RNA–Protein interactions for RNA: ENST00000439886.5

SMPD4-209, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-209ENST00000439886 SOX18P35713 384 aa11.11□□□□□ -0.63
SMPD4-209ENST00000439886 CRYZQ08257 329 aaKnown RBP11.11□□□□□ -0.63
SMPD4-209ENST00000439886 CRB2Q5IJ48 1285 aa11.11□□□□□ -0.63
SMPD4-209ENST00000439886 ZBTB37Q5TC79 503 aa11.11□□□□□ -0.63
SMPD4-209ENST00000439886 ANXA8L1Q5VT79 327 aa11.11□□□□□ -0.63
SMPD4-209ENST00000439886 CYB5R2Q6BCY4 276 aa11.11□□□□□ -0.63
SMPD4-209ENST00000439886 MZT2AQ6P582 158 aa11.11□□□□□ -0.63
SMPD4-209ENST00000439886 SERPINA13PQ6UXR4 307 aa11.11□□□□□ -0.63
SMPD4-209ENST00000439886 SAMD12Q8N8I0 201 aa11.11□□□□□ -0.63
SMPD4-209ENST00000439886 OR4M2Q8NGB6 313 aa11.11□□□□□ -0.63
SMPD4-209ENST00000439886 NANPQ8TBE9 248 aa11.11□□□□□ -0.63
SMPD4-209ENST00000439886 NLNQ9BYT8 704 aa11.11□□□□□ -0.63
SMPD4-209ENST00000439886 B3GAT2Q9NPZ5 323 aa11.11□□□□□ -0.63
SMPD4-209ENST00000439886 B3GNT2Q9NY97 397 aa11.11□□□□□ -0.63
SMPD4-209ENST00000439886 PCDHB7Q9Y5E2 793 aa11.11□□□□□ -0.63
SMPD4-209ENST00000439886 SLC22A7Q9Y694 548 aa11.11□□□□□ -0.63
SMPD4-209ENST00000439886 LTBP3Q9NS15 1303 aa11.11□□□□□ -0.63
SMPD4-209ENST00000439886 KDM4BO94953 1096 aa11.11□□□□□ -0.63
SMPD4-209ENST00000439886 ZNF865P0CJ78 1059 aaPredicted RBP11.11□□□□□ -0.63
SMPD4-209ENST00000439886 VRK3Q8IV63 474 aa11.11□□□□□ -0.63
SMPD4-209ENST00000439886 COQ8AQ8NI60 647 aa11.11□□□□□ -0.63
SMPD4-209ENST00000439886 GANCQ8TET4 914 aa11.11□□□□□ -0.63
SMPD4-209ENST00000439886 ASZ1Q8WWH4 475 aa11.11□□□□□ -0.63
SMPD4-209ENST00000439886 XAGE5Q8WWM1 108 aa11.11□□□□□ -0.63
SMPD4-209ENST00000439886 P2RY12Q9H244 342 aa11.11□□□□□ -0.63
SMPD4-209ENST00000439886 CNOT2Q9NZN8 540 aaKnown RBP11.11□□□□□ -0.63
SMPD4-209ENST00000439886 C5AR2Q9P296 337 aa11.11□□□□□ -0.63
SMPD4-209ENST00000439886 PLEKHB1Q9UF11 243 aaPredicted RBP11.11□□□□□ -0.63
SMPD4-209ENST00000439886 TRPV2Q9Y5S1 764 aa11.11□□□□□ -0.63
SMPD4-209ENST00000439886 A0A0A6YYJ9 748 aa11.11□□□□□ -0.63
SMPD4-209ENST00000439886 CELF2O95319 508 aaKnown RBP11.11□□□□□ -0.63
SMPD4-209ENST00000439886 IFNA7P01567 189 aa11.11□□□□□ -0.63
SMPD4-209ENST00000439886 OR56A5P0C7T3 313 aa11.11□□□□□ -0.63
SMPD4-209ENST00000439886 GJA1P17302 382 aa11.11□□□□□ -0.63
SMPD4-209ENST00000439886 RECQLP46063 649 aaPredicted RBP11.11□□□□□ -0.63
SMPD4-209ENST00000439886 WNT3P56703 355 aa11.11□□□□□ -0.63
SMPD4-209ENST00000439886 HSPB3Q12988 150 aa11.11□□□□□ -0.63
SMPD4-209ENST00000439886 NTRK2Q16620 822 aa11.11□□□□□ -0.63
SMPD4-209ENST00000439886 SLC5A12Q1EHB4 618 aa11.11□□□□□ -0.63
SMPD4-209ENST00000439886 LAMTOR1Q6IAA8 161 aa11.11□□□□□ -0.63
SMPD4-209ENST00000439886 GLB1LQ6UWU2 654 aa11.11□□□□□ -0.63
SMPD4-209ENST00000439886 CEACAM20Q6UY09 585 aa11.11□□□□□ -0.63
SMPD4-209ENST00000439886 KANSL1Q7Z3B3 1105 aa11.11□□□□□ -0.63
SMPD4-209ENST00000439886 ZNF655Q8N720 491 aaPredicted RBP11.11□□□□□ -0.63
SMPD4-209ENST00000439886 ARMC5Q96C12 935 aa11.11□□□□□ -0.63
SMPD4-209ENST00000439886 ZNF578Q96N58 590 aaPredicted RBP11.11□□□□□ -0.63
SMPD4-209ENST00000439886 BRD9Q9H8M2 597 aa11.11□□□□□ -0.63
SMPD4-209ENST00000439886 H2AFY2Q9P0M6 372 aaPredicted RBP11.11□□□□□ -0.63
SMPD4-209ENST00000439886 MLXQ9UH92 298 aa11.11□□□□□ -0.63
SMPD4-209ENST00000439886 ADAM30Q9UKF2 790 aa11.11□□□□□ -0.63
SMPD4-209ENST00000439886 CORO2BQ9UQ03 480 aa11.11□□□□□ -0.63
SMPD4-209ENST00000439886 PADI2Q9Y2J8 665 aa11.11□□□□□ -0.63
SMPD4-209ENST00000439886 ENPP4Q9Y6X5 453 aa11.11□□□□□ -0.63
SMPD4-209ENST00000439886 SCAMP2O15127 329 aaKnown RBP11.1□□□□□ -0.63
SMPD4-209ENST00000439886 SFTPCP11686 197 aa11.1□□□□□ -0.63
SMPD4-209ENST00000439886 HOXB3P14651 431 aaPredicted RBP11.1□□□□□ -0.63
SMPD4-209ENST00000439886 BPIP17213 487 aa11.1□□□□□ -0.63
SMPD4-209ENST00000439886 PPIBP23284 216 aaKnown RBP11.1□□□□□ -0.63
SMPD4-209ENST00000439886 CCR7P32248 378 aa11.1□□□□□ -0.63
SMPD4-209ENST00000439886 CSNK1DP48730 415 aa11.1□□□□□ -0.63
SMPD4-209ENST00000439886 MAP2K6P52564 334 aa11.1□□□□□ -0.63
SMPD4-209ENST00000439886 CRYBA2P53672 197 aa11.1□□□□□ -0.63
SMPD4-209ENST00000439886 PPP3R1P63098 170 aa11.1□□□□□ -0.63
SMPD4-209ENST00000439886 RGS1Q08116 209 aa11.1□□□□□ -0.63
SMPD4-209ENST00000439886 ADAM15Q13444 863 aa11.1□□□□□ -0.63
SMPD4-209ENST00000439886 GLYR1Q49A26 553 aaPredicted RBP11.1□□□□□ -0.63
SMPD4-209ENST00000439886 OR2T35Q8NGX2 323 aa11.1□□□□□ -0.63
SMPD4-209ENST00000439886 NARS2Q96I59 477 aaKnown RBP11.1□□□□□ -0.63
SMPD4-209ENST00000439886 GAS2L1Q99501 681 aaPredicted RBP11.1□□□□□ -0.63
SMPD4-209ENST00000439886 YIPF4Q9BSR8 244 aa11.1□□□□□ -0.63
SMPD4-209ENST00000439886 FNDC11Q9BVV2 318 aa11.1□□□□□ -0.63
SMPD4-209ENST00000439886 TTTY10Q9BZA0 68 aa11.1□□□□□ -0.63
SMPD4-209ENST00000439886 HCN3Q9P1Z3 774 aa11.1□□□□□ -0.63
SMPD4-209ENST00000439886 ZNF282Q9UDV7 671 aaPredicted RBP11.1□□□□□ -0.63
SMPD4-209ENST00000439886 SEC14L3Q9UDX4 400 aa11.1□□□□□ -0.63
SMPD4-209ENST00000439886 CCL15-CCL14A0A0B4J2E2 113 aa11.1□□□□□ -0.63
SMPD4-209ENST00000439886 HRO43593 1189 aa11.1□□□□□ -0.63
SMPD4-209ENST00000439886 KDELR3O43731 214 aa11.1□□□□□ -0.63
SMPD4-209ENST00000439886 AKAP8O43823 692 aaKnown RBP11.1□□□□□ -0.63
SMPD4-209ENST00000439886 SLC28A2O43868 658 aa11.1□□□□□ -0.63
SMPD4-209ENST00000439886 PRKYO43930 277 aa11.1□□□□□ -0.63
SMPD4-209ENST00000439886 RAB36O95755 333 aa11.1□□□□□ -0.63
SMPD4-209ENST00000439886 IL1AP01583 271 aa11.1□□□□□ -0.63
SMPD4-209ENST00000439886 CD3GP09693 182 aa11.1□□□□□ -0.63
SMPD4-209ENST00000439886 ANXA3P12429 323 aa11.1□□□□□ -0.63
SMPD4-209ENST00000439886 HMGCLP35914 325 aa11.1□□□□□ -0.63
SMPD4-209ENST00000439886 EPHA5P54756 1037 aa11.1□□□□□ -0.63
SMPD4-209ENST00000439886 PER3P56645 1201 aa11.1□□□□□ -0.63
SMPD4-209ENST00000439886 CCL15Q16663 113 aa11.1□□□□□ -0.63
SMPD4-209ENST00000439886 SWI5Q1ZZU3 235 aa11.1□□□□□ -0.63
SMPD4-209ENST00000439886 TEX261Q6UWH6 196 aa11.1□□□□□ -0.63
SMPD4-209ENST00000439886 FTMTQ8N4E7 242 aa11.1□□□□□ -0.63
SMPD4-209ENST00000439886 OR4D10Q8NGI6 311 aa11.1□□□□□ -0.63
SMPD4-209ENST00000439886 HMGB4Q8WW32 186 aa11.1□□□□□ -0.63
SMPD4-209ENST00000439886 FCRL4Q96PJ5 515 aa11.1□□□□□ -0.63
SMPD4-209ENST00000439886 MS4A7Q9GZW8 240 aaPredicted RBP11.1□□□□□ -0.63
SMPD4-209ENST00000439886 ZDHHC4Q9NPG8 344 aa11.1□□□□□ -0.63
SMPD4-209ENST00000439886 UBQLN2Q9UHD9 624 aa11.1□□□□□ -0.63
SMPD4-209ENST00000439886 U3KQ87 197 aa11.1□□□□□ -0.63
SMPD4-209ENST00000439886 LCTP09848 1927 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms