RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 BCDIN3DQ7Z5W3 292 aaKnown RBP15.86■□□□□ 0.13
LAPTM4B-201ENST00000445593 SUN3Q8TAQ9 357 aa15.86■□□□□ 0.13
LAPTM4B-201ENST00000445593 COPS4Q9BT78 406 aa15.86■□□□□ 0.13
LAPTM4B-201ENST00000445593 RBCK1Q9BYM8 510 aa15.86■□□□□ 0.13
LAPTM4B-201ENST00000445593 KIR3DX1Q9H7L2 352 aa15.86■□□□□ 0.13
LAPTM4B-201ENST00000445593 MRPS2Q9Y399 296 aaKnown RBP15.86■□□□□ 0.13
LAPTM4B-201ENST00000445593 SEC16AO15027 2179 aa15.85■□□□□ 0.13
LAPTM4B-201ENST00000445593 SEMA4FO95754 770 aa15.85■□□□□ 0.13
LAPTM4B-201ENST00000445593 SH3BGRP55822 239 aaPredicted RBP15.85■□□□□ 0.13
LAPTM4B-201ENST00000445593 IL18R1Q13478 541 aa15.85■□□□□ 0.13
LAPTM4B-201ENST00000445593 POP5Q969H6 163 aaKnown RBP15.85■□□□□ 0.13
LAPTM4B-201ENST00000445593 MUL1Q969V5 352 aa15.85■□□□□ 0.13
LAPTM4B-201ENST00000445593 GPR174Q9BXC1 333 aa15.85■□□□□ 0.13
LAPTM4B-201ENST00000445593 P2RX2Q9UBL9 471 aa15.85■□□□□ 0.13
LAPTM4B-201ENST00000445593 PCDHGA2Q9Y5H1 932 aa15.85■□□□□ 0.13
LAPTM4B-201ENST00000445593 AP1M2Q9Y6Q5 423 aa15.85■□□□□ 0.13
LAPTM4B-201ENST00000445593 LRRC72A6NJI9 287 aa15.85■□□□□ 0.13
LAPTM4B-201ENST00000445593 BCAS1O75363 584 aaPredicted RBP15.85■□□□□ 0.13
LAPTM4B-201ENST00000445593 CHRM4P08173 479 aa15.85■□□□□ 0.13
LAPTM4B-201ENST00000445593 RFX3P48380 749 aa15.85■□□□□ 0.13
LAPTM4B-201ENST00000445593 TMED10P49755 219 aaKnown RBP15.85■□□□□ 0.13
LAPTM4B-201ENST00000445593 MLLT10P55197 1068 aa15.85■□□□□ 0.13
LAPTM4B-201ENST00000445593 TCTN3Q6NUS6 607 aa15.85■□□□□ 0.13
LAPTM4B-201ENST00000445593 TBC1D19Q8N5T2 526 aa15.85■□□□□ 0.13
LAPTM4B-201ENST00000445593 SMRP1Q8NCR6 262 aa15.85■□□□□ 0.13
LAPTM4B-201ENST00000445593 TTLQ8NG68 377 aa15.85■□□□□ 0.13
LAPTM4B-201ENST00000445593 SLC9A6Q92581 669 aa15.85■□□□□ 0.13
LAPTM4B-201ENST00000445593 TANKQ92844 425 aa15.85■□□□□ 0.13
LAPTM4B-201ENST00000445593 KLF15Q9UIH9 416 aa15.85■□□□□ 0.13
LAPTM4B-201ENST00000445593 HOXB6P17509 224 aaKnown RBP15.85■□□□□ 0.13
LAPTM4B-201ENST00000445593 TNNI3P19429 210 aa15.85■□□□□ 0.13
LAPTM4B-201ENST00000445593 GABARAPL2P60520 117 aa15.85■□□□□ 0.13
LAPTM4B-201ENST00000445593 IQCF1Q8N6M8 205 aa15.85■□□□□ 0.13
LAPTM4B-201ENST00000445593 RNF31Q96EP0 1072 aa15.85■□□□□ 0.13
LAPTM4B-201ENST00000445593 HRASLS5Q96KN8 279 aa15.85■□□□□ 0.13
LAPTM4B-201ENST00000445593 GAS2L1Q99501 681 aaPredicted RBP15.85■□□□□ 0.13
LAPTM4B-201ENST00000445593 HCN4Q9Y3Q4 1203 aa15.85■□□□□ 0.13
LAPTM4B-201ENST00000445593 FANCMQ8IYD8 2048 aa15.85■□□□□ 0.13
LAPTM4B-201ENST00000445593 SYNDIG1LA6NDD5 238 aa15.84■□□□□ 0.13
LAPTM4B-201ENST00000445593 STSP08842 583 aa15.84■□□□□ 0.13
LAPTM4B-201ENST00000445593 F3P13726 295 aa15.84■□□□□ 0.13
LAPTM4B-201ENST00000445593 UGT2B7P16662 529 aa15.84■□□□□ 0.13
LAPTM4B-201ENST00000445593 PPP2R1BP30154 601 aa15.84■□□□□ 0.13
LAPTM4B-201ENST00000445593 NCS1P62166 190 aa15.84■□□□□ 0.13
LAPTM4B-201ENST00000445593 ILF3Q12906 894 aaKnown RBP eCLIP15.84■□□□□ 0.13
LAPTM4B-201ENST00000445593 DCTN2Q13561 401 aaKnown RBP15.84■□□□□ 0.13
LAPTM4B-201ENST00000445593 PTGES3Q15185 160 aaKnown RBP15.84■□□□□ 0.13
LAPTM4B-201ENST00000445593 ZIC1Q15915 447 aa15.84■□□□□ 0.13
LAPTM4B-201ENST00000445593 FAAH2Q6GMR7 532 aa15.84■□□□□ 0.13
LAPTM4B-201ENST00000445593 SLC22A18ASQ8N1D0 253 aa15.84■□□□□ 0.13
LAPTM4B-201ENST00000445593 OR5T3Q8NGG3 340 aa15.84■□□□□ 0.13
LAPTM4B-201ENST00000445593 ZNF420Q8TAQ5 688 aaPredicted RBP15.84■□□□□ 0.13
LAPTM4B-201ENST00000445593 NDNFQ8TB73 568 aa15.84■□□□□ 0.13
LAPTM4B-201ENST00000445593 TBC1D20Q96BZ9 403 aa15.84■□□□□ 0.13
LAPTM4B-201ENST00000445593 TOE1Q96GM8 510 aaKnown RBP15.84■□□□□ 0.13
LAPTM4B-201ENST00000445593 TMCC3Q9ULS5 477 aa15.84■□□□□ 0.13
LAPTM4B-201ENST00000445593 ABCA7Q8IZY2 2146 aa15.84■□□□□ 0.13
LAPTM4B-201ENST00000445593 LDB3O75112 727 aa15.84■□□□□ 0.13
LAPTM4B-201ENST00000445593 DNAJB5O75953 348 aa15.84■□□□□ 0.13
LAPTM4B-201ENST00000445593 ANXA8P13928 327 aa15.84■□□□□ 0.13
LAPTM4B-201ENST00000445593 RHCEP18577 417 aa15.84■□□□□ 0.13
LAPTM4B-201ENST00000445593 DRD1P21728 446 aa15.84■□□□□ 0.13
LAPTM4B-201ENST00000445593 TAF8Q7Z7C8 310 aa15.84■□□□□ 0.13
LAPTM4B-201ENST00000445593 ASPGQ86U10 573 aa15.84■□□□□ 0.13
LAPTM4B-201ENST00000445593 ZNF607Q96SK3 696 aa15.84■□□□□ 0.13
LAPTM4B-201ENST00000445593 GDF15Q99988 308 aa15.84■□□□□ 0.13
LAPTM4B-201ENST00000445593 NT5DC2Q9H857 520 aa15.84■□□□□ 0.13
LAPTM4B-201ENST00000445593 THSD1Q9NS62 852 aa15.84■□□□□ 0.13
LAPTM4B-201ENST00000445593 OR6C2Q9NZP2 312 aa15.84■□□□□ 0.13
LAPTM4B-201ENST00000445593 SNX7Q9UNH6 387 aa15.84■□□□□ 0.13
LAPTM4B-201ENST00000445593 POFUT2Q9Y2G5 429 aa15.84■□□□□ 0.13
LAPTM4B-201ENST00000445593 CLDN24A6NM45 220 aa15.83■□□□□ 0.13
LAPTM4B-201ENST00000445593 OXSR1O95747 527 aaPredicted RBP15.83■□□□□ 0.13
LAPTM4B-201ENST00000445593 CSNK2A2P19784 350 aaPredicted RBP15.83■□□□□ 0.13
LAPTM4B-201ENST00000445593 CPN2P22792 545 aa15.83■□□□□ 0.13
LAPTM4B-201ENST00000445593 TEAD1P28347 426 aa15.83■□□□□ 0.13
LAPTM4B-201ENST00000445593 SERPINB1P30740 379 aa15.83■□□□□ 0.13
LAPTM4B-201ENST00000445593 CNR2P34972 360 aa15.83■□□□□ 0.13
LAPTM4B-201ENST00000445593 GGT2P36268 569 aa15.83■□□□□ 0.13
LAPTM4B-201ENST00000445593 KCNC4Q03721 635 aa15.83■□□□□ 0.13
LAPTM4B-201ENST00000445593 TARDBPQ13148 414 aaKnown RBP eCLIP15.83■□□□□ 0.135e-6■■■■□ 20
LAPTM4B-201ENST00000445593 TMEM35AQ53FP2 167 aa15.83■□□□□ 0.13
LAPTM4B-201ENST00000445593 FBXO42Q6P3S6 717 aa15.83■□□□□ 0.13
LAPTM4B-201ENST00000445593 SLC16A12Q6ZSM3 486 aa15.83■□□□□ 0.13
LAPTM4B-201ENST00000445593 ZNF605Q86T29 641 aa15.83■□□□□ 0.13
LAPTM4B-201ENST00000445593 FAM3CQ92520 227 aa15.83■□□□□ 0.13
LAPTM4B-201ENST00000445593 SLC7A5P2Q9GIP4 190 aa15.83■□□□□ 0.13
LAPTM4B-201ENST00000445593 A4GALTQ9NPC4 353 aa15.83■□□□□ 0.13
LAPTM4B-201ENST00000445593 MKLN1Q9UL63 735 aa15.83■□□□□ 0.13
LAPTM4B-201ENST00000445593 NTNG1Q9Y2I2 539 aa15.83■□□□□ 0.13
LAPTM4B-201ENST00000445593 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.83■□□□□ 0.12
LAPTM4B-201ENST00000445593 PRR19A6NJB7 356 aa15.83■□□□□ 0.12
LAPTM4B-201ENST00000445593 CTSBP07858 339 aa15.83■□□□□ 0.12
LAPTM4B-201ENST00000445593 SLC35G6P0C7Q6 338 aa15.83■□□□□ 0.12
LAPTM4B-201ENST00000445593 DRD2P14416 443 aa15.83■□□□□ 0.12
LAPTM4B-201ENST00000445593 AVPR1BP47901 424 aa15.83■□□□□ 0.12
LAPTM4B-201ENST00000445593 STXBP1P61764 594 aaKnown RBP15.83■□□□□ 0.12
LAPTM4B-201ENST00000445593 ABATP80404 500 aa15.83■□□□□ 0.12
LAPTM4B-201ENST00000445593 FUT5Q11128 374 aa15.83■□□□□ 0.12
LAPTM4B-201ENST00000445593 PROX2Q3B8N5 592 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms