RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 C8orf44Q96CB5 159 aa7.39□□□□□ -1.23
HMGA1P4-201ENST00000428643 LRRC58Q96CX6 371 aa7.39□□□□□ -1.23
HMGA1P4-201ENST00000428643 ELP4Q96EB1 424 aa7.39□□□□□ -1.23
HMGA1P4-201ENST00000428643 FAM120BQ96EK7 910 aaKnown RBP7.39□□□□□ -1.23
HMGA1P4-201ENST00000428643 NAF1Q96HR8 494 aaKnown RBP7.39□□□□□ -1.23
HMGA1P4-201ENST00000428643 FBXL20Q96IG2 436 aa7.39□□□□□ -1.23
HMGA1P4-201ENST00000428643 SLC35G5Q96KT7 338 aa7.39□□□□□ -1.23
HMGA1P4-201ENST00000428643 ART5Q96L15 291 aa7.39□□□□□ -1.23
HMGA1P4-201ENST00000428643 MS4A4EQ96PG1 132 aa7.39□□□□□ -1.23
HMGA1P4-201ENST00000428643 LPAR4Q99677 370 aa7.39□□□□□ -1.23
HMGA1P4-201ENST00000428643 MESP1Q9BRJ9 268 aa7.39□□□□□ -1.23
HMGA1P4-201ENST00000428643 TMEM121BQ9BXQ6 578 aaPredicted RBP7.39□□□□□ -1.23
HMGA1P4-201ENST00000428643 TRIM8Q9BZR9 551 aa7.39□□□□□ -1.23
HMGA1P4-201ENST00000428643 FAM117AQ9C073 453 aa7.39□□□□□ -1.23
HMGA1P4-201ENST00000428643 ANKRA2Q9H9E1 313 aa7.39□□□□□ -1.23
HMGA1P4-201ENST00000428643 C3orf14Q9HBI5 128 aa7.39□□□□□ -1.23
HMGA1P4-201ENST00000428643 SPAG4Q9NPE6 437 aa7.39□□□□□ -1.23
HMGA1P4-201ENST00000428643 SLC6A13Q9NSD5 602 aa7.39□□□□□ -1.23
HMGA1P4-201ENST00000428643 SLC25A37Q9NYZ2 338 aa7.39□□□□□ -1.23
HMGA1P4-201ENST00000428643 MAT2BQ9NZL9 334 aa7.39□□□□□ -1.23
HMGA1P4-201ENST00000428643 VAPAQ9P0L0 249 aa7.39□□□□□ -1.23
HMGA1P4-201ENST00000428643 SLAMF8Q9P0V8 285 aa7.39□□□□□ -1.23
HMGA1P4-201ENST00000428643 PTGFRNQ9P2B2 879 aa7.39□□□□□ -1.23
HMGA1P4-201ENST00000428643 MAP10Q9P2G4 905 aa7.39□□□□□ -1.23
HMGA1P4-201ENST00000428643 COPS7AQ9UBW8 275 aa7.39□□□□□ -1.23
HMGA1P4-201ENST00000428643 IL17BQ9UHF5 180 aa7.39□□□□□ -1.23
HMGA1P4-201ENST00000428643 BCAP29Q9UHQ4 241 aa7.39□□□□□ -1.23
HMGA1P4-201ENST00000428643 FBXL4Q9UKA2 621 aa7.39□□□□□ -1.23
HMGA1P4-201ENST00000428643 WASF3Q9UPY6 502 aa7.39□□□□□ -1.23
HMGA1P4-201ENST00000428643 ERVK-19Q9WJR5 959 aa7.39□□□□□ -1.23
HMGA1P4-201ENST00000428643 MSRB2Q9Y3D2 182 aa7.39□□□□□ -1.23
HMGA1P4-201ENST00000428643 PCDHB14Q9Y5E9 798 aa7.39□□□□□ -1.23
HMGA1P4-201ENST00000428643 HS3ST3B1Q9Y662 390 aa7.39□□□□□ -1.23
HMGA1P4-201ENST00000428643 MRPS18BQ9Y676 258 aaKnown RBP7.39□□□□□ -1.23
HMGA1P4-201ENST00000428643 EPG5Q9HCE0 2579 aa7.38□□□□□ -1.23
HMGA1P4-201ENST00000428643 LOC102723996A0A087X1L8 192 aa7.38□□□□□ -1.23
HMGA1P4-201ENST00000428643 TRBV5-3A0A0A0MS03 114 aa7.38□□□□□ -1.23
HMGA1P4-201ENST00000428643 SAGE2PA6NJ88 616 aa7.38□□□□□ -1.23
HMGA1P4-201ENST00000428643 HRKO00198 91 aa7.38□□□□□ -1.23
HMGA1P4-201ENST00000428643 PEX12O00623 359 aa7.38□□□□□ -1.23
HMGA1P4-201ENST00000428643 TERTO14746 1132 aaKnown RBP7.38□□□□□ -1.23
HMGA1P4-201ENST00000428643 PCDH17O14917 1159 aa7.38□□□□□ -1.23
HMGA1P4-201ENST00000428643 PLOD3O60568 738 aa7.38□□□□□ -1.23
HMGA1P4-201ENST00000428643 PRAMEF2O60811 474 aa7.38□□□□□ -1.23
HMGA1P4-201ENST00000428643 KRT75O95678 551 aa7.38□□□□□ -1.23
HMGA1P4-201ENST00000428643 NPPAP01160 153 aa7.38□□□□□ -1.23
HMGA1P4-201ENST00000428643 CT62P0C5K7 136 aa7.38□□□□□ -1.23
HMGA1P4-201ENST00000428643 ZCCHC18P0CG32 403 aa7.38□□□□□ -1.23
HMGA1P4-201ENST00000428643 PPIBP23284 216 aaKnown RBP7.38□□□□□ -1.23
HMGA1P4-201ENST00000428643 F8A1P23610 371 aa7.38□□□□□ -1.23
HMGA1P4-201ENST00000428643 PTPN6P29350 595 aa7.38□□□□□ -1.23
HMGA1P4-201ENST00000428643 SSTR4P31391 388 aa7.38□□□□□ -1.23
HMGA1P4-201ENST00000428643 GALNSP34059 522 aa7.38□□□□□ -1.23
HMGA1P4-201ENST00000428643 KHKP50053 298 aa7.38□□□□□ -1.23
HMGA1P4-201ENST00000428643 ANXA11P50995 505 aaKnown RBP7.38□□□□□ -1.23
HMGA1P4-201ENST00000428643 PSME3P61289 254 aa7.38□□□□□ -1.23
HMGA1P4-201ENST00000428643 NCALDP61601 193 aa7.38□□□□□ -1.23
HMGA1P4-201ENST00000428643 CLN3Q13286 438 aa7.38□□□□□ -1.23
HMGA1P4-201ENST00000428643 IL10RAQ13651 578 aa7.38□□□□□ -1.23
HMGA1P4-201ENST00000428643 LASP1Q14847 261 aaKnown RBP7.38□□□□□ -1.23
HMGA1P4-201ENST00000428643 EXOSC7Q15024 291 aaKnown RBP7.38□□□□□ -1.23
HMGA1P4-201ENST00000428643 TRMT12Q53H54 448 aaKnown RBP7.38□□□□□ -1.23
HMGA1P4-201ENST00000428643 RABL3Q5HYI8 236 aa7.38□□□□□ -1.23
HMGA1P4-201ENST00000428643 TMEM205Q6UW68 189 aa7.38□□□□□ -1.23
HMGA1P4-201ENST00000428643 BNC2Q6ZN30 1099 aaPredicted RBP7.38□□□□□ -1.23
HMGA1P4-201ENST00000428643 RNF130Q86XS8 419 aa7.38□□□□□ -1.23
HMGA1P4-201ENST00000428643 DEFB107AQ8IZN7 70 aa7.38□□□□□ -1.23
HMGA1P4-201ENST00000428643 PGAM4Q8N0Y7 254 aa7.38□□□□□ -1.23
HMGA1P4-201ENST00000428643 OR2L13Q8N349 312 aa7.38□□□□□ -1.23
HMGA1P4-201ENST00000428643 NUP43Q8NFH3 380 aa7.38□□□□□ -1.23
HMGA1P4-201ENST00000428643 OR52R1Q8NGF1 315 aa7.38□□□□□ -1.23
HMGA1P4-201ENST00000428643 OR8J3Q8NGG0 315 aa7.38□□□□□ -1.23
HMGA1P4-201ENST00000428643 GOT1L1Q8NHS2 421 aaPredicted RBP7.38□□□□□ -1.23
HMGA1P4-201ENST00000428643 PSMA8Q8TAA3 256 aa7.38□□□□□ -1.23
HMGA1P4-201ENST00000428643 SLC2A12Q8TD20 617 aa7.38□□□□□ -1.23
HMGA1P4-201ENST00000428643 PTPMT1Q8WUK0 201 aaPredicted RBP7.38□□□□□ -1.23
HMGA1P4-201ENST00000428643 KCNE4Q8WWG9 221 aa7.38□□□□□ -1.23
HMGA1P4-201ENST00000428643 MCUR1Q96AQ8 359 aa7.38□□□□□ -1.23
HMGA1P4-201ENST00000428643 NEURL3Q96EH8 262 aa7.38□□□□□ -1.23
HMGA1P4-201ENST00000428643 VPS50Q96JG6 964 aa7.38□□□□□ -1.23
HMGA1P4-201ENST00000428643 ANKRD27Q96NW4 1050 aa7.38□□□□□ -1.23
HMGA1P4-201ENST00000428643 SH3GL1Q99961 368 aa7.38□□□□□ -1.23
HMGA1P4-201ENST00000428643 HOPXQ9BPY8 73 aaPredicted RBP7.38□□□□□ -1.23
HMGA1P4-201ENST00000428643 CPPED1Q9BRF8 314 aaPredicted RBP7.38□□□□□ -1.23
HMGA1P4-201ENST00000428643 EFHD1Q9BUP0 239 aa7.38□□□□□ -1.23
HMGA1P4-201ENST00000428643 THUMPD3Q9BV44 507 aaKnown RBP7.38□□□□□ -1.23
HMGA1P4-201ENST00000428643 TRIM4Q9C037 500 aa7.38□□□□□ -1.23
HMGA1P4-201ENST00000428643 LRMDAQ9H2I8 198 aa7.38□□□□□ -1.23
HMGA1P4-201ENST00000428643 RAD21L1Q9H4I0 556 aa7.38□□□□□ -1.23
HMGA1P4-201ENST00000428643 TPT1P8Q9HAU6 139 aa7.38□□□□□ -1.23
HMGA1P4-201ENST00000428643 ADA2Q9NZK5 511 aa7.38□□□□□ -1.23
HMGA1P4-201ENST00000428643 FAF1Q9UNN5 650 aaPredicted RBP7.38□□□□□ -1.23
HMGA1P4-201ENST00000428643 CORO2BQ9UQ03 480 aa7.38□□□□□ -1.23
HMGA1P4-201ENST00000428643 L3MBTL1Q9Y468 752 aa7.38□□□□□ -1.23
HMGA1P4-201ENST00000428643 PCDHGA6Q9Y5G7 932 aa7.38□□□□□ -1.23
HMGA1P4-201ENST00000428643 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.38□□□□□ -1.23
HMGA1P4-201ENST00000428643 NCOR2Q9Y618 2525 aa7.38□□□□□ -1.23
HMGA1P4-201ENST00000428643 CEP295Q9C0D2 2601 aa7.37□□□□□ -1.23
HMGA1P4-201ENST00000428643 A0A087WV62 115 aa7.37□□□□□ -1.23
HMGA1P4-201ENST00000428643 IGHV1-45A0A0A0MS14 117 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms