RNA–Protein interactions for RNA: ENST00000441141.5

VPS8-208, Transcript of VPS8, CORVET complex subunit, human

TSL 4

Gene VPS8, Length 549 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS8-208	ENST00000441141	CHDH	Q8NE62	594 aa	Predicted RBP	2.58	□□□□□ -2
VPS8-208	ENST00000441141	RHOXF1	Q8NHV9	184 aa		2.58	□□□□□ -2
VPS8-208	ENST00000441141	TBCK	Q8TEA7	893 aa		2.58	□□□□□ -2
VPS8-208	ENST00000441141	C1orf147	Q96MC9	270 aa	Predicted RBP	2.58	□□□□□ -2
VPS8-208	ENST00000441141	RUFY1	Q96T51	708 aa		2.58	□□□□□ -2
VPS8-208	ENST00000441141	FTHL17	Q9BXU8	183 aa		2.58	□□□□□ -2
VPS8-208	ENST00000441141	CXXC4	Q9H2H0	198 aa		2.58	□□□□□ -2
VPS8-208	ENST00000441141	THAP9	Q9H5L6	903 aa		2.58	□□□□□ -2
VPS8-208	ENST00000441141	FAM124B	Q9H5Z6	455 aa	Predicted RBP	2.58	□□□□□ -2
VPS8-208	ENST00000441141	KCNMB3	Q9NPA1	279 aa		2.58	□□□□□ -2
VPS8-208	ENST00000441141	COPS7A	Q9UBW8	275 aa		2.58	□□□□□ -2
VPS8-208	ENST00000441141	KCNN3	Q9UGI6	736 aa		2.58	□□□□□ -2
VPS8-208	ENST00000441141	FAM153A	Q9UHL3	310 aa		2.58	□□□□□ -2
VPS8-208	ENST00000441141	SLC6A5	Q9Y345	797 aa		2.58	□□□□□ -2
VPS8-208	ENST00000441141	STRAP	Q9Y3F4	350 aa	Known RBP	2.58	□□□□□ -2
VPS8-208	ENST00000441141	KIF7	Q2M1P5	1343 aa		2.58	□□□□□ -2
VPS8-208	ENST00000441141		A0A0A6YYD4	124 aa		2.57	□□□□□ -2
VPS8-208	ENST00000441141	SH3PXD2B	A1X283	911 aa		2.57	□□□□□ -2
VPS8-208	ENST00000441141	ZNF487	B1APH4	448 aa		2.57	□□□□□ -2
VPS8-208	ENST00000441141	TLR4	O00206	839 aa		2.57	□□□□□ -2
VPS8-208	ENST00000441141	CYB561D2	O14569	222 aa		2.57	□□□□□ -2
VPS8-208	ENST00000441141	EI24	O14681	340 aa		2.57	□□□□□ -2
VPS8-208	ENST00000441141	BCL2L11	O43521	198 aa		2.57	□□□□□ -2
VPS8-208	ENST00000441141	SSX5	O60225	188 aa		2.57	□□□□□ -2
VPS8-208	ENST00000441141	KBTBD11	O94819	623 aa		2.57	□□□□□ -2
VPS8-208	ENST00000441141	REC8	O95072	547 aa		2.57	□□□□□ -2
VPS8-208	ENST00000441141	SYNGR4	O95473	234 aa		2.57	□□□□□ -2
VPS8-208	ENST00000441141	SEMA4F	O95754	770 aa		2.57	□□□□□ -2
VPS8-208	ENST00000441141	REN	P00797	406 aa		2.57	□□□□□ -2
VPS8-208	ENST00000441141	MAGEA4	P43358	317 aa		2.57	□□□□□ -2
VPS8-208	ENST00000441141	PITPNB	P48739	271 aa		2.57	□□□□□ -2
VPS8-208	ENST00000441141	RPS4X	P62701	263 aa	Known RBP	2.57	□□□□□ -2
VPS8-208	ENST00000441141	IL9R	Q01113	521 aa		2.57	□□□□□ -2
VPS8-208	ENST00000441141	MSLN	Q13421	630 aa	Predicted RBP	2.57	□□□□□ -2
VPS8-208	ENST00000441141	LASP1	Q14847	261 aa	Known RBP	2.57	□□□□□ -2
VPS8-208	ENST00000441141	PCK2	Q16822	640 aa		2.57	□□□□□ -2
VPS8-208	ENST00000441141	HKDC1	Q2TB90	917 aa		2.57	□□□□□ -2
VPS8-208	ENST00000441141	CCDC40	Q4G0X9	1142 aa		2.57	□□□□□ -2
VPS8-208	ENST00000441141	UNC50	Q53HI1	259 aa		2.57	□□□□□ -2
VPS8-208	ENST00000441141	NHLRC3	Q5JS37	347 aa		2.57	□□□□□ -2
VPS8-208	ENST00000441141	TAF3	Q5VWG9	929 aa		2.57	□□□□□ -2
VPS8-208	ENST00000441141	PRAMEF7	Q5VXH5	474 aa		2.57	□□□□□ -2
VPS8-208	ENST00000441141	LEMD1	Q68G75	181 aa		2.57	□□□□□ -2
VPS8-208	ENST00000441141	SPINK14	Q6IE38	97 aa		2.57	□□□□□ -2
VPS8-208	ENST00000441141	APOOL	Q6UXV4	268 aa		2.57	□□□□□ -2
VPS8-208	ENST00000441141	STOX1	Q6ZVD7	989 aa		2.57	□□□□□ -2
VPS8-208	ENST00000441141	TAF8	Q7Z7C8	310 aa		2.57	□□□□□ -2
VPS8-208	ENST00000441141	VPS36	Q86VN1	386 aa		2.57	□□□□□ -2
VPS8-208	ENST00000441141	SLC22A16	Q86VW1	577 aa		2.57	□□□□□ -2
VPS8-208	ENST00000441141	GPD1L	Q8N335	351 aa		2.57	□□□□□ -2
VPS8-208	ENST00000441141	SFRP1	Q8N474	314 aa		2.57	□□□□□ -2
VPS8-208	ENST00000441141	ZNRF1	Q8ND25	227 aa		2.57	□□□□□ -2
VPS8-208	ENST00000441141	TMEM185A	Q8NFB2	350 aa		2.57	□□□□□ -2
VPS8-208	ENST00000441141	OR4F5	Q8NH21	305 aa		2.57	□□□□□ -2
VPS8-208	ENST00000441141	MGARP	Q8TDB4	240 aa		2.57	□□□□□ -2
VPS8-208	ENST00000441141	ITLN1	Q8WWA0	313 aa		2.57	□□□□□ -2
VPS8-208	ENST00000441141	TMEM37	Q8WXS4	190 aa		2.57	□□□□□ -2
VPS8-208	ENST00000441141	MRPL53	Q96EL3	112 aa	Known RBP	2.57	□□□□□ -2
VPS8-208	ENST00000441141	ZBED6CL	Q96FA7	236 aa	Predicted RBP	2.57	□□□□□ -2
VPS8-208	ENST00000441141	TSPAN18	Q96SJ8	248 aa		2.57	□□□□□ -2
VPS8-208	ENST00000441141	APOL2	Q9BQE5	337 aa		2.57	□□□□□ -2
VPS8-208	ENST00000441141	ATG10	Q9H0Y0	220 aa		2.57	□□□□□ -2
VPS8-208	ENST00000441141	ABCG8	Q9H221	673 aa		2.57	□□□□□ -2
VPS8-208	ENST00000441141	RNF41	Q9H4P4	317 aa	Predicted RBP	2.57	□□□□□ -2
VPS8-208	ENST00000441141	DBNDD1	Q9H9R9	158 aa		2.57	□□□□□ -2
VPS8-208	ENST00000441141	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	2.57	□□□□□ -2
VPS8-208	ENST00000441141	CLEC5A	Q9NY25	188 aa		2.57	□□□□□ -2
VPS8-208	ENST00000441141	TAS2R16	Q9NYV7	291 aa		2.57	□□□□□ -2
VPS8-208	ENST00000441141	RAI14	Q9P0K7	980 aa		2.57	□□□□□ -2
VPS8-208	ENST00000441141	ZNF346	Q9UL40	294 aa	Known RBP	2.57	□□□□□ -2
VPS8-208	ENST00000441141	EMCN	Q9ULC0	261 aa		2.57	□□□□□ -2
VPS8-208	ENST00000441141	CCPG1	Q9ULG6	757 aa		2.57	□□□□□ -2
VPS8-208	ENST00000441141	HCFC1	P51610	2035 aa		2.56	□□□□□ -2
VPS8-208	ENST00000441141		A0A1W2PNU3	283 aa	Predicted RBP	2.56	□□□□□ -2
VPS8-208	ENST00000441141	CCDC69	A6NI79	296 aa		2.56	□□□□□ -2
VPS8-208	ENST00000441141		K7ERI5	159 aa		2.56	□□□□□ -2
VPS8-208	ENST00000441141	LRRTM2	O43300	516 aa		2.56	□□□□□ -2
VPS8-208	ENST00000441141	HTATSF1	O43719	755 aa	Known RBP	2.56	□□□□□ -2
VPS8-208	ENST00000441141	VEGFD	O43915	354 aa		2.56	□□□□□ -2
VPS8-208	ENST00000441141	PRAMEF12	O95522	483 aa		2.56	□□□□□ -2
VPS8-208	ENST00000441141	MELTF	P08582	738 aa		2.56	□□□□□ -2
VPS8-208	ENST00000441141	CCDC159	P0C7I6	412 aa		2.56	□□□□□ -2
VPS8-208	ENST00000441141	GP9	P14770	177 aa		2.56	□□□□□ -2
VPS8-208	ENST00000441141	TMOD1	P28289	359 aa		2.56	□□□□□ -2
VPS8-208	ENST00000441141	CSRP3	P50461	194 aa		2.56	□□□□□ -2
VPS8-208	ENST00000441141	MFAP2	P55001	183 aa		2.56	□□□□□ -2
VPS8-208	ENST00000441141	SRP54	P61011	504 aa	Known RBP	2.56	□□□□□ -2
VPS8-208	ENST00000441141	PPIA	P62937	165 aa	Known RBP	2.56	□□□□□ -2
VPS8-208	ENST00000441141	NOP14	P78316	857 aa	Known RBP	2.56	□□□□□ -2
VPS8-208	ENST00000441141	NAAA	Q02083	359 aa		2.56	□□□□□ -2
VPS8-208	ENST00000441141	WASHC5	Q12768	1159 aa		2.56	□□□□□ -2
VPS8-208	ENST00000441141	PPP2R5C	Q13362	524 aa		2.56	□□□□□ -2
VPS8-208	ENST00000441141	CYLC2	Q14093	348 aa	Predicted RBP	2.56	□□□□□ -2
VPS8-208	ENST00000441141	BTG3	Q14201	252 aa	Predicted RBP	2.56	□□□□□ -2
VPS8-208	ENST00000441141	ABRAXAS2	Q15018	415 aa		2.56	□□□□□ -2
VPS8-208	ENST00000441141	CCL14	Q16627	93 aa		2.56	□□□□□ -2
VPS8-208	ENST00000441141	HFE	Q30201	348 aa		2.56	□□□□□ -2
VPS8-208	ENST00000441141	C14orf28	Q4W4Y0	310 aa		2.56	□□□□□ -2
VPS8-208	ENST00000441141	EIPR1	Q53HC9	387 aa		2.56	□□□□□ -2
VPS8-208	ENST00000441141	CMPK2	Q5EBM0	449 aa		2.56	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms