RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 PQLC2Q6ZP29 291 aa3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 CDHR3Q6ZTQ4 885 aa3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 SSX9Q7RTT3 188 aa3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 ABHD12BQ7Z5M8 362 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 SNX20Q7Z614 316 aa3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 ITPRIPQ8IWB1 547 aa3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 TDHQ8IZJ6 230 aa3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 GABRG1Q8N1C3 465 aa3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 C17orf78Q8N4C9 275 aa3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 CEP112Q8N8E3 955 aa3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 KBTBD3Q8NAB2 608 aa3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 CYB561A3Q8NBI2 242 aa3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 ADPRHL1Q8NDY3 354 aa3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 GJC3Q8NFK1 279 aa3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 OR4N2Q8NGD1 307 aa3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 OR5T3Q8NGG3 340 aa3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 GIPC3Q8TF64 312 aa3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 ADAMTS14Q8WXS8 1223 aa3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 LHX4Q969G2 390 aa3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 SLC38A4Q969I6 547 aa3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 COQ8BQ96D53 544 aa3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 RSPRY1Q96DX4 576 aa3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 ZNF274Q96GC6 653 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 MARK4Q96L34 752 aa3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 PRMT6Q96LA8 375 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 PPP1R36Q96LQ0 422 aa3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 SFXN2Q96NB2 322 aa3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 TSSK3Q96PN8 268 aa3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 ACCSQ96QU6 501 aa3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 OR6C1Q96RD1 312 aa3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 PNKPQ96T60 521 aa3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 TUBGCP2Q9BSJ2 902 aa3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 PCGF1Q9BSM1 259 aa3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 LRRC1Q9BTT6 524 aa3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 C20orf24Q9BUV8 137 aa3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 RBM24Q9BX46 236 aaKnown RBP3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 DPAGT1Q9H3H5 408 aa3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 CENPHQ9H3R5 247 aa3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 NARFLQ9H6Q4 476 aa3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 RANBP3Q9H6Z4 567 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 ASB8Q9H765 288 aa3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 CDH20Q9HBT6 801 aa3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 TREX1Q9NSU2 369 aa3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 TXLNGQ9NUQ3 528 aa3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 POT1Q9NUX5 634 aa3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 PIPOXQ9P0Z9 390 aa3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 SLC17A7Q9P2U7 560 aa3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 P2RX2Q9UBL9 471 aa3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 SLC7A8Q9UHI5 535 aa3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 PSORS1C1Q9UIG5 152 aa3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 NAGKQ9UJ70 344 aa3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 PITPNC1Q9UKF7 332 aa3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 UTS2RQ9UKP6 389 aa3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 KLK4Q9Y5K2 254 aa3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 ANKRD30AQ9BXX3 1397 aa3.35□□□□□ -1.87
HMGB1P12-201ENST00000438594 LOC105371242A0A075B767 164 aa3.34□□□□□ -1.87
HMGB1P12-201ENST00000438594 A0A0U1RQF3 1178 aa3.34□□□□□ -1.87
HMGB1P12-201ENST00000438594 RAB19A4D1S5 217 aa3.34□□□□□ -1.87
HMGB1P12-201ENST00000438594 A6NNC1 897 aa3.34□□□□□ -1.87
HMGB1P12-201ENST00000438594 LINC00473A8K010 186 aa3.34□□□□□ -1.87
HMGB1P12-201ENST00000438594 SERPINE3A8MV23 424 aa3.34□□□□□ -1.87
HMGB1P12-201ENST00000438594 CENPBD1B2RD01 187 aa3.34□□□□□ -1.87
HMGB1P12-201ENST00000438594 FAM157AC9JC47 383 aa3.34□□□□□ -1.87
HMGB1P12-201ENST00000438594 HHLA1C9JL84 531 aa3.34□□□□□ -1.87
HMGB1P12-201ENST00000438594 DLGAP1O14490 977 aa3.34□□□□□ -1.87
HMGB1P12-201ENST00000438594 MPPED1O15442 326 aa3.34□□□□□ -1.87
HMGB1P12-201ENST00000438594 RS1O15537 224 aa3.34□□□□□ -1.87
HMGB1P12-201ENST00000438594 SSX4O60224 188 aa3.34□□□□□ -1.87
HMGB1P12-201ENST00000438594 CIAO1O76071 339 aa3.34□□□□□ -1.87
HMGB1P12-201ENST00000438594 CLDN7O95471 211 aa3.34□□□□□ -1.87
HMGB1P12-201ENST00000438594 PGK1P00558 417 aa3.34□□□□□ -1.87
HMGB1P12-201ENST00000438594 HLA-DQA2P01906 255 aa3.34□□□□□ -1.87
HMGB1P12-201ENST00000438594 SERPINE2P07093 398 aa3.34□□□□□ -1.87
HMGB1P12-201ENST00000438594 SFTPBP07988 381 aa3.34□□□□□ -1.87
HMGB1P12-201ENST00000438594 SERPINA6P08185 405 aa3.34□□□□□ -1.87
HMGB1P12-201ENST00000438594 OR2T7P0C7T2 308 aa3.34□□□□□ -1.87
HMGB1P12-201ENST00000438594 UBTFL1P0CB47 393 aaPredicted RBP3.34□□□□□ -1.87
HMGB1P12-201ENST00000438594 FCGR1AP12314 374 aa3.34□□□□□ -1.87
HMGB1P12-201ENST00000438594 CREB1P16220 341 aa3.34□□□□□ -1.87
HMGB1P12-201ENST00000438594 EPCAMP16422 314 aa3.34□□□□□ -1.87
HMGB1P12-201ENST00000438594 SRD5A1P18405 259 aa3.34□□□□□ -1.87
HMGB1P12-201ENST00000438594 UBA1P22314 1058 aaKnown RBP3.34□□□□□ -1.87
HMGB1P12-201ENST00000438594 MPGP29372 298 aa3.34□□□□□ -1.87
HMGB1P12-201ENST00000438594 CASP14P31944 242 aa3.34□□□□□ -1.87
HMGB1P12-201ENST00000438594 P2RY2P41231 377 aa3.34□□□□□ -1.87
HMGB1P12-201ENST00000438594 MNAT1P51948 309 aa3.34□□□□□ -1.87
HMGB1P12-201ENST00000438594 NAPAP54920 295 aa3.34□□□□□ -1.87
HMGB1P12-201ENST00000438594 HERV-K104P63124 156 aa3.34□□□□□ -1.87
HMGB1P12-201ENST00000438594 FKBP1BP68106 108 aa3.34□□□□□ -1.87
HMGB1P12-201ENST00000438594 CYP4F2P78329 520 aa3.34□□□□□ -1.87
HMGB1P12-201ENST00000438594 CDK16Q00536 496 aa3.34□□□□□ -1.87
HMGB1P12-201ENST00000438594 GLO1Q04760 184 aa3.34□□□□□ -1.87
HMGB1P12-201ENST00000438594 BST2Q10589 180 aaKnown RBP3.34□□□□□ -1.87
HMGB1P12-201ENST00000438594 MADCAM1Q13477 382 aa3.34□□□□□ -1.87
HMGB1P12-201ENST00000438594 NR1D2Q14995 579 aa3.34□□□□□ -1.87
HMGB1P12-201ENST00000438594 STX1AQ16623 288 aa3.34□□□□□ -1.87
HMGB1P12-201ENST00000438594 CA9Q16790 459 aa3.34□□□□□ -1.87
HMGB1P12-201ENST00000438594 ZNF528Q3MIS6 628 aa3.34□□□□□ -1.87
HMGB1P12-201ENST00000438594 DCAF4L1Q3SXM0 396 aa3.34□□□□□ -1.87
HMGB1P12-201ENST00000438594 LINC01620Q4KN68 170 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms