RNA–Protein interactions for RNA: ENST00000444867.1

SEMA3D-202, Transcript of semaphorin 3D, humanhuman

TSL 1 (best) BASIC

Gene SEMA3D, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-202ENST00000444867 IFI6P09912 130 aa17.74■□□□□ 0.43
SEMA3D-202ENST00000444867 ALPPL2P10696 532 aa17.74■□□□□ 0.43
SEMA3D-202ENST00000444867 TYRP1P17643 537 aa17.74■□□□□ 0.43
SEMA3D-202ENST00000444867 CDH3P22223 829 aa17.74■□□□□ 0.43
SEMA3D-202ENST00000444867 GSTT1P30711 240 aa17.74■□□□□ 0.43
SEMA3D-202ENST00000444867 PXNP49023 591 aaPredicted RBP17.74■□□□□ 0.43
SEMA3D-202ENST00000444867 MAZP56270 477 aaKnown RBP17.74■□□□□ 0.43
SEMA3D-202ENST00000444867 NUP107P57740 925 aa17.74■□□□□ 0.43
SEMA3D-202ENST00000444867 CXCR4P61073 352 aa17.74■□□□□ 0.43
SEMA3D-202ENST00000444867 RAPSNQ13702 412 aa17.74■□□□□ 0.43
SEMA3D-202ENST00000444867 MEP1AQ16819 746 aa17.74■□□□□ 0.43
SEMA3D-202ENST00000444867 CTU2Q2VPK5 515 aaKnown RBP17.74■□□□□ 0.43
SEMA3D-202ENST00000444867 ZBED5Q49AG3 693 aa17.74■□□□□ 0.43
SEMA3D-202ENST00000444867 GPR141Q7Z602 305 aa17.74■□□□□ 0.43
SEMA3D-202ENST00000444867 C17orf82Q86X59 251 aaPredicted RBP17.74■□□□□ 0.43
SEMA3D-202ENST00000444867 ZNF761Q86XN6 746 aaPredicted RBP17.74■□□□□ 0.43
SEMA3D-202ENST00000444867 C19orf47Q8N9M1 422 aaKnown RBP17.74■□□□□ 0.43
SEMA3D-202ENST00000444867 OR7D2Q96RA2 312 aa17.74■□□□□ 0.43
SEMA3D-202ENST00000444867 FEVQ99581 238 aa17.74■□□□□ 0.43
SEMA3D-202ENST00000444867 ACTRT3Q9BYD9 372 aa17.74■□□□□ 0.43
SEMA3D-202ENST00000444867 VCX3AQ9NNX9 186 aa17.74■□□□□ 0.43
SEMA3D-202ENST00000444867 PAPOLBQ9NRJ5 636 aaKnown RBP17.74■□□□□ 0.43
SEMA3D-202ENST00000444867 PTGFRNQ9P2B2 879 aa17.74■□□□□ 0.43
SEMA3D-202ENST00000444867 ENOPH1Q9UHY7 261 aa17.74■□□□□ 0.43
SEMA3D-202ENST00000444867 CEPT1Q9Y6K0 416 aa17.74■□□□□ 0.43
SEMA3D-202ENST00000444867 TP53BP1Q12888 1972 aaPredicted RBP17.73■□□□□ 0.43
SEMA3D-202ENST00000444867 A0A1W2PS29 197 aa17.73■□□□□ 0.43
SEMA3D-202ENST00000444867 DUXAA6NLW8 204 aa17.73■□□□□ 0.43
SEMA3D-202ENST00000444867 J3KTA2 159 aa17.73■□□□□ 0.43
SEMA3D-202ENST00000444867 GALR3O60755 368 aaPredicted RBP17.73■□□□□ 0.43
SEMA3D-202ENST00000444867 ABCB7O75027 752 aa17.73■□□□□ 0.43
SEMA3D-202ENST00000444867 SLITRK5O94991 958 aa17.73■□□□□ 0.43
SEMA3D-202ENST00000444867 CCNB2O95067 398 aa17.73■□□□□ 0.43
SEMA3D-202ENST00000444867 IL7RP16871 459 aa17.73■□□□□ 0.43
SEMA3D-202ENST00000444867 YAP1P46937 504 aaKnown RBP17.73■□□□□ 0.43
SEMA3D-202ENST00000444867 MAN2A2P49641 1150 aa17.73■□□□□ 0.43
SEMA3D-202ENST00000444867 VSX2P58304 361 aaPredicted RBP17.73■□□□□ 0.43
SEMA3D-202ENST00000444867 NXPH1P58417 271 aa17.73■□□□□ 0.43
SEMA3D-202ENST00000444867 HNRNPKP61978 463 aaKnown RBP eCLIP17.73■□□□□ 0.43
SEMA3D-202ENST00000444867 SNRPNP63162 240 aaKnown RBP17.73■□□□□ 0.43
SEMA3D-202ENST00000444867 IL5RAQ01344 420 aa17.73■□□□□ 0.43
SEMA3D-202ENST00000444867 CDK5R2Q13319 367 aa17.73■□□□□ 0.43
SEMA3D-202ENST00000444867 CYP27C1Q4G0S4 372 aa17.73■□□□□ 0.43
SEMA3D-202ENST00000444867 PHF10Q8WUB8 498 aaKnown RBP17.73■□□□□ 0.43
SEMA3D-202ENST00000444867 MS4A4EQ96PG1 132 aa17.73■□□□□ 0.43
SEMA3D-202ENST00000444867 CSF3RQ99062 836 aa17.73■□□□□ 0.43
SEMA3D-202ENST00000444867 TUBA1CQ9BQE3 449 aa17.73■□□□□ 0.43
SEMA3D-202ENST00000444867 TBC1D17Q9HA65 648 aa17.73■□□□□ 0.43
SEMA3D-202ENST00000444867 MRPS2Q9Y399 296 aaKnown RBP17.73■□□□□ 0.43
SEMA3D-202ENST00000444867 HCN4Q9Y3Q4 1203 aa17.73■□□□□ 0.43
SEMA3D-202ENST00000444867 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.72■□□□□ 0.43
SEMA3D-202ENST00000444867 CCDC160A6NGH7 325 aa17.72■□□□□ 0.43
SEMA3D-202ENST00000444867 CASC3O15234 703 aaKnown RBP17.72■□□□□ 0.43
SEMA3D-202ENST00000444867 CYP4B1P13584 511 aa17.72■□□□□ 0.43
SEMA3D-202ENST00000444867 CPMP14384 443 aa17.72■□□□□ 0.43
SEMA3D-202ENST00000444867 ST6GAL1P15907 406 aa17.72■□□□□ 0.43
SEMA3D-202ENST00000444867 PORP16435 677 aaPredicted RBP17.72■□□□□ 0.43
SEMA3D-202ENST00000444867 JUNBP17275 347 aaPredicted RBP17.72■□□□□ 0.43
SEMA3D-202ENST00000444867 EEF1B2P24534 225 aaKnown RBP17.72■□□□□ 0.43
SEMA3D-202ENST00000444867 SMIM11AP58511 58 aa17.72■□□□□ 0.43
SEMA3D-202ENST00000444867 PPP1CAP62136 330 aa17.72■□□□□ 0.43
SEMA3D-202ENST00000444867 COLEC12Q5KU26 742 aa17.72■□□□□ 0.43
SEMA3D-202ENST00000444867 ATAD3BQ5T9A4 648 aa17.72■□□□□ 0.43
SEMA3D-202ENST00000444867 NIPAL1Q6NVV3 410 aa17.72■□□□□ 0.43
SEMA3D-202ENST00000444867 SLC5A8Q8N695 610 aa17.72■□□□□ 0.43
SEMA3D-202ENST00000444867 GIMAP5Q96F15 307 aa17.72■□□□□ 0.43
SEMA3D-202ENST00000444867 HRASLS5Q96KN8 279 aa17.72■□□□□ 0.43
SEMA3D-202ENST00000444867 DHRS1Q96LJ7 313 aa17.72■□□□□ 0.43
SEMA3D-202ENST00000444867 HSPA12BQ96MM6 686 aa17.72■□□□□ 0.43
SEMA3D-202ENST00000444867 ZNF556Q9HAH1 456 aa17.72■□□□□ 0.43
SEMA3D-202ENST00000444867 IL21RQ9HBE5 538 aa17.72■□□□□ 0.43
SEMA3D-202ENST00000444867 GIN1Q9NXP7 522 aa17.72■□□□□ 0.43
SEMA3D-202ENST00000444867 PTTG2Q9NZH5 202 aa17.72■□□□□ 0.43
SEMA3D-202ENST00000444867 SLC1A7O00341 560 aa17.72■□□□□ 0.43
SEMA3D-202ENST00000444867 AQP9O43315 295 aa17.72■□□□□ 0.43
SEMA3D-202ENST00000444867 SRPX2O60687 465 aaPredicted RBP17.72■□□□□ 0.43
SEMA3D-202ENST00000444867 CPNE6O95741 557 aa17.72■□□□□ 0.43
SEMA3D-202ENST00000444867 PROS1P07225 676 aa17.72■□□□□ 0.43
SEMA3D-202ENST00000444867 CHRM4P08173 479 aa17.72■□□□□ 0.43
SEMA3D-202ENST00000444867 PTGER1P34995 402 aa17.72■□□□□ 0.43
SEMA3D-202ENST00000444867 CAPZBP47756 277 aa17.72■□□□□ 0.43
SEMA3D-202ENST00000444867 SIM1P81133 766 aaPredicted RBP17.72■□□□□ 0.43
SEMA3D-202ENST00000444867 FUT5Q11128 374 aa17.72■□□□□ 0.43
SEMA3D-202ENST00000444867 LTB4RQ15722 352 aa17.72■□□□□ 0.43
SEMA3D-202ENST00000444867 LAIR2Q6ISS4 152 aa17.72■□□□□ 0.43
SEMA3D-202ENST00000444867 KCTD8Q6ZWB6 473 aa17.72■□□□□ 0.43
SEMA3D-202ENST00000444867 ZNF438Q7Z4V0 828 aa17.72■□□□□ 0.43
SEMA3D-202ENST00000444867 TAGAPQ8N103 731 aa17.72■□□□□ 0.43
SEMA3D-202ENST00000444867 CA13Q8N1Q1 262 aa17.72■□□□□ 0.43
SEMA3D-202ENST00000444867 OR2L13Q8N349 312 aa17.72■□□□□ 0.43
SEMA3D-202ENST00000444867 OR52J3Q8NH60 311 aa17.72■□□□□ 0.43
SEMA3D-202ENST00000444867 C1orf216Q8TAB5 229 aa17.72■□□□□ 0.43
SEMA3D-202ENST00000444867 TANKQ92844 425 aa17.72■□□□□ 0.43
SEMA3D-202ENST00000444867 C16orf58Q96GQ5 468 aa17.72■□□□□ 0.43
SEMA3D-202ENST00000444867 TRNT1Q96Q11 434 aaKnown RBP17.72■□□□□ 0.43
SEMA3D-202ENST00000444867 ALPK1Q96QP1 1244 aa17.72■□□□□ 0.43
SEMA3D-202ENST00000444867 YIPF4Q9BSR8 244 aa17.72■□□□□ 0.43
SEMA3D-202ENST00000444867 PINK1Q9BXM7 581 aa17.72■□□□□ 0.43
SEMA3D-202ENST00000444867 MIR1-1HGQ9H1L0 117 aa17.72■□□□□ 0.43
SEMA3D-202ENST00000444867 SLC9A8Q9Y2E8 581 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms