RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 DTX3Q8N9I9 347 aa7.63□□□□□ -1.19
CCDC39-201ENST00000442201 OR10A6Q8NH74 314 aa7.63□□□□□ -1.19
CCDC39-201ENST00000442201 CIDECQ96AQ7 238 aaPredicted RBP7.63□□□□□ -1.19
CCDC39-201ENST00000442201 COG8Q96MW5 612 aa7.63□□□□□ -1.19
CCDC39-201ENST00000442201 TRIM15Q9C019 465 aa7.63□□□□□ -1.19
CCDC39-201ENST00000442201 IKZF5Q9H5V7 419 aa7.63□□□□□ -1.19
CCDC39-201ENST00000442201 PDE7BQ9NP56 450 aa7.63□□□□□ -1.19
CCDC39-201ENST00000442201 TAS2R9Q9NYW1 312 aa7.63□□□□□ -1.19
CCDC39-201ENST00000442201 TMEM9Q9P0T7 183 aa7.63□□□□□ -1.19
CCDC39-201ENST00000442201 ACTR3BQ9P1U1 418 aa7.63□□□□□ -1.19
CCDC39-201ENST00000442201 ZNF282Q9UDV7 671 aaPredicted RBP7.63□□□□□ -1.19
CCDC39-201ENST00000442201 ATG4BQ9Y4P1 393 aa7.63□□□□□ -1.19
CCDC39-201ENST00000442201 SNX13Q9Y5W8 968 aa7.63□□□□□ -1.19
CCDC39-201ENST00000442201 MUC3AQ02505 3323 aa7.63□□□□□ -1.19
CCDC39-201ENST00000442201 A0A1W2PR48 441 aa7.63□□□□□ -1.19
CCDC39-201ENST00000442201 C1orf226A1L170 272 aa7.63□□□□□ -1.19
CCDC39-201ENST00000442201 PDPK1O15530 556 aa7.63□□□□□ -1.19
CCDC39-201ENST00000442201 SIGLEC6O43699 453 aa7.63□□□□□ -1.19
CCDC39-201ENST00000442201 B3GALT2O43825 422 aa7.63□□□□□ -1.19
CCDC39-201ENST00000442201 H6PDO95479 791 aa7.63□□□□□ -1.19
CCDC39-201ENST00000442201 C6orf47O95873 294 aa7.63□□□□□ -1.19
CCDC39-201ENST00000442201 PPIBP23284 216 aaKnown RBP7.63□□□□□ -1.19
CCDC39-201ENST00000442201 TTKP33981 857 aa7.63□□□□□ -1.19
CCDC39-201ENST00000442201 HBA1P69905 142 aa7.63□□□□□ -1.19
CCDC39-201ENST00000442201 TARDBPQ13148 414 aaKnown RBP eCLIP7.63□□□□□ -1.19
CCDC39-201ENST00000442201 GK3PQ14409 553 aa7.63□□□□□ -1.19
CCDC39-201ENST00000442201 AASDHQ4L235 1098 aaPredicted RBP7.63□□□□□ -1.19
CCDC39-201ENST00000442201 FCRLBQ6BAA4 426 aa7.63□□□□□ -1.19
CCDC39-201ENST00000442201 USP53Q70EK8 1073 aa7.63□□□□□ -1.19
CCDC39-201ENST00000442201 PTRH1Q86Y79 214 aaKnown RBP7.63□□□□□ -1.19
CCDC39-201ENST00000442201 FAM109AQ8N4B1 249 aa7.63□□□□□ -1.19
CCDC39-201ENST00000442201 OR2T12Q8NG77 320 aa7.63□□□□□ -1.19
CCDC39-201ENST00000442201 GOT1L1Q8NHS2 421 aaPredicted RBP7.63□□□□□ -1.19
CCDC39-201ENST00000442201 PYDC1Q8WXC3 89 aa7.63□□□□□ -1.19
CCDC39-201ENST00000442201 CCDC74AQ96AQ1 378 aa7.63□□□□□ -1.19
CCDC39-201ENST00000442201 EXOSC8Q96B26 276 aaKnown RBP7.63□□□□□ -1.19
CCDC39-201ENST00000442201 FAM120BQ96EK7 910 aaKnown RBP7.63□□□□□ -1.19
CCDC39-201ENST00000442201 ZNF583Q96ND8 569 aa7.63□□□□□ -1.19
CCDC39-201ENST00000442201 OPALINQ96PE5 141 aa7.63□□□□□ -1.19
CCDC39-201ENST00000442201 ZNF347Q96SE7 839 aa7.63□□□□□ -1.19
CCDC39-201ENST00000442201 CHRNA10Q9GZZ6 450 aa7.63□□□□□ -1.19
CCDC39-201ENST00000442201 KAT8Q9H7Z6 458 aaKnown RBP7.63□□□□□ -1.19
CCDC39-201ENST00000442201 PHF11Q9UIL8 331 aa7.63□□□□□ -1.19
CCDC39-201ENST00000442201 PLCL2Q9UPR0 1127 aa7.63□□□□□ -1.19
CCDC39-201ENST00000442201 SLC22A7Q9Y694 548 aa7.63□□□□□ -1.19
CCDC39-201ENST00000442201 A0A0C4DFX4 3053 aa7.62□□□□□ -1.19
CCDC39-201ENST00000442201 IGHV5-51A0A0C4DH38 117 aa7.62□□□□□ -1.19
CCDC39-201ENST00000442201 MYOCOSA0A1B0GUC4 107 aa7.62□□□□□ -1.19
CCDC39-201ENST00000442201 CPED1A4D0V7 1026 aa7.62□□□□□ -1.19
CCDC39-201ENST00000442201 J3QRK9 145 aa7.62□□□□□ -1.19
CCDC39-201ENST00000442201 ERVH48-1M5A8F1 160 aa7.62□□□□□ -1.19
CCDC39-201ENST00000442201 SNPHO15079 494 aa7.62□□□□□ -1.19
CCDC39-201ENST00000442201 HCRTR1O43613 425 aa7.62□□□□□ -1.19
CCDC39-201ENST00000442201 AIFM1O95831 613 aa7.62□□□□□ -1.19
CCDC39-201ENST00000442201 PNLIPP16233 465 aa7.62□□□□□ -1.19
CCDC39-201ENST00000442201 ENGP17813 658 aa7.62□□□□□ -1.19
CCDC39-201ENST00000442201 CD247P20963 164 aa7.62□□□□□ -1.19
CCDC39-201ENST00000442201 BUD31P41223 144 aaPredicted RBP7.62□□□□□ -1.19
CCDC39-201ENST00000442201 NR4A2P43354 598 aa7.62□□□□□ -1.19
CCDC39-201ENST00000442201 ARL4DP49703 201 aa7.62□□□□□ -1.19
CCDC39-201ENST00000442201 ETV1P50549 477 aa7.62□□□□□ -1.19
CCDC39-201ENST00000442201 MRPS22P82650 360 aaKnown RBP7.62□□□□□ -1.19
CCDC39-201ENST00000442201 ITGADQ13349 1161 aa7.62□□□□□ -1.19
CCDC39-201ENST00000442201 LRRC36Q1X8D7 754 aa7.62□□□□□ -1.19
CCDC39-201ENST00000442201 CYP2R1Q6VVX0 501 aa7.62□□□□□ -1.19
CCDC39-201ENST00000442201 AKAP14Q86UN6 197 aa7.62□□□□□ -1.19
CCDC39-201ENST00000442201 LINC00518Q8N0U6 118 aa7.62□□□□□ -1.19
CCDC39-201ENST00000442201 FAM181AQ8N9Y4 354 aa7.62□□□□□ -1.19
CCDC39-201ENST00000442201 OR2I1PQ8NGU4 316 aa7.62□□□□□ -1.19
CCDC39-201ENST00000442201 OR5P2Q8WZ92 322 aa7.62□□□□□ -1.19
CCDC39-201ENST00000442201 ZBED6CLQ96FA7 236 aaPredicted RBP7.62□□□□□ -1.19
CCDC39-201ENST00000442201 LOXL4Q96JB6 756 aa7.62□□□□□ -1.19
CCDC39-201ENST00000442201 MAPKAP1Q9BPZ7 522 aa7.62□□□□□ -1.19
CCDC39-201ENST00000442201 GTPBP2Q9BX10 602 aaKnown RBP7.62□□□□□ -1.19
CCDC39-201ENST00000442201 TPT1P8Q9HAU6 139 aa7.62□□□□□ -1.19
CCDC39-201ENST00000442201 C5AR2Q9P296 337 aa7.62□□□□□ -1.19
CCDC39-201ENST00000442201 UTS2RQ9UKP6 389 aa7.62□□□□□ -1.19
CCDC39-201ENST00000442201 PCDHB3Q9Y5E6 796 aa7.62□□□□□ -1.19
CCDC39-201ENST00000442201 GOLGA4Q13439 2230 aaKnown RBP7.62□□□□□ -1.19
CCDC39-201ENST00000442201 CABIN1Q9Y6J0 2220 aa7.62□□□□□ -1.19
CCDC39-201ENST00000442201 ARPC2O15144 300 aa7.62□□□□□ -1.19
CCDC39-201ENST00000442201 PROM1O43490 865 aa7.62□□□□□ -1.19
CCDC39-201ENST00000442201 C9P02748 559 aa7.62□□□□□ -1.19
CCDC39-201ENST00000442201 IL1RNP18510 177 aa7.62□□□□□ -1.19
CCDC39-201ENST00000442201 CD1CP29017 333 aa7.62□□□□□ -1.19
CCDC39-201ENST00000442201 SOX11P35716 441 aa7.62□□□□□ -1.19
CCDC39-201ENST00000442201 MPLP40238 635 aa7.62□□□□□ -1.19
CCDC39-201ENST00000442201 SLC9A3P48764 834 aa7.62□□□□□ -1.19
CCDC39-201ENST00000442201 MANFP55145 182 aaKnown RBP7.62□□□□□ -1.19
CCDC39-201ENST00000442201 OR4D2P58180 307 aa7.62□□□□□ -1.19
CCDC39-201ENST00000442201 ABHD18Q0P651 414 aa7.62□□□□□ -1.19
CCDC39-201ENST00000442201 PRSS53Q2L4Q9 553 aa7.62□□□□□ -1.19
CCDC39-201ENST00000442201 INAVAQ3KP66 663 aa7.62□□□□□ -1.19
CCDC39-201ENST00000442201 LCN8Q6JVE9 175 aa7.62□□□□□ -1.19
CCDC39-201ENST00000442201 ZFP1Q6P2D0 407 aa7.62□□□□□ -1.19
CCDC39-201ENST00000442201 SPRED1Q7Z699 444 aa7.62□□□□□ -1.19
CCDC39-201ENST00000442201 CLIP4Q8N3C7 705 aa7.62□□□□□ -1.19
CCDC39-201ENST00000442201 EID2Q8N6I1 236 aa7.62□□□□□ -1.19
CCDC39-201ENST00000442201 ADCY4Q8NFM4 1077 aa7.62□□□□□ -1.19
CCDC39-201ENST00000442201 NAT6Q93015 286 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms