RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 KIRREL2Q6UWL6 708 aa16.06■□□□□ 0.16
LIME1-202ENST00000444951 CAMKMTQ7Z624 323 aa16.06■□□□□ 0.16
LIME1-202ENST00000444951 MRGPREQ86SM8 312 aa16.06■□□□□ 0.16
LIME1-202ENST00000444951 SUN3Q8TAQ9 357 aa16.06■□□□□ 0.16
LIME1-202ENST00000444951 SPDL1Q96EA4 605 aa16.06■□□□□ 0.16
LIME1-202ENST00000444951 ZBED6CLQ96FA7 236 aaPredicted RBP16.06■□□□□ 0.16
LIME1-202ENST00000444951 ZNF764Q96H86 408 aaPredicted RBP16.06■□□□□ 0.16
LIME1-202ENST00000444951 AMDHD1Q96NU7 426 aa16.06■□□□□ 0.16
LIME1-202ENST00000444951 LRRC37BQ96QE4 947 aa16.06■□□□□ 0.16
LIME1-202ENST00000444951 CNPPD1Q9BV87 410 aa16.06■□□□□ 0.16
LIME1-202ENST00000444951 ADAP2Q9NPF8 381 aa16.06■□□□□ 0.16
LIME1-202ENST00000444951 ANAPC2Q9UJX6 822 aa16.06■□□□□ 0.16
LIME1-202ENST00000444951 CLCA3PQ9Y6N3 262 aa16.06■□□□□ 0.16
LIME1-202ENST00000444951 MED13Q9UHV7 2174 aa16.06■□□□□ 0.16
LIME1-202ENST00000444951 CROCCQ5TZA2 2017 aa16.06■□□□□ 0.16
LIME1-202ENST00000444951 LOC100653049A0A140TA62 436 aa16.05■□□□□ 0.16
LIME1-202ENST00000444951 KRT34O76011 436 aa16.05■□□□□ 0.16
LIME1-202ENST00000444951 CYC1P08574 325 aa16.05■□□□□ 0.16
LIME1-202ENST00000444951 CT62P0C5K7 136 aa16.05■□□□□ 0.16
LIME1-202ENST00000444951 CAPN3P20807 821 aa16.05■□□□□ 0.16
LIME1-202ENST00000444951 WNT3P56703 355 aa16.05■□□□□ 0.16
LIME1-202ENST00000444951 MRPS35P82673 323 aaKnown RBP16.05■□□□□ 0.16
LIME1-202ENST00000444951 SRSF1Q07955 248 aaKnown RBP eCLIP16.05■□□□□ 0.16
LIME1-202ENST00000444951 RCAN2Q14206 197 aa16.05■□□□□ 0.16
LIME1-202ENST00000444951 ELAVL1Q15717 326 aaKnown RBP16.05■□□□□ 0.16
LIME1-202ENST00000444951 ANXA8L1Q5VT79 327 aa16.05■□□□□ 0.16
LIME1-202ENST00000444951 FAM111BQ6SJ93 734 aa16.05■□□□□ 0.16
LIME1-202ENST00000444951 TMEM107Q6UX40 140 aa16.05■□□□□ 0.16
LIME1-202ENST00000444951 SZRD1Q7Z422 152 aa16.05■□□□□ 0.16
LIME1-202ENST00000444951 SNX32Q86XE0 403 aa16.05■□□□□ 0.16
LIME1-202ENST00000444951 GALNT12Q8IXK2 581 aa16.05■□□□□ 0.16
LIME1-202ENST00000444951 POU5F2Q8N7G0 328 aa16.05■□□□□ 0.16
LIME1-202ENST00000444951 VPS37AQ8NEZ2 397 aa16.05■□□□□ 0.16
LIME1-202ENST00000444951 OR11G2Q8NGC1 345 aa16.05■□□□□ 0.16
LIME1-202ENST00000444951 OR8J2Q8NGG1 315 aa16.05■□□□□ 0.16
LIME1-202ENST00000444951 OR4A15Q8NGL6 344 aa16.05■□□□□ 0.16
LIME1-202ENST00000444951 ZFP28Q8NHY6 868 aa16.05■□□□□ 0.16
LIME1-202ENST00000444951 PTPMT1Q8WUK0 201 aaPredicted RBP16.05■□□□□ 0.16
LIME1-202ENST00000444951 ERP27Q96DN0 273 aa16.05■□□□□ 0.16
LIME1-202ENST00000444951 PELOQ9BRX2 385 aaKnown RBP16.05■□□□□ 0.16
LIME1-202ENST00000444951 CCDC106Q9BWC9 280 aa16.05■□□□□ 0.16
LIME1-202ENST00000444951 OR8D2Q9GZM6 311 aa16.05■□□□□ 0.16
LIME1-202ENST00000444951 MYLK2Q9H1R3 596 aa16.05■□□□□ 0.16
LIME1-202ENST00000444951 ZNF160Q9HCG1 818 aa16.05■□□□□ 0.16
LIME1-202ENST00000444951 P4HTMQ9NXG6 502 aa16.05■□□□□ 0.16
LIME1-202ENST00000444951 FBXL4Q9UKA2 621 aa16.05■□□□□ 0.16
LIME1-202ENST00000444951 SNX8Q9Y5X2 465 aa16.05■□□□□ 0.16
LIME1-202ENST00000444951 IGHV1-45A0A0A0MS14 117 aa16.04■□□□□ 0.16
LIME1-202ENST00000444951 NSG1A0A0A6YYJ2 146 aa16.04■□□□□ 0.16
LIME1-202ENST00000444951 PRSS51A0A1B0GVH4 220 aa16.04■□□□□ 0.16
LIME1-202ENST00000444951 HRKO00198 91 aa16.04■□□□□ 0.16
LIME1-202ENST00000444951 DYRK3O43781 588 aa16.04■□□□□ 0.16
LIME1-202ENST00000444951 DNAJB5O75953 348 aa16.04■□□□□ 0.16
LIME1-202ENST00000444951 PDGFAP04085 211 aa16.04■□□□□ 0.16
LIME1-202ENST00000444951 ATP1B1P05026 303 aa16.04■□□□□ 0.16
LIME1-202ENST00000444951 SNRPB2P08579 225 aaKnown RBP16.04■□□□□ 0.16
LIME1-202ENST00000444951 COX6A1P12074 109 aa16.04■□□□□ 0.16
LIME1-202ENST00000444951 SOAT1P35610 550 aa16.04■□□□□ 0.16
LIME1-202ENST00000444951 CDK9P50750 372 aaKnown RBP16.04■□□□□ 0.16
LIME1-202ENST00000444951 BIKQ13323 160 aa16.04■□□□□ 0.16
LIME1-202ENST00000444951 PCOLCEQ15113 449 aa16.04■□□□□ 0.16
LIME1-202ENST00000444951 MAPKAPK3Q16644 382 aa16.04■□□□□ 0.16
LIME1-202ENST00000444951 C6orf10Q5SRN2 563 aa16.04■□□□□ 0.16
LIME1-202ENST00000444951 SLC2A7Q6PXP3 512 aa16.04■□□□□ 0.16
LIME1-202ENST00000444951 DNAJC14Q6Y2X3 702 aaPredicted RBP16.04■□□□□ 0.16
LIME1-202ENST00000444951 TREML1Q86YW5 311 aa16.04■□□□□ 0.16
LIME1-202ENST00000444951 OR5P2Q8WZ92 322 aa16.04■□□□□ 0.16
LIME1-202ENST00000444951 LPAR4Q99677 370 aa16.04■□□□□ 0.16
LIME1-202ENST00000444951 INPP5KQ9BT40 448 aa16.04■□□□□ 0.16
LIME1-202ENST00000444951 ZNF700Q9H0M5 742 aa16.04■□□□□ 0.16
LIME1-202ENST00000444951 ANKRA2Q9H9E1 313 aa16.04■□□□□ 0.16
LIME1-202ENST00000444951 CXorf21Q9HAI6 301 aa16.04■□□□□ 0.16
LIME1-202ENST00000444951 ACSS1Q9NUB1 689 aaPredicted RBP16.04■□□□□ 0.16
LIME1-202ENST00000444951 MRGBPQ9NV56 204 aa16.04■□□□□ 0.16
LIME1-202ENST00000444951 FAM120CQ9NX05 1096 aaKnown RBP16.04■□□□□ 0.16
LIME1-202ENST00000444951 PCDHGB4Q9UN71 923 aa16.04■□□□□ 0.16
LIME1-202ENST00000444951 ERVK-19Q9WJR5 959 aa16.04■□□□□ 0.16
LIME1-202ENST00000444951 POLHQ9Y253 713 aa16.04■□□□□ 0.16
LIME1-202ENST00000444951 USP9XQ93008 2570 aaPredicted RBP16.03■□□□□ 0.16
LIME1-202ENST00000444951 LOC102723996A0A087X1L8 192 aa16.03■□□□□ 0.16
LIME1-202ENST00000444951 SAGE2PA6NJ88 616 aa16.03■□□□□ 0.16
LIME1-202ENST00000444951 RNASET2O00584 256 aaKnown RBP16.03■□□□□ 0.16
LIME1-202ENST00000444951 ANGPT2O15123 496 aa16.03■□□□□ 0.16
LIME1-202ENST00000444951 GSNP06396 782 aa16.03■□□□□ 0.16
LIME1-202ENST00000444951 MC3RP41968 323 aa16.03■□□□□ 0.16
LIME1-202ENST00000444951 EXOSC7Q15024 291 aaKnown RBP16.03■□□□□ 0.16
LIME1-202ENST00000444951 MAPRE2Q15555 327 aa16.03■□□□□ 0.16
LIME1-202ENST00000444951 CEBPEQ15744 281 aa16.03■□□□□ 0.16
LIME1-202ENST00000444951 PRICKLE4Q2TBC4 344 aa16.03■□□□□ 0.16
LIME1-202ENST00000444951 BTBD16Q32M84 506 aa16.03■□□□□ 0.16
LIME1-202ENST00000444951 SPDYE7PQ495Y7 208 aa16.03■□□□□ 0.16
LIME1-202ENST00000444951 NDUFAF7Q7L592 441 aa16.03■□□□□ 0.16
LIME1-202ENST00000444951 CLEC4FQ8N1N0 589 aa16.03■□□□□ 0.16
LIME1-202ENST00000444951 VWA5B2Q8N398 1253 aa16.03■□□□□ 0.16
LIME1-202ENST00000444951 NATD1Q8N6N6 113 aa16.03■□□□□ 0.16
LIME1-202ENST00000444951 ZNF321PQ8N8H1 164 aa16.03■□□□□ 0.16
LIME1-202ENST00000444951 C7orf57Q8NEG2 295 aa16.03■□□□□ 0.16
LIME1-202ENST00000444951 OR14A16Q8NHC5 309 aa16.03■□□□□ 0.16
LIME1-202ENST00000444951 ADAMTS17Q8TE56 1095 aa16.03■□□□□ 0.16
LIME1-202ENST00000444951 DAZLQ92904 295 aaKnown RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms