RNA–Protein interactions for RNA: ENST00000439541.6

CBX5-202, Transcript of chromobox 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX5, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-202ENST00000439541 NCBP2P52298 156 aaKnown RBP eCLIP9.4□□□□□ -0.91
CBX5-202ENST00000439541 LIMK1P53667 647 aa9.4□□□□□ -0.91
CBX5-202ENST00000439541 MAPK10P53779 464 aa9.4□□□□□ -0.91
CBX5-202ENST00000439541 EMP3P54852 163 aa9.4□□□□□ -0.91
CBX5-202ENST00000439541 CASP9P55211 416 aa9.4□□□□□ -0.91
CBX5-202ENST00000439541 PCBP4P57723 403 aaKnown RBP9.4□□□□□ -0.91
CBX5-202ENST00000439541 BTG2P78543 158 aa9.4□□□□□ -0.91
CBX5-202ENST00000439541 E2F1Q01094 437 aa9.4□□□□□ -0.91
CBX5-202ENST00000439541 HMBOX1Q6NT76 420 aa9.4□□□□□ -0.91
CBX5-202ENST00000439541 RHBDD2Q6NTF9 364 aa9.4□□□□□ -0.91
CBX5-202ENST00000439541 MSANTD1Q6ZTZ1 278 aa9.4□□□□□ -0.91
CBX5-202ENST00000439541 CROCCP3Q8IVE0 287 aa9.4□□□□□ -0.91
CBX5-202ENST00000439541 PRSS58Q8IYP2 241 aa9.4□□□□□ -0.91
CBX5-202ENST00000439541 OR9A2Q8NGT5 310 aa9.4□□□□□ -0.91
CBX5-202ENST00000439541 ADAMTS16Q8TE57 1224 aa9.4□□□□□ -0.91
CBX5-202ENST00000439541 CANT1Q8WVQ1 401 aa9.4□□□□□ -0.91
CBX5-202ENST00000439541 COL26A1Q96A83 441 aa9.4□□□□□ -0.91
CBX5-202ENST00000439541 CGREF1Q99674 301 aa9.4□□□□□ -0.91
CBX5-202ENST00000439541 CMKLR1Q99788 373 aa9.4□□□□□ -0.91
CBX5-202ENST00000439541 SLC29A1Q99808 456 aa9.4□□□□□ -0.91
CBX5-202ENST00000439541 NPLQ9BXD5 320 aaPredicted RBP9.4□□□□□ -0.91
CBX5-202ENST00000439541 GLIPR2Q9H4G4 154 aa9.4□□□□□ -0.91
CBX5-202ENST00000439541 CXorf36Q9H7Y0 433 aa9.4□□□□□ -0.91
CBX5-202ENST00000439541 ANKRA2Q9H9E1 313 aa9.4□□□□□ -0.91
CBX5-202ENST00000439541 AGPAT4Q9NRZ5 378 aa9.4□□□□□ -0.91
CBX5-202ENST00000439541 SLC22A11Q9NSA0 550 aa9.4□□□□□ -0.91
CBX5-202ENST00000439541 CMTM6Q9NX76 183 aa9.4□□□□□ -0.91
CBX5-202ENST00000439541 TRPC4Q9UBN4 977 aa9.4□□□□□ -0.91
CBX5-202ENST00000439541 PISDQ9UG56 409 aa9.4□□□□□ -0.91
CBX5-202ENST00000439541 SRPK3Q9UPE1 567 aa9.4□□□□□ -0.91
CBX5-202ENST00000439541 USP22Q9UPT9 525 aa9.4□□□□□ -0.91
CBX5-202ENST00000439541 MAPRE3Q9UPY8 281 aa9.4□□□□□ -0.91
CBX5-202ENST00000439541 ENTPD4Q9Y227 616 aa9.4□□□□□ -0.91
CBX5-202ENST00000439541 PCDHB14Q9Y5E9 798 aa9.4□□□□□ -0.91
CBX5-202ENST00000439541 H0YIG0 161 aa9.39□□□□□ -0.91
CBX5-202ENST00000439541 GFRA3O60609 400 aa9.39□□□□□ -0.91
CBX5-202ENST00000439541 ATP6V1B2P21281 511 aa9.39□□□□□ -0.91
CBX5-202ENST00000439541 MAOAP21397 527 aa9.39□□□□□ -0.91
CBX5-202ENST00000439541 PPP2R1BP30154 601 aa9.39□□□□□ -0.91
CBX5-202ENST00000439541 NTSP30990 170 aa9.39□□□□□ -0.91
CBX5-202ENST00000439541 TLX1P31314 330 aaPredicted RBP9.39□□□□□ -0.91
CBX5-202ENST00000439541 SLC5A2P31639 672 aa9.39□□□□□ -0.91
CBX5-202ENST00000439541 FRKP42685 505 aaPredicted RBP9.39□□□□□ -0.91
CBX5-202ENST00000439541 NOVA1P51513 510 aaKnown RBP9.39□□□□□ -0.91
CBX5-202ENST00000439541 ARSFP54793 590 aa9.39□□□□□ -0.91
CBX5-202ENST00000439541 SKP1P63208 163 aa9.39□□□□□ -0.91
CBX5-202ENST00000439541 HPCAP84074 193 aa9.39□□□□□ -0.91
CBX5-202ENST00000439541 MC2RQ01718 297 aa9.39□□□□□ -0.91
CBX5-202ENST00000439541 DSG2Q14126 1118 aa9.39□□□□□ -0.91
CBX5-202ENST00000439541 VWA2Q5GFL6 755 aa9.39□□□□□ -0.91
CBX5-202ENST00000439541 C3orf38Q5JPI3 329 aa9.39□□□□□ -0.91
CBX5-202ENST00000439541 LRIF1Q5T3J3 769 aa9.39□□□□□ -0.91
CBX5-202ENST00000439541 ANXA8L1Q5VT79 327 aa9.39□□□□□ -0.91
CBX5-202ENST00000439541 LCN10Q6JVE6 187 aa9.39□□□□□ -0.91
CBX5-202ENST00000439541 TTC33Q6PID6 262 aaPredicted RBP9.39□□□□□ -0.91
CBX5-202ENST00000439541 SHISA6Q6ZSJ9 500 aa9.39□□□□□ -0.91
CBX5-202ENST00000439541 ZNF621Q6ZSS3 439 aa9.39□□□□□ -0.91
CBX5-202ENST00000439541 RAB11FIP2Q7L804 512 aa9.39□□□□□ -0.91
CBX5-202ENST00000439541 GPR141Q7Z602 305 aa9.39□□□□□ -0.91
CBX5-202ENST00000439541 SLC15A3Q8IY34 581 aa9.39□□□□□ -0.91
CBX5-202ENST00000439541 CCDC116Q8IYX3 515 aa9.39□□□□□ -0.91
CBX5-202ENST00000439541 TMEM125Q96AQ2 219 aa9.39□□□□□ -0.91
CBX5-202ENST00000439541 PPP1R14BQ96C90 147 aa9.39□□□□□ -0.91
CBX5-202ENST00000439541 MVB12AQ96EY5 273 aa9.39□□□□□ -0.91
CBX5-202ENST00000439541 ZNF764Q96H86 408 aaPredicted RBP9.39□□□□□ -0.91
CBX5-202ENST00000439541 ZNF681Q96N22 645 aa9.39□□□□□ -0.91
CBX5-202ENST00000439541 AMDHD1Q96NU7 426 aa9.39□□□□□ -0.91
CBX5-202ENST00000439541 BBS4Q96RK4 519 aa9.39□□□□□ -0.91
CBX5-202ENST00000439541 CPPED1Q9BRF8 314 aaPredicted RBP9.39□□□□□ -0.91
CBX5-202ENST00000439541 YTHDF1Q9BYJ9 559 aaKnown RBP9.39□□□□□ -0.91
CBX5-202ENST00000439541 STRADBQ9C0K7 418 aa9.39□□□□□ -0.91
CBX5-202ENST00000439541 PIF1Q9H611 641 aa9.39□□□□□ -0.91
CBX5-202ENST00000439541 AKIRIN1Q9H9L7 192 aaPredicted RBP9.39□□□□□ -0.91
CBX5-202ENST00000439541 ZNF304Q9HCX3 659 aa9.39□□□□□ -0.91
CBX5-202ENST00000439541 SIRT3Q9NTG7 399 aaPredicted RBP9.39□□□□□ -0.91
CBX5-202ENST00000439541 DDX18Q9NVP1 670 aaKnown RBP9.39□□□□□ -0.91
CBX5-202ENST00000439541 MS4A12Q9NXJ0 267 aa9.39□□□□□ -0.91
CBX5-202ENST00000439541 SLC39A1Q9NY26 324 aa9.39□□□□□ -0.91
CBX5-202ENST00000439541 BTNL2Q9UIR0 455 aa9.39□□□□□ -0.91
CBX5-202ENST00000439541 AURKCQ9UQB9 309 aa9.39□□□□□ -0.91
CBX5-202ENST00000439541 SNX8Q9Y5X2 465 aa9.39□□□□□ -0.91
CBX5-202ENST00000439541 B3GALT1Q9Y5Z6 326 aa9.39□□□□□ -0.91
CBX5-202ENST00000439541 SPACA6W5XKT8 324 aa9.39□□□□□ -0.91
CBX5-202ENST00000439541 RNF103-CHMP3A0A140T963 221 aa9.38□□□□□ -0.91
CBX5-202ENST00000439541 TRIM64CA6NLI5 447 aa9.38□□□□□ -0.91
CBX5-202ENST00000439541 MYO1GB0I1T2 1018 aa9.38□□□□□ -0.91
CBX5-202ENST00000439541 TM4SF5O14894 197 aa9.38□□□□□ -0.91
CBX5-202ENST00000439541 NME6O75414 186 aaPredicted RBP9.38□□□□□ -0.91
CBX5-202ENST00000439541 DKK1O94907 266 aa9.38□□□□□ -0.91
CBX5-202ENST00000439541 FHP07954 510 aa9.38□□□□□ -0.91
CBX5-202ENST00000439541 PCSK2P16519 638 aa9.38□□□□□ -0.91
CBX5-202ENST00000439541 RORAP35398 523 aa9.38□□□□□ -0.91
CBX5-202ENST00000439541 MANFP55145 182 aaKnown RBP9.38□□□□□ -0.91
CBX5-202ENST00000439541 EEFSECP57772 596 aaKnown RBP9.38□□□□□ -0.91
CBX5-202ENST00000439541 MERTKQ12866 999 aa9.38□□□□□ -0.91
CBX5-202ENST00000439541 SLC13A2Q13183 592 aa9.38□□□□□ -0.91
CBX5-202ENST00000439541 IL11RAQ14626 422 aa9.38□□□□□ -0.91
CBX5-202ENST00000439541 ZBED5Q49AG3 693 aa9.38□□□□□ -0.91
CBX5-202ENST00000439541 MFSD4BQ5TF39 518 aa9.38□□□□□ -0.91
CBX5-202ENST00000439541 ZNF385CQ66K41 422 aaPredicted RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms