RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 LRRC61Q9BV99 259 aa12.27□□□□□ -0.45
PTCH1-207ENST00000429896 PPIL1Q9Y3C6 166 aa12.27□□□□□ -0.45
PTCH1-207ENST00000429896 CPNE3O75131 537 aaKnown RBP12.26□□□□□ -0.45
PTCH1-207ENST00000429896 SOX30O94993 753 aa12.26□□□□□ -0.45
PTCH1-207ENST00000429896 BTBD16Q32M84 506 aa12.26□□□□□ -0.45
PTCH1-207ENST00000429896 LMNTD1Q8N9Z9 388 aa12.26□□□□□ -0.45
PTCH1-207ENST00000429896 TANKQ92844 425 aa12.26□□□□□ -0.45
PTCH1-207ENST00000429896 APIPQ96GX9 242 aa12.26□□□□□ -0.45
PTCH1-207ENST00000429896 CCDC115Q96NT0 180 aa12.26□□□□□ -0.45
PTCH1-207ENST00000429896 GPN2Q9H9Y4 310 aaPredicted RBP12.26□□□□□ -0.45
PTCH1-207ENST00000429896 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.26□□□□□ -0.45
PTCH1-207ENST00000429896 PARPBPQ9NWS1 579 aa12.26□□□□□ -0.45
PTCH1-207ENST00000429896 C4orf47A7E2U8 309 aa12.26□□□□□ -0.45
PTCH1-207ENST00000429896 HSF2Q03933 536 aa12.26□□□□□ -0.45
PTCH1-207ENST00000429896 CLCA4Q14CN2 919 aa12.26□□□□□ -0.45
PTCH1-207ENST00000429896 ODF4Q2M2E3 257 aa12.26□□□□□ -0.45
PTCH1-207ENST00000429896 ABHD17BQ5VST6 288 aa12.26□□□□□ -0.45
PTCH1-207ENST00000429896 OR9I1Q8NGQ6 314 aa12.26□□□□□ -0.45
PTCH1-207ENST00000429896 OLIG1Q8TAK6 271 aa12.26□□□□□ -0.45
PTCH1-207ENST00000429896 ZNF570Q96NI8 536 aa12.26□□□□□ -0.45
PTCH1-207ENST00000429896 CITED4Q96RK1 184 aa12.26□□□□□ -0.45
PTCH1-207ENST00000429896 SPATA9Q9BWV2 254 aa12.26□□□□□ -0.45
PTCH1-207ENST00000429896 FGF21Q9NSA1 209 aa12.26□□□□□ -0.45
PTCH1-207ENST00000429896 AIG1Q9NVV5 245 aa12.26□□□□□ -0.45
PTCH1-207ENST00000429896 NOVA1P51513 510 aaKnown RBP12.26□□□□□ -0.45
PTCH1-207ENST00000429896 PUM1Q14671 1186 aaKnown RBP eCLIP12.26□□□□□ -0.45
PTCH1-207ENST00000429896 SLC5A12Q1EHB4 618 aa12.26□□□□□ -0.45
PTCH1-207ENST00000429896 COLEC12Q5KU26 742 aa12.26□□□□□ -0.45
PTCH1-207ENST00000429896 FAM156AQ8NDB6 213 aa12.26□□□□□ -0.45
PTCH1-207ENST00000429896 MKKSQ9NPJ1 570 aaPredicted RBP12.26□□□□□ -0.45
PTCH1-207ENST00000429896 POLE3Q9NRF9 147 aa12.26□□□□□ -0.45
PTCH1-207ENST00000429896 MBD2Q9UBB5 411 aa12.26□□□□□ -0.45
PTCH1-207ENST00000429896 TRIM64A6NGJ6 449 aa12.26□□□□□ -0.45
PTCH1-207ENST00000429896 ADAM23O75077 832 aa12.26□□□□□ -0.45
PTCH1-207ENST00000429896 GLB1P16278 677 aa12.26□□□□□ -0.45
PTCH1-207ENST00000429896 DCDP81605 110 aaKnown RBP12.26□□□□□ -0.45
PTCH1-207ENST00000429896 C6orf132Q5T0Z8 1188 aa12.26□□□□□ -0.45
PTCH1-207ENST00000429896 NUP54Q7Z3B4 507 aa12.26□□□□□ -0.45
PTCH1-207ENST00000429896 ACOT4Q8N9L9 421 aa12.26□□□□□ -0.45
PTCH1-207ENST00000429896 UBXN10Q96LJ8 280 aa12.26□□□□□ -0.45
PTCH1-207ENST00000429896 GORASP1Q9BQQ3 440 aa12.26□□□□□ -0.45
PTCH1-207ENST00000429896 EURLQ9NYK6 297 aa12.26□□□□□ -0.45
PTCH1-207ENST00000429896 VILLO15195 856 aa12.26□□□□□ -0.45
PTCH1-207ENST00000429896 SIGLEC6O43699 453 aa12.26□□□□□ -0.45
PTCH1-207ENST00000429896 MPP2Q14168 576 aa12.26□□□□□ -0.45
PTCH1-207ENST00000429896 KHDC1Q4VXA5 237 aaKnown RBP12.26□□□□□ -0.45
PTCH1-207ENST00000429896 ANKFN1Q8N957 763 aa12.26□□□□□ -0.45
PTCH1-207ENST00000429896 IFT46Q9NQC8 304 aa12.26□□□□□ -0.45
PTCH1-207ENST00000429896 FARSBQ9NSD9 589 aaKnown RBP12.26□□□□□ -0.45
PTCH1-207ENST00000429896 AP4B1Q9Y6B7 739 aa12.26□□□□□ -0.45
PTCH1-207ENST00000429896 WRBO00258 174 aa12.25□□□□□ -0.45
PTCH1-207ENST00000429896 EIF1AYO14602 144 aaKnown RBP12.25□□□□□ -0.45
PTCH1-207ENST00000429896 NADKO95544 446 aaPredicted RBP12.25□□□□□ -0.45
PTCH1-207ENST00000429896 NME1P15531 152 aaKnown RBP12.25□□□□□ -0.45
PTCH1-207ENST00000429896 ARNTP27540 789 aa12.25□□□□□ -0.45
PTCH1-207ENST00000429896 RIN1Q13671 783 aa12.25□□□□□ -0.45
PTCH1-207ENST00000429896 FLYWCH1Q4VC44 716 aa12.25□□□□□ -0.45
PTCH1-207ENST00000429896 SHISA6Q6ZSJ9 500 aa12.25□□□□□ -0.45
PTCH1-207ENST00000429896 DGLUCYQ7Z3D6 616 aa12.25□□□□□ -0.45
PTCH1-207ENST00000429896 WDR5BQ86VZ2 330 aa12.25□□□□□ -0.45
PTCH1-207ENST00000429896 OR10H4Q8NGA5 316 aa12.25□□□□□ -0.45
PTCH1-207ENST00000429896 CTRCQ99895 268 aa12.25□□□□□ -0.45
PTCH1-207ENST00000429896 E7ENX8 843 aa12.25□□□□□ -0.45
PTCH1-207ENST00000429896 ADAMDEC1O15204 470 aa12.25□□□□□ -0.45
PTCH1-207ENST00000429896 RFPL3O75679 317 aa12.25□□□□□ -0.45
PTCH1-207ENST00000429896 NPPAP01160 153 aa12.25□□□□□ -0.45
PTCH1-207ENST00000429896 CBLP22681 906 aa12.25□□□□□ -0.45
PTCH1-207ENST00000429896 IGFBP5P24593 272 aa12.25□□□□□ -0.45
PTCH1-207ENST00000429896 TAP2Q03519 686 aa12.25□□□□□ -0.45
PTCH1-207ENST00000429896 DMWDQ09019 674 aa12.25□□□□□ -0.45
PTCH1-207ENST00000429896 AHSA2Q719I0 299 aa12.25□□□□□ -0.45
PTCH1-207ENST00000429896 SPATC1Q76KD6 591 aa12.25□□□□□ -0.45
PTCH1-207ENST00000429896 SFRP1Q8N474 314 aa12.25□□□□□ -0.45
PTCH1-207ENST00000429896 ASB15Q8WXK1 588 aa12.25□□□□□ -0.45
PTCH1-207ENST00000429896 PRAMEF2O60811 474 aa12.25□□□□□ -0.45
PTCH1-207ENST00000429896 XRCC1P18887 633 aaPredicted RBP12.25□□□□□ -0.45
PTCH1-207ENST00000429896 CCNOP22674 350 aa12.25□□□□□ -0.45
PTCH1-207ENST00000429896 DRD3P35462 400 aa12.25□□□□□ -0.45
PTCH1-207ENST00000429896 CDH12P55289 794 aa12.25□□□□□ -0.45
PTCH1-207ENST00000429896 TAS2R38P59533 333 aa12.25□□□□□ -0.45
PTCH1-207ENST00000429896 BNIP3Q12983 259 aa12.25□□□□□ -0.45
PTCH1-207ENST00000429896 AMER2Q8N7J2 671 aa12.25□□□□□ -0.45
PTCH1-207ENST00000429896 WDR45Q9Y484 360 aa12.25□□□□□ -0.45
PTCH1-207ENST00000429896 PDE4DIPQ5VU43 2346 aa12.25□□□□□ -0.45
PTCH1-207ENST00000429896 TRBV5-4A0A0C4DH59 114 aa12.25□□□□□ -0.45
PTCH1-207ENST00000429896 LMO7DNF2Z398 122 aa12.25□□□□□ -0.45
PTCH1-207ENST00000429896 GP1BBP13224 206 aa12.25□□□□□ -0.45
PTCH1-207ENST00000429896 CAPGP40121 348 aa12.25□□□□□ -0.45
PTCH1-207ENST00000429896 CLDN8P56748 225 aa12.25□□□□□ -0.45
PTCH1-207ENST00000429896 RAB25P57735 213 aa12.25□□□□□ -0.45
PTCH1-207ENST00000429896 REEP5Q00765 189 aa12.25□□□□□ -0.45
PTCH1-207ENST00000429896 PATE1Q8WXA2 126 aa12.25□□□□□ -0.45
PTCH1-207ENST00000429896 SLC35F4A4IF30 521 aa12.25□□□□□ -0.45
PTCH1-207ENST00000429896 C17orf105B2RV13 164 aa12.25□□□□□ -0.45
PTCH1-207ENST00000429896 PIAS2O75928 621 aa12.25□□□□□ -0.45
PTCH1-207ENST00000429896 ENDOUP21128 410 aaKnown RBP12.25□□□□□ -0.45
PTCH1-207ENST00000429896 LTBRP36941 435 aa12.25□□□□□ -0.45
PTCH1-207ENST00000429896 DNASE1L3Q13609 305 aa12.25□□□□□ -0.45
PTCH1-207ENST00000429896 TCEAL6Q6IPX3 200 aa12.25□□□□□ -0.45
PTCH1-207ENST00000429896 HORMAD2Q8N7B1 307 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms