RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 HIST2H2AA3Q6FI13 130 aa4.5□□□□□ -1.69
EDEM3-203ENST00000439962 TUBA3EQ6PEY2 450 aa4.5□□□□□ -1.69
EDEM3-203ENST00000439962 TBPL2Q6SJ96 375 aa4.5□□□□□ -1.69
EDEM3-203ENST00000439962 THOC6Q86W42 341 aaKnown RBP4.5□□□□□ -1.69
EDEM3-203ENST00000439962 PLXDC1Q8IUK5 500 aa4.5□□□□□ -1.69
EDEM3-203ENST00000439962 ZDHHC21Q8IVQ6 265 aa4.5□□□□□ -1.69
EDEM3-203ENST00000439962 SHISA5Q8N114 240 aa4.5□□□□□ -1.69
EDEM3-203ENST00000439962 B4GALNT2Q8NHY0 566 aa4.5□□□□□ -1.69
EDEM3-203ENST00000439962 NR4A3Q92570 626 aa4.5□□□□□ -1.69
EDEM3-203ENST00000439962 CLIP3Q96DZ5 547 aa4.5□□□□□ -1.69
EDEM3-203ENST00000439962 THAP11Q96EK4 314 aa4.5□□□□□ -1.69
EDEM3-203ENST00000439962 NODALQ96S42 347 aa4.5□□□□□ -1.69
EDEM3-203ENST00000439962 ARHGAP9Q9BRR9 750 aa4.5□□□□□ -1.69
EDEM3-203ENST00000439962 SGPP1Q9BX95 441 aa4.5□□□□□ -1.69
EDEM3-203ENST00000439962 PCBD2Q9H0N5 130 aa4.5□□□□□ -1.69
EDEM3-203ENST00000439962 SIAEQ9HAT2 523 aa4.5□□□□□ -1.69
EDEM3-203ENST00000439962 IL17BQ9UHF5 180 aa4.5□□□□□ -1.69
EDEM3-203ENST00000439962 TMEFF2Q9UIK5 374 aaPredicted RBP4.5□□□□□ -1.69
EDEM3-203ENST00000439962 NDRG4Q9ULP0 352 aaKnown RBP4.5□□□□□ -1.69
EDEM3-203ENST00000439962 FAF1Q9UNN5 650 aaPredicted RBP4.5□□□□□ -1.69
EDEM3-203ENST00000439962 PCDHGB3Q9Y5G1 929 aa4.5□□□□□ -1.69
EDEM3-203ENST00000439962 KCNE2Q9Y6J6 123 aa4.5□□□□□ -1.69
EDEM3-203ENST00000439962 CCDC187A0A096LP49 1063 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 KIR2DS5A0A0G2JLQ3 304 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 A0A0G2JNG1 304 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 A6NCN8 305 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 OR2W5A6NFC9 320 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 ZNF99A8MXY4 864 aaPredicted RBP4.49□□□□□ -1.69
EDEM3-203ENST00000439962 KIR2DS3K7RE56 304 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 TPST1O60507 370 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 KCNJ13O60928 360 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 ALOX12BO75342 701 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 CLPXO76031 633 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 BCL10O95999 233 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 RPN2P04844 631 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 GP1BAP07359 652 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 PCMT1P22061 227 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 IGFBP5P24593 272 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 TIA1P31483 386 aaKnown RBP eCLIP4.49□□□□□ -1.69
EDEM3-203ENST00000439962 LSSP48449 732 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 TPD52P55327 224 aaPredicted RBP4.49□□□□□ -1.69
EDEM3-203ENST00000439962 WNT3P56703 355 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 TRA2BP62995 288 aaKnown RBP4.49□□□□□ -1.69
EDEM3-203ENST00000439962 TUBA1BP68363 451 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 KCNC4Q03721 635 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 ACSM2AQ08AH3 577 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 CHIT1Q13231 466 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 KCNAB2Q13303 367 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 ZNF846Q147U1 533 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 KIR2DS5Q14953 304 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 UGT8Q16880 541 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 ZNF630Q2M218 657 aaPredicted RBP4.49□□□□□ -1.69
EDEM3-203ENST00000439962 ACSM2BQ68CK6 577 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 FAAH2Q6GMR7 532 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 PWWP2BQ6NUJ5 590 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 TMEM214Q6NUQ4 689 aaKnown RBP4.49□□□□□ -1.69
EDEM3-203ENST00000439962 MED27Q6P2C8 311 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 TMEM71Q6P5X7 295 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 OGFOD3Q6PK18 319 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 SCIMPQ6UWF3 145 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 CCDC81Q6ZN84 652 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 TUBA1AQ71U36 451 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 AMIGO1Q86WK6 493 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 SLITRK4Q8IW52 837 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 DEPDC4Q8N2C3 294 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 PARP8Q8N3A8 854 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 C11orf65Q8NCR3 313 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 C9orf43Q8TAL5 461 aaPredicted RBP4.49□□□□□ -1.69
EDEM3-203ENST00000439962 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.49□□□□□ -1.695e-10■■■■■ 30.9
EDEM3-203ENST00000439962 TBC1D15Q8TC07 691 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 FKBP10Q96AY3 582 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 SIGLEC11Q96RL6 698 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 MESP1Q9BRJ9 268 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 DUSP26Q9BV47 211 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 TMEM121BQ9BXQ6 578 aaPredicted RBP4.49□□□□□ -1.69
EDEM3-203ENST00000439962 REEP1Q9H902 201 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 PELI2Q9HAT8 420 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 FAM60AQ9NP50 221 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 FBXO8Q9NRD0 319 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 FGF21Q9NSA1 209 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 SPATA7Q9P0W8 599 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 GMPR2Q9P2T1 348 aaKnown RBP4.49□□□□□ -1.69
EDEM3-203ENST00000439962 ADAM29Q9UKF5 820 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 COLEC10Q9Y6Z7 277 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 TENM4Q6N022 2769 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 PIPSLA2A3N6 862 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 NTN3O00634 580 aaPredicted RBP4.49□□□□□ -1.69
EDEM3-203ENST00000439962 E2F6O75461 281 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 STK17BO94768 372 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 KRT75O95678 551 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 ALOX5P09917 674 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 ERGP11308 486 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 TCN2P20062 427 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 CXCR2P25025 360 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 SHMT2P34897 504 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 MLLT3P42568 568 aaPredicted RBP4.49□□□□□ -1.69
EDEM3-203ENST00000439962 CAPZBP47756 277 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 FASLGP48023 281 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 HMGA2P52926 109 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 PCBP4P57723 403 aaKnown RBP4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms