RNA–Protein interactions for RNA: ENST00000429738.1

MRPL28-203, Transcript of mitochondrial ribosomal protein L28, human

TSL 2 BASIC

Gene MRPL28, Length 310 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL28-203	ENST00000429738	TMEM237	Q96Q45	408 aa		16.31	■□□□□ 0.2
MRPL28-203	ENST00000429738	SMC6	Q96SB8	1091 aa		16.31	■□□□□ 0.2
MRPL28-203	ENST00000429738	TMUB1	Q9BVT8	246 aa		16.31	■□□□□ 0.2
MRPL28-203	ENST00000429738	EPB41L4B	Q9H329	900 aa		16.31	■□□□□ 0.2
MRPL28-203	ENST00000429738	ZNF703	Q9H7S9	590 aa	Predicted RBP	16.31	■□□□□ 0.2
MRPL28-203	ENST00000429738	KCNJ16	Q9NPI9	418 aa		16.31	■□□□□ 0.2
MRPL28-203	ENST00000429738	NPDC1	Q9NQX5	325 aa	Predicted RBP	16.31	■□□□□ 0.2
MRPL28-203	ENST00000429738	CNIH4	Q9P003	139 aa		16.31	■□□□□ 0.2
MRPL28-203	ENST00000429738	CNOT11	Q9UKZ1	510 aa	Known RBP	16.31	■□□□□ 0.2
MRPL28-203	ENST00000429738	SNX6	Q9UNH7	406 aa		16.31	■□□□□ 0.2
MRPL28-203	ENST00000429738	SLC12A4	Q9UP95	1085 aa		16.31	■□□□□ 0.2
MRPL28-203	ENST00000429738	PCDHA9	Q9Y5H5	950 aa		16.31	■□□□□ 0.2
MRPL28-203	ENST00000429738	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	16.31	■□□□□ 0.2
MRPL28-203	ENST00000429738	ABCA2	Q9BZC7	2435 aa		16.31	■□□□□ 0.2
MRPL28-203	ENST00000429738	C2orf92	A0A1B0GVN3	265 aa		16.3	■□□□□ 0.2
MRPL28-203	ENST00000429738	C1orf226	A1L170	272 aa		16.3	■□□□□ 0.2
MRPL28-203	ENST00000429738	LRRC3C	A6NJW4	275 aa		16.3	■□□□□ 0.2
MRPL28-203	ENST00000429738	BCKDK	O14874	412 aa		16.3	■□□□□ 0.2
MRPL28-203	ENST00000429738	DLX3	O60479	287 aa		16.3	■□□□□ 0.2
MRPL28-203	ENST00000429738	TOX	O94900	526 aa		16.3	■□□□□ 0.2
MRPL28-203	ENST00000429738	OR4F21	O95013	312 aa		16.3	■□□□□ 0.2
MRPL28-203	ENST00000429738	CELA3A	P09093	270 aa		16.3	■□□□□ 0.2
MRPL28-203	ENST00000429738	FAM153B	P0C7A2	387 aa		16.3	■□□□□ 0.2
MRPL28-203	ENST00000429738	CD99	P14209	185 aa		16.3	■□□□□ 0.2
MRPL28-203	ENST00000429738	CPM	P14384	443 aa		16.3	■□□□□ 0.2
MRPL28-203	ENST00000429738	S1PR1	P21453	382 aa		16.3	■□□□□ 0.2
MRPL28-203	ENST00000429738	SERPINB3	P29508	390 aa		16.3	■□□□□ 0.2
MRPL28-203	ENST00000429738	CHRNB4	P30926	498 aa		16.3	■□□□□ 0.2
MRPL28-203	ENST00000429738	XK	P51811	444 aa		16.3	■□□□□ 0.2
MRPL28-203	ENST00000429738	MAPK12	P53778	367 aa		16.3	■□□□□ 0.2
MRPL28-203	ENST00000429738	TFF3	Q07654	80 aa		16.3	■□□□□ 0.2
MRPL28-203	ENST00000429738	SLC10A1	Q14973	349 aa		16.3	■□□□□ 0.2
MRPL28-203	ENST00000429738	FAM153C	Q494X1	144 aa		16.3	■□□□□ 0.2
MRPL28-203	ENST00000429738	SGO1	Q5FBB7	561 aa		16.3	■□□□□ 0.2
MRPL28-203	ENST00000429738	PRAMEF20	Q5VT98	475 aa		16.3	■□□□□ 0.2
MRPL28-203	ENST00000429738	LRRC25	Q8N386	305 aa	Predicted RBP	16.3	■□□□□ 0.2
MRPL28-203	ENST00000429738	C17orf47	Q8NEP4	570 aa		16.3	■□□□□ 0.2
MRPL28-203	ENST00000429738	MZB1	Q8WU39	189 aa		16.3	■□□□□ 0.2
MRPL28-203	ENST00000429738	ADIPOR1	Q96A54	375 aa		16.3	■□□□□ 0.2
MRPL28-203	ENST00000429738	TM4SF18	Q96CE8	201 aa		16.3	■□□□□ 0.2
MRPL28-203	ENST00000429738	ZNF559	Q9BR84	538 aa		16.3	■□□□□ 0.2
MRPL28-203	ENST00000429738	UCK2	Q9BZX2	261 aa		16.3	■□□□□ 0.2
MRPL28-203	ENST00000429738	OR10A5	Q9H207	317 aa		16.3	■□□□□ 0.2
MRPL28-203	ENST00000429738	PNPLA3	Q9NST1	481 aa		16.3	■□□□□ 0.2
MRPL28-203	ENST00000429738	RNF6	Q9Y252	685 aa		16.3	■□□□□ 0.2
MRPL28-203	ENST00000429738	ZNF469	Q96JG9	3925 aa	Predicted RBP	16.3	■□□□□ 0.2
MRPL28-203	ENST00000429738	ANKRD33B	A6NCL7	494 aa		16.29	■□□□□ 0.2
MRPL28-203	ENST00000429738	NKX2-6	A6NCS4	301 aa		16.29	■□□□□ 0.2
MRPL28-203	ENST00000429738	HCN1	O60741	890 aa		16.29	■□□□□ 0.2
MRPL28-203	ENST00000429738	SUPT7L	O94864	414 aa		16.29	■□□□□ 0.2
MRPL28-203	ENST00000429738	ATP1B1	P05026	303 aa		16.29	■□□□□ 0.2
MRPL28-203	ENST00000429738	RFPL3S	P0C7P2	107 aa		16.29	■□□□□ 0.2
MRPL28-203	ENST00000429738	HSD3B1	P14060	373 aa		16.29	■□□□□ 0.2
MRPL28-203	ENST00000429738	POR	P16435	677 aa	Predicted RBP	16.29	■□□□□ 0.2
MRPL28-203	ENST00000429738	TAC1	P20366	129 aa		16.29	■□□□□ 0.2
MRPL28-203	ENST00000429738	ENDOU	P21128	410 aa	Known RBP	16.29	■□□□□ 0.2
MRPL28-203	ENST00000429738	HSD3B2	P26439	372 aa		16.29	■□□□□ 0.2
MRPL28-203	ENST00000429738	SOX18	P35713	384 aa		16.29	■□□□□ 0.2
MRPL28-203	ENST00000429738	SLC29A2	Q14542	456 aa		16.29	■□□□□ 0.2
MRPL28-203	ENST00000429738	CES4A	Q5XG92	561 aa		16.29	■□□□□ 0.2
MRPL28-203	ENST00000429738	TAGAP	Q8N103	731 aa		16.29	■□□□□ 0.2
MRPL28-203	ENST00000429738	MMP21	Q8N119	569 aa		16.29	■□□□□ 0.2
MRPL28-203	ENST00000429738	ACMSD	Q8TDX5	336 aa		16.29	■□□□□ 0.2
MRPL28-203	ENST00000429738	RND1	Q92730	232 aa		16.29	■□□□□ 0.2
MRPL28-203	ENST00000429738	ZNF382	Q96SR6	550 aa		16.29	■□□□□ 0.2
MRPL28-203	ENST00000429738	ZFP64	Q9NPA5	681 aa		16.29	■□□□□ 0.2
MRPL28-203	ENST00000429738	QPCTL	Q9NXS2	382 aa		16.29	■□□□□ 0.2
MRPL28-203	ENST00000429738	KCNN3	Q9UGI6	736 aa		16.29	■□□□□ 0.2
MRPL28-203	ENST00000429738	BOK	Q9UMX3	212 aa	Predicted RBP	16.29	■□□□□ 0.2
MRPL28-203	ENST00000429738	ARHGAP21	Q5T5U3	1957 aa		16.29	■□□□□ 0.2
MRPL28-203	ENST00000429738	ATP6AP2	A0A1C7CYW4	349 aa		16.28	■□□□□ 0.2
MRPL28-203	ENST00000429738	FAM221A	A4D161	298 aa		16.28	■□□□□ 0.2
MRPL28-203	ENST00000429738	GUCY1B2	O75343	617 aa		16.28	■□□□□ 0.2
MRPL28-203	ENST00000429738	ATP6AP2	O75787	350 aa		16.28	■□□□□ 0.2
MRPL28-203	ENST00000429738	HOXD4	P09016	255 aa	Predicted RBP	16.28	■□□□□ 0.2
MRPL28-203	ENST00000429738	IMPDH1	P20839	514 aa		16.28	■□□□□ 0.2
MRPL28-203	ENST00000429738	ATP5F1	P24539	256 aa	Predicted RBP	16.28	■□□□□ 0.2
MRPL28-203	ENST00000429738	MSX1	P28360	303 aa		16.28	■□□□□ 0.2
MRPL28-203	ENST00000429738	DNAJA1	P31689	397 aa	Known RBP	16.28	■□□□□ 0.2
MRPL28-203	ENST00000429738	MAN2A2	P49641	1150 aa		16.28	■□□□□ 0.2
MRPL28-203	ENST00000429738	NUP107	P57740	925 aa		16.28	■□□□□ 0.2
MRPL28-203	ENST00000429738	TRA2B	P62995	288 aa	Known RBP	16.28	■□□□□ 0.2
MRPL28-203	ENST00000429738	MGAT2	Q10469	447 aa		16.28	■□□□□ 0.2
MRPL28-203	ENST00000429738	MAP4K2	Q12851	820 aa		16.28	■□□□□ 0.2
MRPL28-203	ENST00000429738	RASA2	Q15283	850 aa		16.28	■□□□□ 0.2
MRPL28-203	ENST00000429738	RPS6KA2	Q15349	733 aa		16.28	■□□□□ 0.2
MRPL28-203	ENST00000429738	PRICKLE4	Q2TBC4	344 aa		16.28	■□□□□ 0.2
MRPL28-203	ENST00000429738	TCHHL1	Q5QJ38	904 aa	Predicted RBP	16.28	■□□□□ 0.2
MRPL28-203	ENST00000429738	TEX35	Q5T0J7	233 aa		16.28	■□□□□ 0.2
MRPL28-203	ENST00000429738	RTL6	Q6ICC9	239 aa		16.28	■□□□□ 0.2
MRPL28-203	ENST00000429738	CNPY4	Q8N129	248 aa		16.28	■□□□□ 0.2
MRPL28-203	ENST00000429738	CDYL2	Q8N8U2	506 aa		16.28	■□□□□ 0.2
MRPL28-203	ENST00000429738	FAM13C	Q8NE31	585 aa		16.28	■□□□□ 0.2
MRPL28-203	ENST00000429738	OR7G1	Q8NGA0	311 aa		16.28	■□□□□ 0.2
MRPL28-203	ENST00000429738	NTNG2	Q96CW9	530 aa		16.28	■□□□□ 0.2
MRPL28-203	ENST00000429738	HBEGF	Q99075	208 aa		16.28	■□□□□ 0.2
MRPL28-203	ENST00000429738	ACKR4	Q9NPB9	350 aa		16.28	■□□□□ 0.2
MRPL28-203	ENST00000429738	NMRK1	Q9NWW6	199 aa		16.28	■□□□□ 0.2
MRPL28-203	ENST00000429738	VPS29	Q9UBQ0	182 aa		16.28	■□□□□ 0.2
MRPL28-203	ENST00000429738	ZNF639	Q9UID6	485 aa		16.28	■□□□□ 0.2

Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms