1-202ENST00000446231 LEUTXA8MZ59 168 aa7.52□□□□□ -1.2
SMG1-202ENST00000446231 OSMP13725 252 aa7.52□□□□□ -1.2
SMG1-202ENST00000446231 GTF2F2P13984 249 aa7.52□□□□□ -1.2
SMG1-202ENST00000446231 VEGFCP49767 419 aa7.52□□□□□ -1.2
SMG1-202ENST00000446231 TMEM132BQ14DG7 1078 aa7.52□□□□□ -1.2
SMG1-202ENST00000446231 ANKRD34AQ69YU3 496 aa7.52□□□□□ -1.2
SMG1-202ENST00000446231 TMPRSS11BQ86T26 416 aa7.52□□□□□ -1.2
SMG1-202ENST00000446231 LAX1Q8IWV1 398 aa7.52□□□□□ -1.2
SMG1-202ENST00000446231 ZMIZ2Q8NF64 920 aa7.52□□□□□ -1.2
SMG1-202ENST00000446231 ADAMTS15Q8TE58 950 aa7.52□□□□□ -1.2
SMG1-202ENST00000446231 SAP130Q9H0E3 1048 aa7.52□□□□□ -1.2
SMG1-202ENST00000446231 MCCC2Q9HCC0 563 aa7.52□□□□□ -1.2
SMG1-202ENST00000446231 NDRG3Q9UGV2 375 aa7.52□□□□□ -1.2
SMG1-202ENST00000446231 TUBAL3A6NHL2 446 aa7.52□□□□□ -1.21
SMG1-202ENST00000446231 TSTD3H0UI37 97 aa7.52□□□□□ -1.21
SMG1-202ENST00000446231 VNN2O95498 520 aa7.52□□□□□ -1.21
SMG1-202ENST00000446231 ADAP00813 363 aa7.52□□□□□ -1.21
SMG1-202ENST00000446231 GUCA1AP43080 201 aaPredicted RBP7.52□□□□□ -1.21
SMG1-202ENST00000446231 SCNN1GP51170 649 aa7.52□□□□□ -1.21
SMG1-202ENST00000446231 PCBP2Q15366 365 aaKnown RBP eCLIP7.52□□□□□ -1.218e-8■■■■□ 23.7
SMG1-202ENST00000446231 SHFQ7M4L6 423 aa7.52□□□□□ -1.21
SMG1-202ENST00000446231 OR5T3Q8NGG3 340 aa7.52□□□□□ -1.21
SMG1-202ENST00000446231 FAM110BQ8TC76 370 aa7.52□□□□□ -1.21
SMG1-202ENST00000446231 PROKR1Q8TCW9 393 aa7.52□□□□□ -1.21
SMG1-202ENST00000446231 TMEM175Q9BSA9 504 aa7.52□□□□□ -1.21
SMG1-202ENST00000446231 MRPS30Q9NP92 439 aaKnown RBP7.52□□□□□ -1.21
SMG1-202ENST00000446231 AP1M2Q9Y6Q5 423 aa7.52□□□□□ -1.21
SMG1-202ENST00000446231 BCL9O00512 1426 aa7.52□□□□□ -1.21
SMG1-202ENST00000446231 ERAL1O75616 437 aaKnown RBP7.52□□□□□ -1.21
SMG1-202ENST00000446231 PRKXP51817 358 aa7.52□□□□□ -1.21
SMG1-202ENST00000446231 CHRNA6Q15825 494 aa7.52□□□□□ -1.21
SMG1-202ENST00000446231 ZNF772Q68DY9 489 aaPredicted RBP7.52□□□□□ -1.21
SMG1-202ENST00000446231 TCEAL6Q6IPX3 200 aa7.52□□□□□ -1.21
SMG1-202ENST00000446231 ARL14Q8N4G2 192 aa7.52□□□□□ -1.21
SMG1-202ENST00000446231 OR56A1Q8NGH5 318 aa7.52□□□□□ -1.21
SMG1-202ENST00000446231 COMMD4Q9H0A8 199 aa7.52□□□□□ -1.21
SMG1-202ENST00000446231 PRODHO43272 600 aa7.52□□□□□ -1.21
SMG1-202ENST00000446231 EDIL3O43854 480 aa7.52□□□□□ -1.21
SMG1-202ENST00000446231 KCNK2O95069 426 aa7.52□□□□□ -1.21
SMG1-202ENST00000446231 DAOAP59103 153 aa7.52□□□□□ -1.21
SMG1-202ENST00000446231 TEX37Q96LM6 180 aa7.52□□□□□ -1.21
SMG1-202ENST00000446231 ZNF582Q96NG8 517 aaPredicted RBP7.52□□□□□ -1.21
SMG1-202ENST00000446231 M0R129 80 aa7.52□□□□□ -1.21
SMG1-202ENST00000446231 CORO6Q6QEF8 472 aa7.52□□□□□ -1.21
SMG1-202ENST00000446231 ZFP82Q8N141 532 aa7.52□□□□□ -1.21
SMG1-202ENST00000446231 TRAV20A0A0B4J274 112 aa7.52□□□□□ -1.21
SMG1-202ENST00000446231 HCRTO43612 131 aa7.52□□□□□ -1.21
SMG1-202ENST00000446231 GIMD1P0DJR0 217 aa7.52□□□□□ -1.21
SMG1-202ENST00000446231 ZNF10P21506 573 aaPredicted RBP7.52□□□□□ -1.21
SMG1-202ENST00000446231 MEOX2P50222 304 aa7.52□□□□□ -1.21
SMG1-202ENST00000446231 CAV3P56539 151 aa7.52□□□□□ -1.21
SMG1-202ENST00000446231 PLK5Q496M5 336 aa7.52□□□□□ -1.21
SMG1-202ENST00000446231 C3orf33Q6P1S2 294 aa7.52□□□□□ -1.21
SMG1-202ENST00000446231 ATG5Q9H1Y0 275 aa7.52□□□□□ -1.21
SMG1-202ENST00000446231 RIPK3Q9Y572 518 aa7.52□□□□□ -1.21
SMG1-202ENST00000446231 ACOT7O00154 380 aa7.52□□□□□ -1.21
SMG1-202ENST00000446231 TBX18O95935 607 aa7.52□□□□□ -1.21
SMG1-202ENST00000446231 RANBP10Q6VN20 620 aa7.52□□□□□ -1.21
SMG1-202ENST00000446231 MBOAT1Q6ZNC8 495 aa7.52□□□□□ -1.21
SMG1-202ENST00000446231 ALG8Q9BVK2 526 aa7.52□□□□□ -1.21
SMG1-202ENST00000446231 RHBGQ9H310 441 aa7.52□□□□□ -1.21
SMG1-202ENST00000446231 MBTPS1Q14703 1052 aa7.52□□□□□ -1.21
SMG1-202ENST00000446231 DLEU7Q6UYE1 221 aa7.52□□□□□ -1.21
SMG1-202ENST00000446231 NLRC3Q7RTR2 1065 aa7.52□□□□□ -1.21
SMG1-202ENST00000446231 PRDM9Q9NQV7 894 aa7.52□□□□□ -1.21
SMG1-202ENST00000446231 RHPN2P1A8MT19 583 aa7.52□□□□□ -1.21
SMG1-202ENST00000446231 ADAM12O43184 909 aa7.52□□□□□ -1.21
SMG1-202ENST00000446231 ZBTB7AO95365 584 aa7.52□□□□□ -1.21
SMG1-202ENST00000446231 LRRC37A5PQ49AS3 106 aa7.52□□□□□ -1.21
SMG1-202ENST00000446231 SLC27A4Q6P1M0 643 aa7.52□□□□□ -1.21
SMG1-202ENST00000446231 TEX261Q6UWH6 196 aa7.52□□□□□ -1.21
SMG1-202ENST00000446231 PCED1BQ96HM7 432 aa7.52□□□□□ -1.21
SMG1-202ENST00000446231 U3KQ87 197 aa7.52□□□□□ -1.21
SMG1-202ENST00000446231 CD3GP09693 182 aa7.52□□□□□ -1.21
SMG1-202ENST00000446231 ZNF700Q9H0M5 742 aa7.52□□□□□ -1.21
SMG1-202ENST00000446231 NLGN3Q9NZ94 848 aa7.52□□□□□ -1.21
SMG1-202ENST00000446231 DLGAP4Q9Y2H0 992 aa7.52□□□□□ -1.21
SMG1-202ENST00000446231 CHP2O43745 196 aa7.52□□□□□ -1.21
SMG1-202ENST00000446231 ATG13O75143 517 aa7.52□□□□□ -1.21
SMG1-202ENST00000446231 INHAP05111 366 aa7.52□□□□□ -1.21
SMG1-202ENST00000446231 ZNF250P15622 560 aa7.52□□□□□ -1.21
SMG1-202ENST00000446231 DDX6P26196 483 aaKnown RBP eCLIP7.52□□□□□ -1.21
SMG1-202ENST00000446231 SSR2P43308 183 aa7.52□□□□□ -1.21
SMG1-202ENST00000446231 OR12D2P58182 307 aa7.52□□□□□ -1.21
SMG1-202ENST00000446231 SNRPD1P62314 119 aaKnown RBP7.52□□□□□ -1.21
SMG1-202ENST00000446231 TNFRSF17Q02223 184 aa7.52□□□□□ -1.21
SMG1-202ENST00000446231 CPOQ8IVL8 374 aa7.52□□□□□ -1.21
SMG1-202ENST00000446231 GPR26Q8NDV2 337 aa7.52□□□□□ -1.21
SMG1-202ENST00000446231 ACOT11Q8WXI4 607 aaPredicted RBP7.52□□□□□ -1.21
SMG1-202ENST00000446231 UBE2FQ969M7 185 aa7.52□□□□□ -1.21
SMG1-202ENST00000446231 OSGEPL1Q9H4B0 414 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms