RNA–Protein interactions for RNA: ENST00000429836.5

SEMA4D-209, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-209ENST00000429836 C12orf66Q96MD2 445 aa10.51□□□□□ -0.73
SEMA4D-209ENST00000429836 FOPNLQ96NB1 174 aa10.51□□□□□ -0.73
SEMA4D-209ENST00000429836 RSPO3Q9BXY4 272 aaPredicted RBP10.51□□□□□ -0.73
SEMA4D-209ENST00000429836 CHIAQ9BZP6 476 aa10.51□□□□□ -0.73
SEMA4D-209ENST00000429836 CCSER2Q9H7U1 834 aa10.51□□□□□ -0.73
SEMA4D-209ENST00000429836 IL26Q9NPH9 171 aa10.51□□□□□ -0.73
SEMA4D-209ENST00000429836 BRD7Q9NPI1 651 aa10.51□□□□□ -0.73
SEMA4D-209ENST00000429836 NMRK2Q9NPI5 230 aa10.51□□□□□ -0.73
SEMA4D-209ENST00000429836 C1GALT1Q9NS00 363 aa10.51□□□□□ -0.73
SEMA4D-209ENST00000429836 LYARQ9NX58 379 aaKnown RBP10.51□□□□□ -0.73
SEMA4D-209ENST00000429836 NLGN3Q9NZ94 848 aa10.51□□□□□ -0.73
SEMA4D-209ENST00000429836 ADAM30Q9UKF2 790 aa10.51□□□□□ -0.73
SEMA4D-209ENST00000429836 RUVBL1Q9Y265 456 aaKnown RBP10.51□□□□□ -0.73
SEMA4D-209ENST00000429836 MFSD2BA6NFX1 497 aa10.5□□□□□ -0.73
SEMA4D-209ENST00000429836 MGAT4DA6NG13 374 aa10.5□□□□□ -0.73
SEMA4D-209ENST00000429836 SSNA1O43805 119 aa10.5□□□□□ -0.73
SEMA4D-209ENST00000429836 CTSHP09668 335 aa10.5□□□□□ -0.73
SEMA4D-209ENST00000429836 CELP19835 753 aa10.5□□□□□ -0.73
SEMA4D-209ENST00000429836 ELAVL4P26378 380 aaKnown RBP10.5□□□□□ -0.73
SEMA4D-209ENST00000429836 SOAT1P35610 550 aa10.5□□□□□ -0.73
SEMA4D-209ENST00000429836 SELENOPP49908 381 aa10.5□□□□□ -0.73
SEMA4D-209ENST00000429836 SGSHP51688 502 aa10.5□□□□□ -0.73
SEMA4D-209ENST00000429836 RPS26P62854 115 aaKnown RBP10.5□□□□□ -0.73
SEMA4D-209ENST00000429836 PURAQ00577 322 aaKnown RBP10.5□□□□□ -0.73
SEMA4D-209ENST00000429836 IRF8Q02556 426 aa10.5□□□□□ -0.73
SEMA4D-209ENST00000429836 ZNF33BQ06732 778 aa10.5□□□□□ -0.73
SEMA4D-209ENST00000429836 GINS1Q14691 196 aa10.5□□□□□ -0.73
SEMA4D-209ENST00000429836 CHRNA6Q15825 494 aa10.5□□□□□ -0.73
SEMA4D-209ENST00000429836 OCLNQ16625 522 aa10.5□□□□□ -0.73
SEMA4D-209ENST00000429836 ZSWIM7Q19AV6 140 aa10.5□□□□□ -0.73
SEMA4D-209ENST00000429836 PRAMEF19Q5SWL8 479 aa10.5□□□□□ -0.73
SEMA4D-209ENST00000429836 CD276Q5ZPR3 534 aa10.5□□□□□ -0.73
SEMA4D-209ENST00000429836 MZT2AQ6P582 158 aa10.5□□□□□ -0.73
SEMA4D-209ENST00000429836 ATRAIDQ6UW56 229 aa10.5□□□□□ -0.73
SEMA4D-209ENST00000429836 LYPD4Q6UWN0 246 aa10.5□□□□□ -0.73
SEMA4D-209ENST00000429836 RASSF6Q6ZTQ3 369 aa10.5□□□□□ -0.73
SEMA4D-209ENST00000429836 LRRC70Q7Z2Q7 622 aa10.5□□□□□ -0.73
SEMA4D-209ENST00000429836 TECPR1Q7Z6L1 1165 aa10.5□□□□□ -0.73
SEMA4D-209ENST00000429836 LSRQ86X29 649 aaPredicted RBP10.5□□□□□ -0.73
SEMA4D-209ENST00000429836 ZNF687Q8N1G0 1237 aa10.5□□□□□ -0.73
SEMA4D-209ENST00000429836 OR2T4Q8NH00 348 aa10.5□□□□□ -0.73
SEMA4D-209ENST00000429836 FBXO32Q969P5 355 aa10.5□□□□□ -0.73
SEMA4D-209ENST00000429836 MVB12BQ9H7P6 319 aa10.5□□□□□ -0.73
SEMA4D-209ENST00000429836 SEMA3GQ9NS98 782 aa10.5□□□□□ -0.73
SEMA4D-209ENST00000429836 ZSCAN32Q9NX65 697 aa10.5□□□□□ -0.73
SEMA4D-209ENST00000429836 ZNF282Q9UDV7 671 aaPredicted RBP10.5□□□□□ -0.73
SEMA4D-209ENST00000429836 PHF11Q9UIL8 331 aa10.5□□□□□ -0.73
SEMA4D-209ENST00000429836 MBD1Q9UIS9 605 aaPredicted RBP10.5□□□□□ -0.73
SEMA4D-209ENST00000429836 ST3GAL5Q9UNP4 418 aa10.5□□□□□ -0.73
SEMA4D-209ENST00000429836 CLCA2Q9UQC9 943 aa10.5□□□□□ -0.73
SEMA4D-209ENST00000429836 TRPM7Q96QT4 1865 aa10.5□□□□□ -0.73
SEMA4D-209ENST00000429836 LINC01387J3KSC0 135 aa10.5□□□□□ -0.73
SEMA4D-209ENST00000429836 GABRPO00591 440 aa10.5□□□□□ -0.73
SEMA4D-209ENST00000429836 PLATP00750 562 aa10.5□□□□□ -0.73
SEMA4D-209ENST00000429836 TCRBP04435 133 aa10.5□□□□□ -0.73
SEMA4D-209ENST00000429836 HSD3B1P14060 373 aa10.5□□□□□ -0.73
SEMA4D-209ENST00000429836 CBX5P45973 191 aa10.5□□□□□ -0.73
SEMA4D-209ENST00000429836 GAS1P54826 345 aa10.5□□□□□ -0.73
SEMA4D-209ENST00000429836 ERVFC1P60507 584 aa10.5□□□□□ -0.73
SEMA4D-209ENST00000429836 EEF1A2Q05639 463 aaKnown RBP10.5□□□□□ -0.73
SEMA4D-209ENST00000429836 DOC2AQ14183 400 aa10.5□□□□□ -0.73
SEMA4D-209ENST00000429836 SPIN4Q56A73 249 aa10.5□□□□□ -0.73
SEMA4D-209ENST00000429836 XKR6Q5GH73 641 aa10.5□□□□□ -0.73
SEMA4D-209ENST00000429836 DCST1Q5T197 706 aa10.5□□□□□ -0.73
SEMA4D-209ENST00000429836 RNLSQ5VYX0 342 aa10.5□□□□□ -0.73
SEMA4D-209ENST00000429836 SPRYD7Q5W111 196 aa10.5□□□□□ -0.73
SEMA4D-209ENST00000429836 PGBD2Q6P3X8 592 aa10.5□□□□□ -0.73
SEMA4D-209ENST00000429836 MTFR2Q6P444 385 aa10.5□□□□□ -0.73
SEMA4D-209ENST00000429836 TFAP2EQ6VUC0 442 aa10.5□□□□□ -0.73
SEMA4D-209ENST00000429836 C17orf107Q6ZR85 190 aa10.5□□□□□ -0.73
SEMA4D-209ENST00000429836 C16orf59Q7L2K0 433 aa10.5□□□□□ -0.73
SEMA4D-209ENST00000429836 VRK3Q8IV63 474 aa10.5□□□□□ -0.73
SEMA4D-209ENST00000429836 FUBP3Q96I24 572 aaKnown RBP eCLIP10.5□□□□□ -0.73
SEMA4D-209ENST00000429836 USB1Q9BQ65 265 aaKnown RBP10.5□□□□□ -0.73
SEMA4D-209ENST00000429836 MAGEH1Q9H213 219 aa10.5□□□□□ -0.73
SEMA4D-209ENST00000429836 METTL17Q9H7H0 456 aaPredicted RBP10.5□□□□□ -0.73
SEMA4D-209ENST00000429836 SCPEP1Q9HB40 452 aa10.5□□□□□ -0.73
SEMA4D-209ENST00000429836 DNAJC11Q9NVH1 559 aa10.5□□□□□ -0.73
SEMA4D-209ENST00000429836 FAM8A1Q9UBU6 413 aa10.5□□□□□ -0.73
SEMA4D-209ENST00000429836 NDOR1Q9UHB4 597 aa10.5□□□□□ -0.73
SEMA4D-209ENST00000429836 GMEB2Q9UKD1 530 aa10.5□□□□□ -0.73
SEMA4D-209ENST00000429836 CLEC4AQ9UMR7 237 aa10.5□□□□□ -0.73
SEMA4D-209ENST00000429836 CHD5Q8TDI0 1954 aa10.49□□□□□ -0.73
SEMA4D-209ENST00000429836 TRDV1A0A1B0GX56 115 aa10.49□□□□□ -0.73
SEMA4D-209ENST00000429836 G3V3Q6 166 aa10.49□□□□□ -0.73
SEMA4D-209ENST00000429836 CLDN7O95471 211 aa10.49□□□□□ -0.73
SEMA4D-209ENST00000429836 LIMS3P0CW19 117 aa10.49□□□□□ -0.73
SEMA4D-209ENST00000429836 LIMS4P0CW20 117 aa10.49□□□□□ -0.73
SEMA4D-209ENST00000429836 JUPP14923 745 aa10.49□□□□□ -0.73
SEMA4D-209ENST00000429836 AHCYP23526 432 aa10.49□□□□□ -0.73
SEMA4D-209ENST00000429836 ACRV1P26436 265 aa10.49□□□□□ -0.73
SEMA4D-209ENST00000429836 FGF9P31371 208 aaPredicted RBP10.49□□□□□ -0.73
SEMA4D-209ENST00000429836 CCR7P32248 378 aa10.49□□□□□ -0.73
SEMA4D-209ENST00000429836 RPL9P32969 192 aaKnown RBP10.49□□□□□ -0.73
SEMA4D-209ENST00000429836 ZP1P60852 638 aa10.49□□□□□ -0.73
SEMA4D-209ENST00000429836 ATAD1Q8NBU5 361 aa10.49□□□□□ -0.73
SEMA4D-209ENST00000429836 OR52N2Q8NGI0 321 aa10.49□□□□□ -0.73
SEMA4D-209ENST00000429836 RAET1EQ8TD07 263 aa10.49□□□□□ -0.73
SEMA4D-209ENST00000429836 GIMAP1Q8WWP7 306 aa10.49□□□□□ -0.73
SEMA4D-209ENST00000429836 MRPS31Q92665 395 aaKnown RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms