RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 SPPL2AQ8TCT8 520 aa14.23□□□□□ -0.13
SEC13-210ENST00000428626 DIO2Q92813 273 aa14.23□□□□□ -0.13
SEC13-210ENST00000428626 ATP6V1E2Q96A05 226 aa14.23□□□□□ -0.13
SEC13-210ENST00000428626 PAFAH2Q99487 392 aa14.23□□□□□ -0.13
SEC13-210ENST00000428626 OR10A5Q9H207 317 aa14.23□□□□□ -0.13
SEC13-210ENST00000428626 UBQLN3Q9H347 655 aa14.23□□□□□ -0.13
SEC13-210ENST00000428626 WDR41Q9HAD4 459 aa14.23□□□□□ -0.13
SEC13-210ENST00000428626 QPCTLQ9NXS2 382 aa14.23□□□□□ -0.13
SEC13-210ENST00000428626 KCNN3Q9UGI6 736 aa14.23□□□□□ -0.13
SEC13-210ENST00000428626 NPFFR2Q9Y5X5 522 aa14.23□□□□□ -0.13
SEC13-210ENST00000428626 PRRC2AP48634 2157 aaKnown RBP14.23□□□□□ -0.13
SEC13-210ENST00000428626 MAP1AP78559 2803 aaPredicted RBP14.22□□□□□ -0.13
SEC13-210ENST00000428626 ANKRD33BA6NCL7 494 aa14.22□□□□□ -0.13
SEC13-210ENST00000428626 FOXO6A8MYZ6 492 aa14.22□□□□□ -0.13
SEC13-210ENST00000428626 STX16-NPEPL1H3BU86 382 aa14.22□□□□□ -0.13
SEC13-210ENST00000428626 STX16O14662 325 aa14.22□□□□□ -0.13
SEC13-210ENST00000428626 RPS17P08708 135 aaKnown RBP14.22□□□□□ -0.13
SEC13-210ENST00000428626 CPMP14384 443 aa14.22□□□□□ -0.13
SEC13-210ENST00000428626 PIK3R1P27986 724 aa14.22□□□□□ -0.13
SEC13-210ENST00000428626 PHBP35232 272 aa14.22□□□□□ -0.13
SEC13-210ENST00000428626 ARL1P40616 181 aaPredicted RBP14.22□□□□□ -0.13
SEC13-210ENST00000428626 XKP51811 444 aa14.22□□□□□ -0.13
SEC13-210ENST00000428626 CDH13P55290 713 aa14.22□□□□□ -0.13
SEC13-210ENST00000428626 CRYZQ08257 329 aaKnown RBP14.22□□□□□ -0.13
SEC13-210ENST00000428626 RPS6KA2Q15349 733 aa14.22□□□□□ -0.13
SEC13-210ENST00000428626 RIPPLY2Q5TAB7 128 aa14.22□□□□□ -0.13
SEC13-210ENST00000428626 LETMD1Q6P1Q0 360 aa14.22□□□□□ -0.13
SEC13-210ENST00000428626 POMZP3Q6PJE2 187 aa14.22□□□□□ -0.13
SEC13-210ENST00000428626 FAM111BQ6SJ93 734 aa14.22□□□□□ -0.13
SEC13-210ENST00000428626 COMMD6Q7Z4G1 85 aa14.22□□□□□ -0.13
SEC13-210ENST00000428626 DND1Q8IYX4 353 aaKnown RBP14.22□□□□□ -0.13
SEC13-210ENST00000428626 OR4K14Q8NGD5 310 aa14.22□□□□□ -0.13
SEC13-210ENST00000428626 UHMK1Q8TAS1 419 aaKnown RBP14.22□□□□□ -0.13
SEC13-210ENST00000428626 DCAKDQ8WVC6 231 aa14.22□□□□□ -0.13
SEC13-210ENST00000428626 TP53INP1Q96A56 240 aa14.22□□□□□ -0.13
SEC13-210ENST00000428626 RILPQ96NA2 401 aa14.22□□□□□ -0.13
SEC13-210ENST00000428626 ZNF559Q9BR84 538 aa14.22□□□□□ -0.13
SEC13-210ENST00000428626 NXF5Q9H1B4 397 aaKnown RBP14.22□□□□□ -0.13
SEC13-210ENST00000428626 MPDZO75970 2070 aa14.21□□□□□ -0.13
SEC13-210ENST00000428626 NF1P21359 2839 aa14.21□□□□□ -0.13
SEC13-210ENST00000428626 PDYNP01213 254 aa14.21□□□□□ -0.13
SEC13-210ENST00000428626 RBP1P09455 135 aa14.21□□□□□ -0.13
SEC13-210ENST00000428626 GPX3P22352 226 aa14.21□□□□□ -0.13
SEC13-210ENST00000428626 GDF1P27539 372 aa14.21□□□□□ -0.13
SEC13-210ENST00000428626 CASP3P42574 277 aa14.21□□□□□ -0.13
SEC13-210ENST00000428626 TBL3Q12788 808 aaKnown RBP14.21□□□□□ -0.13
SEC13-210ENST00000428626 MYBPHQ13203 477 aa14.21□□□□□ -0.13
SEC13-210ENST00000428626 NNATQ16517 81 aa14.21□□□□□ -0.13
SEC13-210ENST00000428626 GGTA1PQ4G0N0 100 aa14.21□□□□□ -0.13
SEC13-210ENST00000428626 DCST1Q5T197 706 aa14.21□□□□□ -0.13
SEC13-210ENST00000428626 FAM180BQ6P0A1 224 aa14.21□□□□□ -0.13
SEC13-210ENST00000428626 WDR53Q7Z5U6 358 aaPredicted RBP14.21□□□□□ -0.13
SEC13-210ENST00000428626 TMEM200AQ86VY9 491 aa14.21□□□□□ -0.13
SEC13-210ENST00000428626 TAGAPQ8N103 731 aa14.21□□□□□ -0.13
SEC13-210ENST00000428626 TNIP2Q8NFZ5 429 aa14.21□□□□□ -0.13
SEC13-210ENST00000428626 ZNF483Q8TF39 744 aaPredicted RBP14.21□□□□□ -0.13
SEC13-210ENST00000428626 ZNF597Q96LX8 424 aa14.21□□□□□ -0.13
SEC13-210ENST00000428626 GNRHR2Q96P88 292 aa14.21□□□□□ -0.13
SEC13-210ENST00000428626 HBEGFQ99075 208 aa14.21□□□□□ -0.13
SEC13-210ENST00000428626 TIMP4Q99727 224 aa14.21□□□□□ -0.13
SEC13-210ENST00000428626 ANGPTL4Q9BY76 406 aa14.21□□□□□ -0.13
SEC13-210ENST00000428626 ADAM29Q9UKF5 820 aa14.21□□□□□ -0.13
SEC13-210ENST00000428626 SLC6A5Q9Y345 797 aa14.21□□□□□ -0.13
SEC13-210ENST00000428626 PCDHA9Q9Y5H5 950 aa14.21□□□□□ -0.13
SEC13-210ENST00000428626 ACANP16112 2415 aa14.2□□□□□ -0.14
SEC13-210ENST00000428626 C15orf38-AP3S2A0A0A6YYH1 394 aa14.2□□□□□ -0.14
SEC13-210ENST00000428626 A8MT66 165 aa14.2□□□□□ -0.14
SEC13-210ENST00000428626 TRIM49D1C9J1S8 452 aa14.2□□□□□ -0.14
SEC13-210ENST00000428626 ABCB1P08183 1280 aaPredicted RBP14.2□□□□□ -0.14
SEC13-210ENST00000428626 INHBAP08476 426 aa14.2□□□□□ -0.14
SEC13-210ENST00000428626 GABRA1P14867 456 aa14.2□□□□□ -0.14
SEC13-210ENST00000428626 NT5EP21589 574 aa14.2□□□□□ -0.14
SEC13-210ENST00000428626 ABCD3P28288 659 aa14.2□□□□□ -0.14
SEC13-210ENST00000428626 CDK9P50750 372 aaKnown RBP14.2□□□□□ -0.14
SEC13-210ENST00000428626 CKAP4Q07065 602 aaKnown RBP14.2□□□□□ -0.14
SEC13-210ENST00000428626 EXOSC7Q15024 291 aaKnown RBP14.2□□□□□ -0.14
SEC13-210ENST00000428626 PRICKLE4Q2TBC4 344 aa14.2□□□□□ -0.14
SEC13-210ENST00000428626 SLC25A35Q3KQZ1 300 aa14.2□□□□□ -0.14
SEC13-210ENST00000428626 ACSF3Q4G176 576 aaPredicted RBP14.2□□□□□ -0.14
SEC13-210ENST00000428626 EIPR1Q53HC9 387 aa14.2□□□□□ -0.14
SEC13-210ENST00000428626 TCHHL1Q5QJ38 904 aaPredicted RBP14.2□□□□□ -0.14
SEC13-210ENST00000428626 CCNYL2Q5T2Q4 361 aa14.2□□□□□ -0.14
SEC13-210ENST00000428626 TMEM198Q66K66 360 aa14.2□□□□□ -0.14
SEC13-210ENST00000428626 TTC19Q6DKK2 380 aaPredicted RBP14.2□□□□□ -0.14
SEC13-210ENST00000428626 SLC48A1Q6P1K1 146 aa14.2□□□□□ -0.14
SEC13-210ENST00000428626 MILR1Q7Z6M3 343 aa14.2□□□□□ -0.14
SEC13-210ENST00000428626 CLYBLQ8N0X4 340 aa14.2□□□□□ -0.14
SEC13-210ENST00000428626 MMGT1Q8N4V1 131 aa14.2□□□□□ -0.14
SEC13-210ENST00000428626 TM4SF18Q96CE8 201 aa14.2□□□□□ -0.14
SEC13-210ENST00000428626 SH3GL2Q99962 352 aa14.2□□□□□ -0.14
SEC13-210ENST00000428626 LIME1Q9H400 295 aa14.2□□□□□ -0.14
SEC13-210ENST00000428626 MAT2BQ9NZL9 334 aa14.2□□□□□ -0.14
SEC13-210ENST00000428626 ZNF639Q9UID6 485 aa14.2□□□□□ -0.14
SEC13-210ENST00000428626 SLC12A4Q9UP95 1085 aa14.2□□□□□ -0.14
SEC13-210ENST00000428626 C15orf41Q9Y2V0 281 aa14.2□□□□□ -0.14
SEC13-210ENST00000428626 PCDHGB3Q9Y5G1 929 aa14.2□□□□□ -0.14
SEC13-210ENST00000428626 IKBKGQ9Y6K9 419 aa14.2□□□□□ -0.14
SEC13-210ENST00000428626 ABCA4P78363 2273 aa14.2□□□□□ -0.14
SEC13-210ENST00000428626 POC1B-GALNT4F8VUJ3 575 aa14.19□□□□□ -0.14
SEC13-210ENST00000428626 TP53I11O14683 189 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms