RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 IL17RDQ8NFM7 739 aa11.15□□□□□ -0.62
CD44-209ENST00000433892 OR4K5Q8NGD3 323 aa11.15□□□□□ -0.62
CD44-209ENST00000433892 OR6T1Q8NGN1 323 aa11.15□□□□□ -0.62
CD44-209ENST00000433892 TMEM203Q969S6 136 aa11.15□□□□□ -0.62
CD44-209ENST00000433892 ZNF707Q96C28 371 aaPredicted RBP11.15□□□□□ -0.62
CD44-209ENST00000433892 PAWRQ96IZ0 340 aaKnown RBP11.15□□□□□ -0.62
CD44-209ENST00000433892 LRR1Q96L50 414 aa11.15□□□□□ -0.62
CD44-209ENST00000433892 CCDC32Q9BV29 185 aa11.15□□□□□ -0.62
CD44-209ENST00000433892 AICDAQ9GZX7 198 aa11.15□□□□□ -0.62
CD44-209ENST00000433892 TMEM245Q9H330 911 aa11.15□□□□□ -0.62
CD44-209ENST00000433892 XKR8Q9H6D3 395 aa11.15□□□□□ -0.62
CD44-209ENST00000433892 C3orf14Q9HBI5 128 aa11.15□□□□□ -0.62
CD44-209ENST00000433892 SEC14L4Q9UDX3 406 aa11.15□□□□□ -0.62
CD44-209ENST00000433892 MUTYHQ9UIF7 546 aa11.15□□□□□ -0.62
CD44-209ENST00000433892 STUB1Q9UNE7 303 aa11.15□□□□□ -0.62
CD44-209ENST00000433892 OR1A2Q9Y585 309 aa11.15□□□□□ -0.62
CD44-209ENST00000433892 NUP210Q8TEM1 1887 aaPredicted RBP11.15□□□□□ -0.62
CD44-209ENST00000433892 IGKV1-8A0A0C4DH67 115 aa11.15□□□□□ -0.62
CD44-209ENST00000433892 H3BQ06 376 aaPredicted RBP11.15□□□□□ -0.62
CD44-209ENST00000433892 TRANK1O15050 2925 aa11.15□□□□□ -0.62
CD44-209ENST00000433892 DYRK3O43781 588 aa11.15□□□□□ -0.62
CD44-209ENST00000433892 ERAL1O75616 437 aaKnown RBP11.15□□□□□ -0.62
CD44-209ENST00000433892 SLITRK5O94991 958 aa11.15□□□□□ -0.62
CD44-209ENST00000433892 APOL3O95236 402 aa11.15□□□□□ -0.62
CD44-209ENST00000433892 EPPINO95925 133 aa11.15□□□□□ -0.62
CD44-209ENST00000433892 HNRNPA1P09651 372 aaKnown RBP eCLIP11.15□□□□□ -0.62
CD44-209ENST00000433892 SLC35G4P0C7Q5 338 aa11.15□□□□□ -0.62
CD44-209ENST00000433892 DDX5P17844 614 aaKnown RBP11.15□□□□□ -0.62
CD44-209ENST00000433892 ENDOUP21128 410 aaKnown RBP11.15□□□□□ -0.62
CD44-209ENST00000433892 PPP2R1BP30154 601 aa11.15□□□□□ -0.62
CD44-209ENST00000433892 BUD31P41223 144 aaPredicted RBP11.15□□□□□ -0.62
CD44-209ENST00000433892 NR4A2P43354 598 aa11.15□□□□□ -0.62
CD44-209ENST00000433892 PCYT1AP49585 367 aa11.15□□□□□ -0.62
CD44-209ENST00000433892 RORCP51449 518 aa11.15□□□□□ -0.62
CD44-209ENST00000433892 HTRA3P83110 453 aa11.15□□□□□ -0.62
CD44-209ENST00000433892 C1DQ13901 141 aaKnown RBP11.15□□□□□ -0.62
CD44-209ENST00000433892 OCLNQ16625 522 aa11.15□□□□□ -0.62
CD44-209ENST00000433892 WSCD2Q2TBF2 565 aa11.15□□□□□ -0.62
CD44-209ENST00000433892 GAB4Q2WGN9 574 aa11.15□□□□□ -0.62
CD44-209ENST00000433892 ZNF750Q32MQ0 723 aa11.15□□□□□ -0.62
CD44-209ENST00000433892 SYT14P1Q58G82 188 aa11.15□□□□□ -0.62
CD44-209ENST00000433892 TMEM53Q6P2H8 277 aa11.15□□□□□ -0.62
CD44-209ENST00000433892 TMC5Q6UXY8 1006 aa11.15□□□□□ -0.62
CD44-209ENST00000433892 ZNF793Q6ZN11 406 aa11.15□□□□□ -0.62
CD44-209ENST00000433892 USP30Q70CQ3 517 aa11.15□□□□□ -0.62
CD44-209ENST00000433892 UTS2BQ765I0 119 aa11.15□□□□□ -0.62
CD44-209ENST00000433892 TRIM69Q86WT6 500 aa11.15□□□□□ -0.62
CD44-209ENST00000433892 PHC2Q8IXK0 858 aa11.15□□□□□ -0.62
CD44-209ENST00000433892 FLCNQ8NFG4 579 aa11.15□□□□□ -0.62
CD44-209ENST00000433892 ASB15Q8WXK1 588 aa11.15□□□□□ -0.62
CD44-209ENST00000433892 FERD3LQ96RJ6 166 aa11.15□□□□□ -0.62
CD44-209ENST00000433892 PRR14Q9BWN1 585 aa11.15□□□□□ -0.62
CD44-209ENST00000433892 PCBD2Q9H0N5 130 aa11.15□□□□□ -0.62
CD44-209ENST00000433892 QRSL1Q9H0R6 528 aaKnown RBP11.15□□□□□ -0.62
CD44-209ENST00000433892 OSGEPL1Q9H4B0 414 aa11.15□□□□□ -0.62
CD44-209ENST00000433892 KLHL31Q9H511 634 aa11.15□□□□□ -0.62
CD44-209ENST00000433892 DDX31Q9H8H2 851 aaKnown RBP11.15□□□□□ -0.62
CD44-209ENST00000433892 SLC35C2Q9NQQ7 365 aa11.15□□□□□ -0.62
CD44-209ENST00000433892 MAN2C1Q9NTJ4 1040 aa11.15□□□□□ -0.62
CD44-209ENST00000433892 NDUFB11Q9NX14 153 aa11.15□□□□□ -0.62
CD44-209ENST00000433892 HCN2Q9UL51 889 aa11.15□□□□□ -0.62
CD44-209ENST00000433892 TBC1D24Q9ULP9 559 aa11.15□□□□□ -0.62
CD44-209ENST00000433892 KLHL20Q9Y2M5 609 aa11.15□□□□□ -0.62
CD44-209ENST00000433892 MYO10Q9HD67 2058 aa11.14□□□□□ -0.63
CD44-209ENST00000433892 A0A0A6YYD5 115 aa11.14□□□□□ -0.63
CD44-209ENST00000433892 HYKKA2RU49 373 aa11.14□□□□□ -0.63
CD44-209ENST00000433892 LRIT2A6NDA9 550 aa11.14□□□□□ -0.63
CD44-209ENST00000433892 ZNF670-ZNF695F2Z2N8 137 aa11.14□□□□□ -0.63
CD44-209ENST00000433892 PLD2O14939 933 aa11.14□□□□□ -0.63
CD44-209ENST00000433892 KIAA0355O15063 1070 aa11.14□□□□□ -0.63
CD44-209ENST00000433892 EPHX1P07099 455 aa11.14□□□□□ -0.63
CD44-209ENST00000433892 CHRM4P08173 479 aa11.14□□□□□ -0.63
CD44-209ENST00000433892 AZGP1P25311 298 aaKnown RBP11.14□□□□□ -0.63
CD44-209ENST00000433892 HSD17B2P37059 387 aa11.14□□□□□ -0.63
CD44-209ENST00000433892 ETV5P41161 510 aa11.14□□□□□ -0.63
CD44-209ENST00000433892 GIPRP48546 466 aa11.14□□□□□ -0.63
CD44-209ENST00000433892 ETV1P50549 477 aa11.14□□□□□ -0.63
CD44-209ENST00000433892 LASP1Q14847 261 aaKnown RBP11.14□□□□□ -0.63
CD44-209ENST00000433892 TMPRSS11AQ6ZMR5 421 aa11.14□□□□□ -0.63
CD44-209ENST00000433892 GDPGP1Q6ZNW5 385 aa11.14□□□□□ -0.63
CD44-209ENST00000433892 NRARPQ7Z6K4 114 aa11.14□□□□□ -0.63
CD44-209ENST00000433892 C11orf74Q86VG3 221 aa11.14□□□□□ -0.63
CD44-209ENST00000433892 C12orf76Q8N812 135 aaPredicted RBP11.14□□□□□ -0.63
CD44-209ENST00000433892 OR52I1Q8NGK6 324 aa11.14□□□□□ -0.63
CD44-209ENST00000433892 SUSD6Q92537 303 aa11.14□□□□□ -0.63
CD44-209ENST00000433892 EFHD2Q96C19 240 aaPredicted RBP11.14□□□□□ -0.63
CD44-209ENST00000433892 OR2A14Q96R47 310 aa11.14□□□□□ -0.63
CD44-209ENST00000433892 BBS4Q96RK4 519 aa11.14□□□□□ -0.63
CD44-209ENST00000433892 SIAEQ9HAT2 523 aa11.14□□□□□ -0.63
CD44-209ENST00000433892 SSR3Q9UNL2 185 aa11.14□□□□□ -0.63
CD44-209ENST00000433892 CARD8Q9Y2G2 431 aa11.14□□□□□ -0.63
CD44-209ENST00000433892 V9GYH0 126 aa11.14□□□□□ -0.63
CD44-209ENST00000433892 COL4A3Q01955 1670 aa11.14□□□□□ -0.63
CD44-209ENST00000433892 LINC00854A0A1B0GVQ3 168 aa11.14□□□□□ -0.63
CD44-209ENST00000433892 TBC1D3BA6NDS4 549 aa11.14□□□□□ -0.63
CD44-209ENST00000433892 PGRMC2O15173 223 aa11.14□□□□□ -0.63
CD44-209ENST00000433892 COQ9O75208 318 aa11.14□□□□□ -0.63
CD44-209ENST00000433892 CDRT1O95170 752 aa11.14□□□□□ -0.63
CD44-209ENST00000433892 HOXB3P14651 431 aaPredicted RBP11.14□□□□□ -0.63
CD44-209ENST00000433892 IL12RB1P42701 662 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms