RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 GPM6BQ13491 265 aa15.81■□□□□ 0.12
TCOF1-206ENST00000445265 POMZP3Q6PJE2 187 aa15.81■□□□□ 0.12
TCOF1-206ENST00000445265 OR10H5Q8NGA6 315 aa15.81■□□□□ 0.12
TCOF1-206ENST00000445265 OR8K5Q8NH50 307 aa15.81■□□□□ 0.12
TCOF1-206ENST00000445265 CHFRQ96EP1 664 aa15.81■□□□□ 0.12
TCOF1-206ENST00000445265 KLK4Q9Y5K2 254 aa15.81■□□□□ 0.12
TCOF1-206ENST00000445265 UNC119BA6NIH7 251 aa15.81■□□□□ 0.12
TCOF1-206ENST00000445265 PLD2O14939 933 aa15.81■□□□□ 0.12
TCOF1-206ENST00000445265 UBXN7O94888 489 aa15.81■□□□□ 0.12
TCOF1-206ENST00000445265 F11P03951 625 aa15.81■□□□□ 0.12
TCOF1-206ENST00000445265 PRR35P0CG20 571 aa15.81■□□□□ 0.12
TCOF1-206ENST00000445265 ENPP2Q13822 863 aa15.81■□□□□ 0.12
TCOF1-206ENST00000445265 PDZD3Q86UT5 571 aa15.81■□□□□ 0.12
TCOF1-206ENST00000445265 KLHDC8AQ8IYD2 350 aa15.81■□□□□ 0.12
TCOF1-206ENST00000445265 OR8H3Q8N146 312 aa15.81■□□□□ 0.12
TCOF1-206ENST00000445265 LRRC25Q8N386 305 aaPredicted RBP15.81■□□□□ 0.12
TCOF1-206ENST00000445265 RASGEF1AQ8N9B8 481 aa15.81■□□□□ 0.12
TCOF1-206ENST00000445265 GSDMCQ9BYG8 508 aa15.81■□□□□ 0.12
TCOF1-206ENST00000445265 IRF2BPLQ9H1B7 796 aa15.81■□□□□ 0.12
TCOF1-206ENST00000445265 Q9N2J8 555 aa15.81■□□□□ 0.12
TCOF1-206ENST00000445265 A0A1B0GTL3 188 aa15.8■□□□□ 0.12
TCOF1-206ENST00000445265 M0R3H8 397 aa15.8■□□□□ 0.12
TCOF1-206ENST00000445265 HMGA1P17096 107 aaKnown RBP15.8■□□□□ 0.12
TCOF1-206ENST00000445265 IMPA1P29218 277 aa15.8■□□□□ 0.12
TCOF1-206ENST00000445265 GRIN2CQ14957 1233 aa15.8■□□□□ 0.12
TCOF1-206ENST00000445265 Q6ZPB1 254 aaPredicted RBP15.8■□□□□ 0.12
TCOF1-206ENST00000445265 ASPGQ86U10 573 aa15.8■□□□□ 0.12
TCOF1-206ENST00000445265 METTL4Q8N3J2 472 aa15.8■□□□□ 0.12
TCOF1-206ENST00000445265 PARP16Q8N5Y8 322 aa15.8■□□□□ 0.12
TCOF1-206ENST00000445265 AKAP1Q92667 903 aaKnown RBP eCLIP15.8■□□□□ 0.12
TCOF1-206ENST00000445265 CREB3L1Q96BA8 519 aa15.8■□□□□ 0.12
TCOF1-206ENST00000445265 PITHD1Q9GZP4 211 aaPredicted RBP15.8■□□□□ 0.12
TCOF1-206ENST00000445265 GPR34Q9UPC5 381 aa15.8■□□□□ 0.12
TCOF1-206ENST00000445265 HTR3EA5X5Y0 456 aa15.8■□□□□ 0.12
TCOF1-206ENST00000445265 IGLON5A6NGN9 336 aa15.8■□□□□ 0.12
TCOF1-206ENST00000445265 CASC3O15234 703 aaKnown RBP15.8■□□□□ 0.12
TCOF1-206ENST00000445265 TSPAN12O95859 305 aa15.8■□□□□ 0.12
TCOF1-206ENST00000445265 RENP00797 406 aa15.8■□□□□ 0.12
TCOF1-206ENST00000445265 UGT2B10P36537 528 aa15.8■□□□□ 0.12
TCOF1-206ENST00000445265 PGDP52209 483 aa15.8■□□□□ 0.12
TCOF1-206ENST00000445265 WDR5P61964 334 aaKnown RBP15.8■□□□□ 0.12
TCOF1-206ENST00000445265 ACTC1P68032 377 aa15.8■□□□□ 0.12
TCOF1-206ENST00000445265 ACTA1P68133 377 aa15.8■□□□□ 0.12
TCOF1-206ENST00000445265 RPTNQ6XPR3 784 aa15.8■□□□□ 0.12
TCOF1-206ENST00000445265 KCT2Q8NC54 265 aa15.8■□□□□ 0.12
TCOF1-206ENST00000445265 ZSWIM3Q96MP5 696 aa15.8■□□□□ 0.12
TCOF1-206ENST00000445265 PAQR5Q9NXK6 330 aaPredicted RBP15.8■□□□□ 0.12
TCOF1-206ENST00000445265 SLC25A37Q9NYZ2 338 aa15.8■□□□□ 0.12
TCOF1-206ENST00000445265 SLC22A31A6NKX4 558 aa15.8■□□□□ 0.12
TCOF1-206ENST00000445265 PRODHO43272 600 aa15.8■□□□□ 0.12
TCOF1-206ENST00000445265 NDUFB5O43674 189 aa15.8■□□□□ 0.12
TCOF1-206ENST00000445265 ADORA3P0DMS8 318 aa15.8■□□□□ 0.12
TCOF1-206ENST00000445265 SOX3P41225 446 aa15.8■□□□□ 0.12
TCOF1-206ENST00000445265 RPS21P63220 83 aaKnown RBP15.8■□□□□ 0.12
TCOF1-206ENST00000445265 SLC35A2P78381 396 aa15.8■□□□□ 0.12
TCOF1-206ENST00000445265 AGAP7PQ5VUJ5 663 aa15.8■□□□□ 0.12
TCOF1-206ENST00000445265 ZNF676Q8N7Q3 588 aa15.8■□□□□ 0.12
TCOF1-206ENST00000445265 ANKK1Q8NFD2 765 aa15.8■□□□□ 0.12
TCOF1-206ENST00000445265 NUDT8Q8WV74 236 aa15.8■□□□□ 0.12
TCOF1-206ENST00000445265 HDHD5Q9BXW7 423 aa15.8■□□□□ 0.12
TCOF1-206ENST00000445265 TMEM184CQ9NVA4 438 aa15.8■□□□□ 0.12
TCOF1-206ENST00000445265 UPB1Q9UBR1 384 aa15.8■□□□□ 0.12
TCOF1-206ENST00000445265 STON1Q9Y6Q2 735 aa15.8■□□□□ 0.12
TCOF1-206ENST00000445265 CD1EP15812 388 aa15.8■□□□□ 0.12
TCOF1-206ENST00000445265 ITGB7P26010 798 aa15.8■□□□□ 0.12
TCOF1-206ENST00000445265 MINDY4Q4G0A6 757 aa15.8■□□□□ 0.12
TCOF1-206ENST00000445265 RFLNAQ6ZTI6 216 aa15.8■□□□□ 0.12
TCOF1-206ENST00000445265 KLBQ86Z14 1044 aa15.8■□□□□ 0.12
TCOF1-206ENST00000445265 SNX29P2Q8IUI4 249 aa15.8■□□□□ 0.12
TCOF1-206ENST00000445265 ENTHD1Q8IYW4 607 aa15.8■□□□□ 0.12
TCOF1-206ENST00000445265 PROKR2Q8NFJ6 384 aa15.8■□□□□ 0.12
TCOF1-206ENST00000445265 MBOAT4Q96T53 435 aa15.8■□□□□ 0.12
TCOF1-206ENST00000445265 ACTL8Q9H568 366 aa15.8■□□□□ 0.12
TCOF1-206ENST00000445265 ZNF224Q9NZL3 707 aa15.8■□□□□ 0.12
TCOF1-206ENST00000445265 NKX2-5P52952 324 aaPredicted RBP15.79■□□□□ 0.12
TCOF1-206ENST00000445265 POU6F2P78424 691 aaPredicted RBP15.79■□□□□ 0.12
TCOF1-206ENST00000445265 SLCO4C1Q6ZQN7 724 aa15.79■□□□□ 0.12
TCOF1-206ENST00000445265 SLC46A3Q7Z3Q1 461 aa15.79■□□□□ 0.12
TCOF1-206ENST00000445265 FAM217AQ8IXS0 508 aa15.79■□□□□ 0.12
TCOF1-206ENST00000445265 SIX5Q8N196 739 aa15.79■□□□□ 0.12
TCOF1-206ENST00000445265 ZNF431Q8TF32 576 aaPredicted RBP15.79■□□□□ 0.12
TCOF1-206ENST00000445265 OR2M4Q96R27 311 aa15.79■□□□□ 0.12
TCOF1-206ENST00000445265 ABLIM3O94929 683 aa15.79■□□□□ 0.12
TCOF1-206ENST00000445265 BLKP51451 505 aa15.79■□□□□ 0.12
TCOF1-206ENST00000445265 ADPRMQ3LIE5 342 aa15.79■□□□□ 0.12
TCOF1-206ENST00000445265 PARS2Q7L3T8 475 aaKnown RBP15.79■□□□□ 0.12
TCOF1-206ENST00000445265 SLC9B2Q86UD5 537 aa15.79■□□□□ 0.12
TCOF1-206ENST00000445265 VWA5B2Q8N398 1253 aa15.79■□□□□ 0.12
TCOF1-206ENST00000445265 RNF31Q96EP0 1072 aa15.79■□□□□ 0.12
TCOF1-206ENST00000445265 A3GALT2U3KPV4 340 aa15.79■□□□□ 0.12
TCOF1-206ENST00000445265 LRRN3E7EW58 273 aa15.79■□□□□ 0.12
TCOF1-206ENST00000445265 ANKRD28O15084 1053 aa15.79■□□□□ 0.12
TCOF1-206ENST00000445265 CHMP24386 653 aa15.79■□□□□ 0.12
TCOF1-206ENST00000445265 ERP29P30040 261 aaKnown RBP15.79■□□□□ 0.12
TCOF1-206ENST00000445265 UAP1L1Q3KQV9 507 aa15.79■□□□□ 0.12
TCOF1-206ENST00000445265 SLC39A5Q6ZMH5 540 aa15.79■□□□□ 0.12
TCOF1-206ENST00000445265 TMEM173Q86WV6 379 aaPredicted RBP15.79■□□□□ 0.12
TCOF1-206ENST00000445265 GHDCQ8N2G8 530 aa15.79■□□□□ 0.12
TCOF1-206ENST00000445265 ZFP41Q8N8Y5 198 aa15.79■□□□□ 0.12
TCOF1-206ENST00000445265 OR2A12Q8NGT7 310 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms